RNA–Protein interactions for RNA: ENST00000637789.1

CHD2-229, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-229ENST00000637789 C9orf131Q5VYM1 1079 aa14.7□□□□□ -0.06
CHD2-229ENST00000637789 CCNL1Q9UK58 526 aaPredicted RBP14.7□□□□□ -0.06
CHD2-229ENST00000637789 TNRC6CQ9HCJ0 1690 aaKnown RBP14.7□□□□□ -0.06
CHD2-229ENST00000637789 CTCFP49711 727 aaPredicted RBP14.69□□□□□ -0.06
CHD2-229ENST00000637789 NLRP6P59044 892 aa14.69□□□□□ -0.06
CHD2-229ENST00000637789 PKD1L3Q7Z443 1732 aa14.69□□□□□ -0.06
CHD2-229ENST00000637789 CCDC85CA6NKD9 419 aa14.68□□□□□ -0.06
CHD2-229ENST00000637789 BCS1LQ9Y276 419 aa14.68□□□□□ -0.06
CHD2-229ENST00000637789 CCDC61Q9Y6R9 512 aa14.68□□□□□ -0.06
CHD2-229ENST00000637789 CDK19Q9BWU1 502 aa14.67□□□□□ -0.06
CHD2-229ENST00000637789 MKRN1Q9UHC7 482 aaKnown RBP14.67□□□□□ -0.06
CHD2-229ENST00000637789 USP54Q70EL1 1684 aa14.66□□□□□ -0.06
CHD2-229ENST00000637789 QRICH2Q9H0J4 1663 aa14.66□□□□□ -0.06
CHD2-229ENST00000637789 LBX1P52954 281 aa14.66□□□□□ -0.06
CHD2-229ENST00000637789 ARHGEF25Q86VW2 580 aa14.66□□□□□ -0.06
CHD2-229ENST00000637789 IL2RBP14784 551 aa14.65□□□□□ -0.06
CHD2-229ENST00000637789 AIDAQ96BJ3 306 aa14.65□□□□□ -0.06
CHD2-229ENST00000637789 SYTL4Q96C24 671 aaPredicted RBP14.65□□□□□ -0.06
CHD2-229ENST00000637789 KIAA1551Q9HCM1 1747 aa14.65□□□□□ -0.06
CHD2-229ENST00000637789 TNRC18O15417 2968 aaPredicted RBP14.64□□□□□ -0.07
CHD2-229ENST00000637789 LOC105371045A0A1W2PR82 267 aa14.64□□□□□ -0.07
CHD2-229ENST00000637789 FLAD1Q8NFF5 587 aa14.64□□□□□ -0.07
CHD2-229ENST00000637789 NSD2O96028 1365 aa14.63□□□□□ -0.07
CHD2-229ENST00000637789 N4BP2Q86UW6 1770 aaPredicted RBP14.63□□□□□ -0.07
CHD2-229ENST00000637789 PRIM1P49642 420 aaKnown RBP14.63□□□□□ -0.07
CHD2-229ENST00000637789 C5P01031 1676 aa14.62□□□□□ -0.07
CHD2-229ENST00000637789 SMIM5Q71RC9 77 aa14.62□□□□□ -0.07
CHD2-229ENST00000637789 ERBB3P21860 1342 aa14.62□□□□□ -0.07
CHD2-229ENST00000637789 ANKRD36BQ8N2N9 1353 aa14.61□□□□□ -0.07
CHD2-229ENST00000637789 DOT1LQ8TEK3 1739 aa14.61□□□□□ -0.07
CHD2-229ENST00000637789 A0A0G2JLW4 131 aa14.6□□□□□ -0.07
CHD2-229ENST00000637789 SOX12O15370 315 aa14.6□□□□□ -0.07
CHD2-229ENST00000637789 FCHSD2O94868 740 aa14.6□□□□□ -0.07
CHD2-229ENST00000637789 DDX54Q8TDD1 881 aaKnown RBP14.6□□□□□ -0.07
CHD2-229ENST00000637789 NLRP2Q9NX02 1062 aa14.6□□□□□ -0.07
CHD2-229ENST00000637789 RNF181Q9P0P0 153 aa14.6□□□□□ -0.07
CHD2-229ENST00000637789 AMIGO3Q86WK7 504 aa14.59□□□□□ -0.07
CHD2-229ENST00000637789 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
CHD2-229ENST00000637789 KIF13BQ9NQT8 1826 aa14.59□□□□□ -0.07
CHD2-229ENST00000637789 TGFB2P61812 414 aa14.58□□□□□ -0.08
CHD2-229ENST00000637789 TOGARAM1Q9Y4F4 1720 aa14.58□□□□□ -0.08
CHD2-229ENST00000637789 HSPA8P11142 646 aaKnown RBP14.57□□□□□ -0.08
CHD2-229ENST00000637789 VEGFAP15692 232 aaPredicted RBP14.57□□□□□ -0.08
CHD2-229ENST00000637789 WBP1LQ9NX94 342 aa14.57□□□□□ -0.08
CHD2-229ENST00000637789 CNTNAP1P78357 1384 aa14.57□□□□□ -0.08
CHD2-229ENST00000637789 KCNH5Q8NCM2 988 aa14.56□□□□□ -0.08
CHD2-229ENST00000637789 USP47Q96K76 1375 aa14.56□□□□□ -0.08
CHD2-229ENST00000637789 PHF14O94880 888 aa14.55□□□□□ -0.08
CHD2-229ENST00000637789 CFAP44Q96MT7 982 aa14.55□□□□□ -0.08
CHD2-229ENST00000637789 TAF1LQ8IZX4 1826 aa14.55□□□□□ -0.08
CHD2-229ENST00000637789 DPEP1P16444 411 aa14.54□□□□□ -0.08
CHD2-229ENST00000637789 NFAT5O94916 1531 aa14.54□□□□□ -0.08
CHD2-229ENST00000637789 BRCA1P38398 1863 aaKnown RBP14.54□□□□□ -0.08
CHD2-229ENST00000637789 PDE4DIPQ5VU43 2346 aa14.53□□□□□ -0.08
CHD2-229ENST00000637789 ARFGEF1Q9Y6D6 1849 aa14.53□□□□□ -0.08
CHD2-229ENST00000637789 C4BP0C0L5 1744 aa14.52□□□□□ -0.08
CHD2-229ENST00000637789 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.52□□□□□ -0.09
CHD2-229ENST00000637789 VEGFBP49765 207 aa14.52□□□□□ -0.09
CHD2-229ENST00000637789 AK7Q96M32 723 aa14.52□□□□□ -0.09
CHD2-229ENST00000637789 UBR3Q6ZT12 1888 aa14.52□□□□□ -0.09
CHD2-229ENST00000637789 VIRMAQ69YN4 1812 aaKnown RBP14.51□□□□□ -0.09
CHD2-229ENST00000637789 MMP10P09238 476 aa14.51□□□□□ -0.09
CHD2-229ENST00000637789 SBF1O95248 1867 aa14.5□□□□□ -0.09
CHD2-229ENST00000637789 DCAF5Q96JK2 942 aa14.5□□□□□ -0.09
CHD2-229ENST00000637789 GLTPD2A6NH11 291 aa14.49□□□□□ -0.09
CHD2-229ENST00000637789 ZC3H4Q9UPT8 1303 aaKnown RBP14.48□□□□□ -0.09
CHD2-229ENST00000637789 KCNA3P22001 575 aa14.48□□□□□ -0.09
CHD2-229ENST00000637789 HMGB2P26583 209 aaKnown RBP14.48□□□□□ -0.09
CHD2-229ENST00000637789 SRPK2P78362 688 aaKnown RBP14.48□□□□□ -0.09
CHD2-229ENST00000637789 POTECB2RU33 542 aa14.47□□□□□ -0.09
CHD2-229ENST00000637789 SSFA2P28290 1259 aa14.47□□□□□ -0.09
CHD2-229ENST00000637789 ANKRD24Q8TF21 1146 aa14.47□□□□□ -0.09
CHD2-229ENST00000637789 CABP2Q9NPB3 220 aa14.47□□□□□ -0.09
CHD2-229ENST00000637789 CABP1Q9NZU7 370 aa14.47□□□□□ -0.09
CHD2-229ENST00000637789 NSD3Q9BZ95 1437 aa14.47□□□□□ -0.09
CHD2-229ENST00000637789 PRPF38BQ5VTL8 546 aaKnown RBP14.46□□□□□ -0.09
CHD2-229ENST00000637789 PALLDQ8WX93 1383 aa14.46□□□□□ -0.1
CHD2-229ENST00000637789 CHADLQ6NUI6 762 aa14.45□□□□□ -0.1
CHD2-229ENST00000637789 MPHOSPH9Q99550 1183 aa14.45□□□□□ -0.1
CHD2-229ENST00000637789 PIM2Q9P1W9 311 aa14.45□□□□□ -0.1
CHD2-229ENST00000637789 TTC21BQ7Z4L5 1316 aa14.44□□□□□ -0.1
CHD2-229ENST00000637789 DALRD3Q5D0E6 543 aaKnown RBP14.44□□□□□ -0.1
CHD2-229ENST00000637789 KDM6AO15550 1401 aaPredicted RBP14.43□□□□□ -0.1
CHD2-229ENST00000637789 RASSF7Q02833 373 aa14.43□□□□□ -0.1
CHD2-229ENST00000637789 CCDC87Q9NVE4 849 aa14.43□□□□□ -0.1
CHD2-229ENST00000637789 MAP2K1Q02750 393 aaPredicted RBP14.42□□□□□ -0.1
CHD2-229ENST00000637789 KDM2AQ9Y2K7 1162 aa14.42□□□□□ -0.1
CHD2-229ENST00000637789 POTEIP0CG38 1075 aa14.41□□□□□ -0.1
CHD2-229ENST00000637789 POTEJP0CG39 1038 aa14.41□□□□□ -0.1
CHD2-229ENST00000637789 MCOLN1Q9GZU1 580 aa14.41□□□□□ -0.1
CHD2-229ENST00000637789 PASKQ96RG2 1323 aa14.41□□□□□ -0.1
CHD2-229ENST00000637789 LTN1O94822 1766 aa14.4□□□□□ -0.1
CHD2-229ENST00000637789 ZCRB1Q8TBF4 217 aaKnown RBP14.4□□□□□ -0.1
CHD2-229ENST00000637789 C4AP0C0L4 1744 aa14.4□□□□□ -0.1
CHD2-229ENST00000637789 TIAM2Q8IVF5 1701 aa14.4□□□□□ -0.1
CHD2-229ENST00000637789 LMNB1P20700 586 aa14.39□□□□□ -0.11
CHD2-229ENST00000637789 TMEM88BA6NKF7 163 aa14.38□□□□□ -0.11
CHD2-229ENST00000637789 GNPATO15228 680 aa14.38□□□□□ -0.11
CHD2-229ENST00000637789 LINC00116Q8NCU8 138 aa14.38□□□□□ -0.11
CHD2-229ENST00000637789 TTC21AQ8NDW8 1320 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms