RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 KRT24Q2M2I5 525 aa21■□□□□ 0.95
CTSD-213ENST00000637915 RTF1Q92541 710 aaKnown RBP21■□□□□ 0.95
CTSD-213ENST00000637915 ORAI2Q96SN7 254 aa21■□□□□ 0.95
CTSD-213ENST00000637915 PHRF1Q9P1Y6 1649 aaKnown RBP20.99■□□□□ 0.95
CTSD-213ENST00000637915 HAP1P54257 671 aaPredicted RBP20.99■□□□□ 0.95
CTSD-213ENST00000637915 ZBTB7BO15156 539 aaPredicted RBP20.98■□□□□ 0.95
CTSD-213ENST00000637915 LTV1Q96GA3 475 aaPredicted RBP20.98■□□□□ 0.95
CTSD-213ENST00000637915 PROSER2Q86WR7 435 aaPredicted RBP20.97■□□□□ 0.95
CTSD-213ENST00000637915 IP6K1Q92551 441 aa20.97■□□□□ 0.95
CTSD-213ENST00000637915 API5Q9BZZ5 524 aaKnown RBP20.97■□□□□ 0.95
CTSD-213ENST00000637915 SMC5Q8IY18 1101 aa20.97■□□□□ 0.95
CTSD-213ENST00000637915 HTATSF1O43719 755 aaKnown RBP20.96■□□□□ 0.95
CTSD-213ENST00000637915 KCNH5Q8NCM2 988 aa20.96■□□□□ 0.95
CTSD-213ENST00000637915 CHMP4BQ9H444 224 aaKnown RBP20.96■□□□□ 0.95
CTSD-213ENST00000637915 TRPM3Q9HCF6 1732 aaPredicted RBP20.96■□□□□ 0.95
CTSD-213ENST00000637915 MIS18AQ9NYP9 233 aa20.95■□□□□ 0.94
CTSD-213ENST00000637915 KIF1AQ12756 1690 aa20.95■□□□□ 0.94
CTSD-213ENST00000637915 SLIT3O75094 1523 aa20.95■□□□□ 0.94
CTSD-213ENST00000637915 TSPYL4Q9UJ04 414 aa20.94■□□□□ 0.94
CTSD-213ENST00000637915 GNAT3A8MTJ3 354 aa20.94■□□□□ 0.94
CTSD-213ENST00000637915 RGS12O14924 1447 aa20.93■□□□□ 0.94
CTSD-213ENST00000637915 C1orf167Q5SNV9 1468 aa20.93■□□□□ 0.94
CTSD-213ENST00000637915 XPCQ01831 940 aaPredicted RBP20.93■□□□□ 0.94
CTSD-213ENST00000637915 MSH6P52701 1360 aa20.93■□□□□ 0.94
CTSD-213ENST00000637915 MAP3K5Q99683 1374 aa20.93■□□□□ 0.94
CTSD-213ENST00000637915 USHBP1Q8N6Y0 703 aa20.92■□□□□ 0.94
CTSD-213ENST00000637915 DDRGK1Q96HY6 314 aa20.92■□□□□ 0.94
CTSD-213ENST00000637915 C19orf44Q9H6X5 657 aa20.92■□□□□ 0.94
CTSD-213ENST00000637915 STRCP1A6NGW2 1772 aa20.91■□□□□ 0.94
CTSD-213ENST00000637915 RGPD2P0DJD1 1756 aa20.9■□□□□ 0.94
CTSD-213ENST00000637915 NBPF6Q5VWK0 638 aa20.9■□□□□ 0.94
CTSD-213ENST00000637915 NBPF4Q96M43 638 aa20.9■□□□□ 0.94
CTSD-213ENST00000637915 C1orf115Q9H7X2 142 aa20.9■□□□□ 0.94
CTSD-213ENST00000637915 GCP02774 474 aa20.89■□□□□ 0.93
CTSD-213ENST00000637915 PTPRCP08575 1304 aa20.89■□□□□ 0.93
CTSD-213ENST00000637915 ZBTB7CA1YPR0 619 aa20.88■□□□□ 0.93
CTSD-213ENST00000637915 INTS3Q68E01 1043 aaKnown RBP20.88■□□□□ 0.93
CTSD-213ENST00000637915 USP19O94966 1318 aa20.88■□□□□ 0.93
CTSD-213ENST00000637915 SEC24BO95487 1268 aa20.88■□□□□ 0.93
CTSD-213ENST00000637915 IL17REQ8NFR9 667 aa20.88■□□□□ 0.93
CTSD-213ENST00000637915 NUCB1Q02818 461 aa20.87■□□□□ 0.93
CTSD-213ENST00000637915 KRT28Q7Z3Y7 464 aa20.87■□□□□ 0.93
CTSD-213ENST00000637915 ARHGEF25Q86VW2 580 aa20.87■□□□□ 0.93
CTSD-213ENST00000637915 TMEM94Q12767 1356 aa20.86■□□□□ 0.93
CTSD-213ENST00000637915 ALS2Q96Q42 1657 aa20.86■□□□□ 0.93
CTSD-213ENST00000637915 SLC4A2P04920 1241 aa20.86■□□□□ 0.93
CTSD-213ENST00000637915 SIRT2Q8IXJ6 389 aa20.86■□□□□ 0.93
CTSD-213ENST00000637915 MST1RQ04912 1400 aa20.86■□□□□ 0.93
CTSD-213ENST00000637915 LMOD2Q6P5Q4 547 aa20.85■□□□□ 0.93
CTSD-213ENST00000637915 FAM208AQ9UK61 1670 aaKnown RBP20.85■□□□□ 0.93
CTSD-213ENST00000637915 DCCP43146 1447 aa20.84■□□□□ 0.93
CTSD-213ENST00000637915 LRRC59Q96AG4 307 aaKnown RBP20.84■□□□□ 0.93
CTSD-213ENST00000637915 GCC1Q96CN9 775 aa20.84■□□□□ 0.93
CTSD-213ENST00000637915 NCAPD2Q15021 1401 aa20.83■□□□□ 0.93
CTSD-213ENST00000637915 CHD1LQ86WJ1 897 aa20.83■□□□□ 0.93
CTSD-213ENST00000637915 BABAM1Q9NWV8 329 aa20.83■□□□□ 0.93
CTSD-213ENST00000637915 MED1Q15648 1581 aaPredicted RBP20.83■□□□□ 0.93
CTSD-213ENST00000637915 PLEKHG5O94827 1062 aa20.83■□□□□ 0.92
CTSD-213ENST00000637915 TAF7Q15545 349 aaPredicted RBP20.83■□□□□ 0.92
CTSD-213ENST00000637915 CEMIPQ8WUJ3 1361 aa20.83■□□□□ 0.92
CTSD-213ENST00000637915 NCOA3Q9Y6Q9 1424 aa20.82■□□□□ 0.92
CTSD-213ENST00000637915 LMO7Q8WWI1 1683 aa20.82■□□□□ 0.92
CTSD-213ENST00000637915 CAMTA1Q9Y6Y1 1673 aa20.82■□□□□ 0.92
CTSD-213ENST00000637915 ATF3P18847 181 aa20.82■□□□□ 0.92
CTSD-213ENST00000637915 LNPKQ9C0E8 428 aa20.81■□□□□ 0.92
CTSD-213ENST00000637915 G2E3Q7L622 706 aa20.81■□□□□ 0.92
CTSD-213ENST00000637915 ATP10DQ9P241 1426 aa20.8■□□□□ 0.92
CTSD-213ENST00000637915 SOS1Q07889 1333 aaPredicted RBP20.8■□□□□ 0.92
CTSD-213ENST00000637915 ANKRD24Q8TF21 1146 aa20.79■□□□□ 0.92
CTSD-213ENST00000637915 HSPA2P54652 639 aa20.78■□□□□ 0.92
CTSD-213ENST00000637915 ANKRD45Q5TZF3 282 aa20.78■□□□□ 0.92
CTSD-213ENST00000637915 STK31Q9BXU1 1019 aa20.78■□□□□ 0.92
CTSD-213ENST00000637915 RGPD5Q99666 1765 aa20.78■□□□□ 0.92
CTSD-213ENST00000637915 CCDC30Q5VVM6 783 aa20.77■□□□□ 0.92
CTSD-213ENST00000637915 AXIN2Q9Y2T1 843 aa20.77■□□□□ 0.92
CTSD-213ENST00000637915 KDM3BQ7LBC6 1761 aa20.77■□□□□ 0.92
CTSD-213ENST00000637915 KDM4FA0A1W2PPD8 638 aa20.76■□□□□ 0.91
CTSD-213ENST00000637915 LGR6Q9HBX8 967 aa20.76■□□□□ 0.91
CTSD-213ENST00000637915 SLC4A3P48751 1232 aa20.76■□□□□ 0.91
CTSD-213ENST00000637915 PLEKHO1Q53GL0 409 aaPredicted RBP20.76■□□□□ 0.91
CTSD-213ENST00000637915 AKAP4Q5JQC9 854 aa20.76■□□□□ 0.91
CTSD-213ENST00000637915 ANKRD44Q8N8A2 993 aa20.76■□□□□ 0.91
CTSD-213ENST00000637915 MEIS3Q99687 375 aa20.76■□□□□ 0.91
CTSD-213ENST00000637915 UPF2Q9HAU5 1272 aaKnown RBP20.76■□□□□ 0.91
CTSD-213ENST00000637915 CACNA1FO60840 1977 aa20.75■□□□□ 0.91
CTSD-213ENST00000637915 PXDNQ92626 1479 aa20.75■□□□□ 0.91
CTSD-213ENST00000637915 F6X3S4 739 aa20.75■□□□□ 0.91
CTSD-213ENST00000637915 ZNF530Q6P9A1 599 aaPredicted RBP20.75■□□□□ 0.91
CTSD-213ENST00000637915 DDX17Q92841 729 aaKnown RBP20.75■□□□□ 0.91
CTSD-213ENST00000637915 AMOTQ4VCS5 1084 aa20.74■□□□□ 0.91
CTSD-213ENST00000637915 CADPS2Q86UW7 1296 aa20.74■□□□□ 0.91
CTSD-213ENST00000637915 TBC1D32Q96NH3 1257 aa20.74■□□□□ 0.91
CTSD-213ENST00000637915 CCT4P50991 539 aaKnown RBP20.74■□□□□ 0.91
CTSD-213ENST00000637915 FLIIQ13045 1269 aa20.74■□□□□ 0.91
CTSD-213ENST00000637915 CEP85Q6P2H3 762 aa20.74■□□□□ 0.91
CTSD-213ENST00000637915 RPAP2Q8IXW5 612 aaPredicted RBP20.74■□□□□ 0.91
CTSD-213ENST00000637915 DCTPP1Q9H773 170 aa20.74■□□□□ 0.91
CTSD-213ENST00000637915 XIRP1Q702N8 1843 aaKnown RBP20.73■□□□□ 0.91
CTSD-213ENST00000637915 NBR1Q14596 966 aa20.73■□□□□ 0.91
CTSD-213ENST00000637915 SLC4A10Q6U841 1118 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms