RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 SHANK3Q9BYB0 1731 aa22.67■■□□□ 1.22
COLCA2-206ENST00000638573 CGNL1Q0VF96 1302 aa22.66■■□□□ 1.22
COLCA2-206ENST00000638573 LRRC4BQ9NT99 713 aa22.66■■□□□ 1.22
COLCA2-206ENST00000638573 PRIM1P49642 420 aaKnown RBP22.65■■□□□ 1.22
COLCA2-206ENST00000638573 SYTL4Q96C24 671 aaPredicted RBP22.65■■□□□ 1.22
COLCA2-206ENST00000638573 BTAF1O14981 1849 aa22.65■■□□□ 1.22
COLCA2-206ENST00000638573 NSD2O96028 1365 aa22.64■■□□□ 1.22
COLCA2-206ENST00000638573 POLKQ9UBT6 870 aa22.64■■□□□ 1.21
COLCA2-206ENST00000638573 SMG6Q86US8 1419 aaKnown RBP22.64■■□□□ 1.21
COLCA2-206ENST00000638573 ZBTB7AO95365 584 aa22.63■■□□□ 1.21
COLCA2-206ENST00000638573 ZEB1P37275 1124 aaPredicted RBP22.63■■□□□ 1.21
COLCA2-206ENST00000638573 ZNF827Q17R98 1081 aa22.63■■□□□ 1.21
COLCA2-206ENST00000638573 DOT1LQ8TEK3 1739 aa22.61■■□□□ 1.21
COLCA2-206ENST00000638573 RAPGEF4Q8WZA2 1011 aa22.61■■□□□ 1.21
COLCA2-206ENST00000638573 CASZ1Q86V15 1759 aa22.61■■□□□ 1.21
COLCA2-206ENST00000638573 SLC15A2Q16348 729 aa22.6■■□□□ 1.21
COLCA2-206ENST00000638573 STK32BQ9NY57 414 aa22.6■■□□□ 1.21
COLCA2-206ENST00000638573 TATP17735 454 aaPredicted RBP22.59■■□□□ 1.21
COLCA2-206ENST00000638573 SPON1Q9HCB6 807 aa22.59■■□□□ 1.21
COLCA2-206ENST00000638573 ATF5Q9Y2D1 282 aaPredicted RBP22.59■■□□□ 1.21
COLCA2-206ENST00000638573 PAPPAQ13219 1627 aa22.59■■□□□ 1.21
COLCA2-206ENST00000638573 KIF24Q5T7B8 1368 aa22.59■■□□□ 1.21
COLCA2-206ENST00000638573 WASHC2AQ641Q2 1341 aa22.58■■□□□ 1.21
COLCA2-206ENST00000638573 CYP27B1O15528 508 aa22.58■■□□□ 1.21
COLCA2-206ENST00000638573 EYA1Q99502 592 aa22.58■■□□□ 1.21
COLCA2-206ENST00000638573 ANKRD26Q9UPS8 1709 aa22.57■■□□□ 1.2
COLCA2-206ENST00000638573 KIF7Q2M1P5 1343 aa22.57■■□□□ 1.2
COLCA2-206ENST00000638573 EIF4A2Q14240 407 aaKnown RBP22.56■■□□□ 1.2
COLCA2-206ENST00000638573 NCAPD2Q15021 1401 aa22.56■■□□□ 1.2
COLCA2-206ENST00000638573 PTGER2P43116 358 aa22.54■■□□□ 1.2
COLCA2-206ENST00000638573 KAT6BQ8WYB5 2073 aa22.54■■□□□ 1.2
COLCA2-206ENST00000638573 PPP1R1BQ9UD71 204 aaPredicted RBP22.53■■□□□ 1.2
COLCA2-206ENST00000638573 PCDH11XQ9BZA7 1347 aa22.52■■□□□ 1.2
COLCA2-206ENST00000638573 PCDH11YQ9BZA8 1340 aa22.52■■□□□ 1.2
COLCA2-206ENST00000638573 MAP2P11137 1827 aaKnown RBP22.52■■□□□ 1.2
COLCA2-206ENST00000638573 AKT1S1Q96B36 256 aa22.51■■□□□ 1.19
COLCA2-206ENST00000638573 TOGARAM1Q9Y4F4 1720 aa22.5■■□□□ 1.19
COLCA2-206ENST00000638573 MORC1Q86VD1 984 aa22.49■■□□□ 1.19
COLCA2-206ENST00000638573 MPRIPQ6WCQ1 1025 aa22.48■■□□□ 1.19
COLCA2-206ENST00000638573 AMER1Q5JTC6 1135 aaPredicted RBP22.47■■□□□ 1.19
COLCA2-206ENST00000638573 CCNL1Q9UK58 526 aaPredicted RBP22.47■■□□□ 1.19
COLCA2-206ENST00000638573 PKD1L3Q7Z443 1732 aa22.47■■□□□ 1.19
COLCA2-206ENST00000638573 CNGB1Q14028 1251 aaPredicted RBP22.46■■□□□ 1.19
COLCA2-206ENST00000638573 SLC27A3Q5K4L6 730 aa22.46■■□□□ 1.19
COLCA2-206ENST00000638573 AEBP1Q8IUX7 1158 aa22.46■■□□□ 1.19
COLCA2-206ENST00000638573 SGIP1Q9BQI5 828 aa22.46■■□□□ 1.19
COLCA2-206ENST00000638573 KNSTRNQ9Y448 316 aa22.46■■□□□ 1.19
COLCA2-206ENST00000638573 PNPLA7Q6ZV29 1317 aa22.46■■□□□ 1.19
COLCA2-206ENST00000638573 SMIM5Q71RC9 77 aa22.44■■□□□ 1.18
COLCA2-206ENST00000638573 IGSF1Q8N6C5 1336 aa22.44■■□□□ 1.18
COLCA2-206ENST00000638573 PIGBQ92521 554 aa22.44■■□□□ 1.18
COLCA2-206ENST00000638573 MTFR1LQ9H019 292 aa22.44■■□□□ 1.18
COLCA2-206ENST00000638573 LY75O60449 1722 aa22.43■■□□□ 1.18
COLCA2-206ENST00000638573 PALLDQ8WX93 1383 aa22.43■■□□□ 1.18
COLCA2-206ENST00000638573 TFCP2L1Q9NZI6 479 aa22.42■■□□□ 1.18
COLCA2-206ENST00000638573 SPG7Q9UQ90 795 aa22.42■■□□□ 1.18
COLCA2-206ENST00000638573 TUBGCP6Q96RT7 1819 aa22.41■■□□□ 1.18
COLCA2-206ENST00000638573 PHKG2P15735 406 aa22.41■■□□□ 1.18
COLCA2-206ENST00000638573 NKX1-1Q15270 411 aaPredicted RBP22.41■■□□□ 1.18
COLCA2-206ENST00000638573 CC2D1BQ5T0F9 858 aaKnown RBP22.41■■□□□ 1.18
COLCA2-206ENST00000638573 AMIGO3Q86WK7 504 aa22.41■■□□□ 1.18
COLCA2-206ENST00000638573 PER1O15534 1290 aaPredicted RBP22.4■■□□□ 1.18
COLCA2-206ENST00000638573 FHDC1Q9C0D6 1143 aaPredicted RBP22.4■■□□□ 1.18
COLCA2-206ENST00000638573 ASAP1Q9ULH1 1129 aa22.38■■□□□ 1.17
COLCA2-206ENST00000638573 COL23A1Q86Y22 540 aaPredicted RBP22.37■■□□□ 1.17
COLCA2-206ENST00000638573 IL13P35225 146 aa22.36■■□□□ 1.17
COLCA2-206ENST00000638573 MSL1Q68DK7 614 aa22.36■■□□□ 1.17
COLCA2-206ENST00000638573 IFNL2Q8IZJ0 200 aa22.36■■□□□ 1.17
COLCA2-206ENST00000638573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.36■■□□□ 1.17
COLCA2-206ENST00000638573 ITGB4P16144 1822 aa22.36■■□□□ 1.17
COLCA2-206ENST00000638573 MTHFSP49914 203 aa22.35■■□□□ 1.17
COLCA2-206ENST00000638573 ARXQ96QS3 562 aa22.35■■□□□ 1.17
COLCA2-206ENST00000638573 SYT17Q9BSW7 474 aa22.35■■□□□ 1.17
COLCA2-206ENST00000638573 MSH5O43196 834 aa22.34■■□□□ 1.17
COLCA2-206ENST00000638573 SULT6B1Q6IMI4 303 aa22.34■■□□□ 1.17
COLCA2-206ENST00000638573 KDM6AO15550 1401 aaPredicted RBP22.33■■□□□ 1.17
COLCA2-206ENST00000638573 ZNF530Q6P9A1 599 aaPredicted RBP22.33■■□□□ 1.17
COLCA2-206ENST00000638573 TMOD3Q9NYL9 352 aa22.33■■□□□ 1.17
COLCA2-206ENST00000638573 ITPK1Q13572 414 aa22.32■■□□□ 1.16
COLCA2-206ENST00000638573 KLHL34Q8N239 644 aa22.32■■□□□ 1.16
COLCA2-206ENST00000638573 LINC00116Q8NCU8 138 aa22.32■■□□□ 1.16
COLCA2-206ENST00000638573 ATG3Q9NT62 314 aa22.32■■□□□ 1.16
COLCA2-206ENST00000638573 C5P01031 1676 aa22.32■■□□□ 1.16
COLCA2-206ENST00000638573 LOC102724428A0A0B4J2F2 783 aa22.3■■□□□ 1.16
COLCA2-206ENST00000638573 PHF14O94880 888 aa22.3■■□□□ 1.16
COLCA2-206ENST00000638573 HMOX1P09601 288 aa22.3■■□□□ 1.16
COLCA2-206ENST00000638573 SIK1P57059 783 aa22.3■■□□□ 1.16
COLCA2-206ENST00000638573 QSER1Q2KHR3 1735 aa22.29■■□□□ 1.16
COLCA2-206ENST00000638573 PLEKHO1Q53GL0 409 aaPredicted RBP22.29■■□□□ 1.16
COLCA2-206ENST00000638573 SMARCC1Q92922 1105 aaPredicted RBP22.29■■□□□ 1.16
COLCA2-206ENST00000638573 SLC4A9Q96Q91 983 aa22.29■■□□□ 1.16
COLCA2-206ENST00000638573 C4BP0C0L5 1744 aa22.27■■□□□ 1.16
COLCA2-206ENST00000638573 SLC16A10Q8TF71 515 aa22.27■■□□□ 1.16
COLCA2-206ENST00000638573 KDRP35968 1356 aa22.26■■□□□ 1.15
COLCA2-206ENST00000638573 NLGN2Q8NFZ4 835 aa22.26■■□□□ 1.15
COLCA2-206ENST00000638573 TAF1LQ8IZX4 1826 aa22.26■■□□□ 1.15
COLCA2-206ENST00000638573 AK7Q96M32 723 aa22.25■■□□□ 1.15
COLCA2-206ENST00000638573 ATP6V1AP38606 617 aa22.24■■□□□ 1.15
COLCA2-206ENST00000638573 DCAF5Q96JK2 942 aa22.24■■□□□ 1.15
COLCA2-206ENST00000638573 YY1P25490 414 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms