RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 RGS12O14924 1447 aa23.32■■□□□ 1.32
CTSD-212ENST00000637815 TBC1D32Q96NH3 1257 aa23.32■■□□□ 1.32
CTSD-212ENST00000637815 HOXC9P31274 260 aa23.32■■□□□ 1.32
CTSD-212ENST00000637815 GCC1Q96CN9 775 aa23.32■■□□□ 1.32
CTSD-212ENST00000637815 ADGRL3Q9HAR2 1447 aa23.31■■□□□ 1.32
CTSD-212ENST00000637815 GAS2L2Q8NHY3 880 aa23.31■■□□□ 1.32
CTSD-212ENST00000637815 KRT24Q2M2I5 525 aa23.3■■□□□ 1.32
CTSD-212ENST00000637815 RTL1A6NKG5 1358 aa23.3■■□□□ 1.32
CTSD-212ENST00000637815 FOXO3O43524 673 aa23.3■■□□□ 1.32
CTSD-212ENST00000637815 INTS3Q68E01 1043 aaKnown RBP23.3■■□□□ 1.32
CTSD-212ENST00000637815 CHD1LQ86WJ1 897 aa23.3■■□□□ 1.32
CTSD-212ENST00000637815 ABTB2Q8N961 1025 aa23.3■■□□□ 1.32
CTSD-212ENST00000637815 PHF8Q9UPP1 1060 aa23.3■■□□□ 1.32
CTSD-212ENST00000637815 RTF1Q92541 710 aaKnown RBP23.29■■□□□ 1.32
CTSD-212ENST00000637815 HTATSF1O43719 755 aaKnown RBP23.28■■□□□ 1.32
CTSD-212ENST00000637815 SIRT2Q8IXJ6 389 aa23.28■■□□□ 1.32
CTSD-212ENST00000637815 C1orf115Q9H7X2 142 aa23.28■■□□□ 1.32
CTSD-212ENST00000637815 CACNA1FO60840 1977 aa23.27■■□□□ 1.32
CTSD-212ENST00000637815 PHRF1Q9P1Y6 1649 aaKnown RBP23.27■■□□□ 1.32
CTSD-212ENST00000637815 NFAT5O94916 1531 aa23.27■■□□□ 1.32
CTSD-212ENST00000637815 PTPRCP08575 1304 aa23.27■■□□□ 1.32
CTSD-212ENST00000637815 NUTM2GQ5VZR2 741 aa23.26■■□□□ 1.31
CTSD-212ENST00000637815 LNPKQ9C0E8 428 aa23.26■■□□□ 1.31
CTSD-212ENST00000637815 DEKP35659 375 aaKnown RBP23.25■■□□□ 1.31
CTSD-212ENST00000637815 BECN1Q14457 450 aa23.24■■□□□ 1.31
CTSD-212ENST00000637815 NPHP4O75161 1426 aaPredicted RBP23.24■■□□□ 1.31
CTSD-212ENST00000637815 TSPYL4Q9UJ04 414 aa23.23■■□□□ 1.31
CTSD-212ENST00000637815 FAM208AQ9UK61 1670 aaKnown RBP23.23■■□□□ 1.31
CTSD-212ENST00000637815 ATP10DQ9P241 1426 aa23.21■■□□□ 1.31
CTSD-212ENST00000637815 GNAT3A8MTJ3 354 aa23.21■■□□□ 1.31
CTSD-212ENST00000637815 ANKRD45Q5TZF3 282 aa23.21■■□□□ 1.31
CTSD-212ENST00000637815 MIS18AQ9NYP9 233 aa23.21■■□□□ 1.31
CTSD-212ENST00000637815 BMP2KLQ5H9B9 411 aa23.2■■□□□ 1.3
CTSD-212ENST00000637815 MAP3K5Q99683 1374 aa23.2■■□□□ 1.3
CTSD-212ENST00000637815 MSH6P52701 1360 aa23.19■■□□□ 1.3
CTSD-212ENST00000637815 N4BP2Q86UW6 1770 aaPredicted RBP23.18■■□□□ 1.3
CTSD-212ENST00000637815 SLC4A2P04920 1241 aa23.18■■□□□ 1.3
CTSD-212ENST00000637815 NFKBIBQ15653 356 aa23.18■■□□□ 1.3
CTSD-212ENST00000637815 IP6K1Q92551 441 aa23.18■■□□□ 1.3
CTSD-212ENST00000637815 RBM33Q96EV2 1170 aaKnown RBP23.18■■□□□ 1.3
CTSD-212ENST00000637815 C14orf37Q86TY3 774 aa23.17■■□□□ 1.3
CTSD-212ENST00000637815 C22orf23Q9BZE7 217 aa23.17■■□□□ 1.3
CTSD-212ENST00000637815 RGPD2P0DJD1 1756 aa23.17■■□□□ 1.3
CTSD-212ENST00000637815 ANKRD44Q8N8A2 993 aa23.16■■□□□ 1.3
CTSD-212ENST00000637815 BABAM1Q9NWV8 329 aa23.16■■□□□ 1.3
CTSD-212ENST00000637815 MFAP1P55081 439 aaKnown RBP23.16■■□□□ 1.3
CTSD-212ENST00000637815 ESCO1Q5FWF5 840 aa23.16■■□□□ 1.3
CTSD-212ENST00000637815 DCTPP1Q9H773 170 aa23.16■■□□□ 1.3
CTSD-212ENST00000637815 SOS1Q07889 1333 aaPredicted RBP23.16■■□□□ 1.3
CTSD-212ENST00000637815 PSME1Q06323 249 aa23.15■■□□□ 1.3
CTSD-212ENST00000637815 RPAP2Q8IXW5 612 aaPredicted RBP23.15■■□□□ 1.3
CTSD-212ENST00000637815 KCNH5Q8NCM2 988 aa23.15■■□□□ 1.3
CTSD-212ENST00000637815 SLIT3O75094 1523 aa23.14■■□□□ 1.3
CTSD-212ENST00000637815 IL17REQ8NFR9 667 aa23.14■■□□□ 1.29
CTSD-212ENST00000637815 LTV1Q96GA3 475 aaPredicted RBP23.14■■□□□ 1.29
CTSD-212ENST00000637815 TRPM3Q9HCF6 1732 aaPredicted RBP23.14■■□□□ 1.29
CTSD-212ENST00000637815 MED1Q15648 1581 aaPredicted RBP23.13■■□□□ 1.29
CTSD-212ENST00000637815 CEP85Q6P2H3 762 aa23.13■■□□□ 1.29
CTSD-212ENST00000637815 LMO7Q8WWI1 1683 aa23.12■■□□□ 1.29
CTSD-212ENST00000637815 TBC1D2Q9BYX2 928 aa23.12■■□□□ 1.29
CTSD-212ENST00000637815 G2E3Q7L622 706 aa23.11■■□□□ 1.29
CTSD-212ENST00000637815 KIF1AQ12756 1690 aa23.11■■□□□ 1.29
CTSD-212ENST00000637815 MEIS3Q99687 375 aa23.11■■□□□ 1.29
CTSD-212ENST00000637815 CEMIPQ8WUJ3 1361 aa23.1■■□□□ 1.29
CTSD-212ENST00000637815 KDM3BQ7LBC6 1761 aa23.1■■□□□ 1.29
CTSD-212ENST00000637815 CCT4P50991 539 aaKnown RBP23.1■■□□□ 1.29
CTSD-212ENST00000637815 TAF7Q15545 349 aaPredicted RBP23.1■■□□□ 1.29
CTSD-212ENST00000637815 RBM25P49756 843 aaKnown RBP23.09■■□□□ 1.29
CTSD-212ENST00000637815 STK31Q9BXU1 1019 aa23.09■■□□□ 1.29
CTSD-212ENST00000637815 CCDC30Q5VVM6 783 aa23.09■■□□□ 1.29
CTSD-212ENST00000637815 USHBP1Q8N6Y0 703 aa23.09■■□□□ 1.29
CTSD-212ENST00000637815 NCAPD2Q15021 1401 aa23.08■■□□□ 1.29
CTSD-212ENST00000637815 CAMTA1Q9Y6Y1 1673 aa23.08■■□□□ 1.28
CTSD-212ENST00000637815 NBPF6Q5VWK0 638 aa23.08■■□□□ 1.28
CTSD-212ENST00000637815 NBPF4Q96M43 638 aa23.08■■□□□ 1.28
CTSD-212ENST00000637815 ANTXR1Q9H6X2 564 aa23.08■■□□□ 1.28
CTSD-212ENST00000637815 PLEKHM2Q8IWE5 1019 aa23.06■■□□□ 1.28
CTSD-212ENST00000637815 ORAI2Q96SN7 254 aa23.06■■□□□ 1.28
CTSD-212ENST00000637815 F6X3S4 739 aa23.05■■□□□ 1.28
CTSD-212ENST00000637815 PXDNLA1KZ92 1463 aa23.05■■□□□ 1.28
CTSD-212ENST00000637815 FLIIQ13045 1269 aa23.04■■□□□ 1.28
CTSD-212ENST00000637815 MST1RQ04912 1400 aa23.04■■□□□ 1.28
CTSD-212ENST00000637815 SLC4A10Q6U841 1118 aa23.03■■□□□ 1.28
CTSD-212ENST00000637815 TBC1D9Q6ZT07 1266 aa23.03■■□□□ 1.28
CTSD-212ENST00000637815 ARHGEF25Q86VW2 580 aa23.03■■□□□ 1.28
CTSD-212ENST00000637815 GCP02774 474 aa23.03■■□□□ 1.28
CTSD-212ENST00000637815 ALS2Q96Q42 1657 aa23.02■■□□□ 1.28
CTSD-212ENST00000637815 FRAT2O75474 233 aaPredicted RBP23.02■■□□□ 1.28
CTSD-212ENST00000637815 GSPT1P15170 499 aaKnown RBP23.02■■□□□ 1.28
CTSD-212ENST00000637815 C1orf167Q5SNV9 1468 aa23.02■■□□□ 1.28
CTSD-212ENST00000637815 HMMRO75330 724 aa23.01■■□□□ 1.27
CTSD-212ENST00000637815 SLKQ9H2G2 1235 aaPredicted RBP23.01■■□□□ 1.27
CTSD-212ENST00000637815 CDC45O75419 566 aa23.01■■□□□ 1.27
CTSD-212ENST00000637815 RGPD5Q99666 1765 aa23■■□□□ 1.27
CTSD-212ENST00000637815 FKBP5Q13451 457 aaPredicted RBP23■■□□□ 1.27
CTSD-212ENST00000637815 TTC22Q5TAA0 569 aa23■■□□□ 1.27
CTSD-212ENST00000637815 PROSER2Q86WR7 435 aaPredicted RBP22.99■■□□□ 1.27
CTSD-212ENST00000637815 GNAI2P04899 355 aa22.99■■□□□ 1.27
CTSD-212ENST00000637815 OVOS2A0A0G2JMS6 1433 aa22.98■■□□□ 1.27
CTSD-212ENST00000637815 XPCQ01831 940 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms