RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 HMOX1P09601 288 aa21.37■■□□□ 1.01
CLN6-216ENST00000636876 TATP17735 454 aaPredicted RBP21.37■■□□□ 1.01
CLN6-216ENST00000636876 OVOS2A0A0G2JMS6 1433 aa21.37■■□□□ 1.01
CLN6-216ENST00000636876 MIER1Q8N108 512 aa21.36■■□□□ 1.01
CLN6-216ENST00000636876 LRRC37A3O60309 1634 aa21.34■■□□□ 1.01
CLN6-216ENST00000636876 WDR43Q15061 677 aaKnown RBP eCLIP21.34■■□□□ 1.01
CLN6-216ENST00000636876 TNS2Q63HR2 1409 aa21.34■■□□□ 1.01
CLN6-216ENST00000636876 PLEKHG2Q9H7P9 1386 aa21.34■■□□□ 1.01
CLN6-216ENST00000636876 CCER2I3L3R5 266 aa21.33■■□□□ 1.01
CLN6-216ENST00000636876 DDB1Q16531 1140 aa21.33■■□□□ 1.01
CLN6-216ENST00000636876 RSPH6AQ9H0K4 717 aa21.33■■□□□ 1.01
CLN6-216ENST00000636876 EXOC5O00471 708 aa21.32■■□□□ 1
CLN6-216ENST00000636876 FCHSD2O94868 740 aa21.32■■□□□ 1
CLN6-216ENST00000636876 ZCRB1Q8TBF4 217 aaKnown RBP21.31■■□□□ 1
CLN6-216ENST00000636876 PKD1L3Q7Z443 1732 aa21.3■■□□□ 1
CLN6-216ENST00000636876 PRKAR2BP31323 418 aa21.3■■□□□ 1
CLN6-216ENST00000636876 PNISRQ8TF01 805 aaKnown RBP21.3■■□□□ 1
CLN6-216ENST00000636876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.3■■□□□ 1
CLN6-216ENST00000636876 ADAMTS8Q9UP79 889 aa21.29■■□□□ 1
CLN6-216ENST00000636876 SPG7Q9UQ90 795 aa21.29■■□□□ 1
CLN6-216ENST00000636876 PDE3BQ13370 1112 aa21.28■■□□□ 1
CLN6-216ENST00000636876 PLEKHO1Q53GL0 409 aaPredicted RBP21.28■■□□□ 1
CLN6-216ENST00000636876 KRT27Q7Z3Y8 459 aa21.28■■□□□ 1
CLN6-216ENST00000636876 SHANK3Q9BYB0 1731 aa21.27■■□□□ 1
CLN6-216ENST00000636876 AMOTQ4VCS5 1084 aa21.27■■□□□ 1
CLN6-216ENST00000636876 PNNQ9H307 717 aaKnown RBP21.26■□□□□ 0.99
CLN6-216ENST00000636876 PCDH11XQ9BZA7 1347 aa21.26■□□□□ 0.99
CLN6-216ENST00000636876 PCDH11YQ9BZA8 1340 aa21.26■□□□□ 0.99
CLN6-216ENST00000636876 MARCH10Q8NA82 808 aaPredicted RBP21.25■□□□□ 0.99
CLN6-216ENST00000636876 DDX54Q8TDD1 881 aaKnown RBP21.25■□□□□ 0.99
CLN6-216ENST00000636876 PLEKHF1Q96S99 279 aa21.25■□□□□ 0.99
CLN6-216ENST00000636876 CYP27B1O15528 508 aa21.24■□□□□ 0.99
CLN6-216ENST00000636876 ZNF530Q6P9A1 599 aaPredicted RBP21.24■□□□□ 0.99
CLN6-216ENST00000636876 PHACTR3Q96KR7 559 aa21.24■□□□□ 0.99
CLN6-216ENST00000636876 NEFMP07197 916 aa21.22■□□□□ 0.99
CLN6-216ENST00000636876 MTHFSDQ2M296 383 aaKnown RBP21.22■□□□□ 0.99
CLN6-216ENST00000636876 PHKG2P15735 406 aa21.21■□□□□ 0.99
CLN6-216ENST00000636876 FAM182BQ5T319 152 aa21.21■□□□□ 0.99
CLN6-216ENST00000636876 CCDC146Q8IYE0 955 aa21.21■□□□□ 0.99
CLN6-216ENST00000636876 IFNL2Q8IZJ0 200 aa21.21■□□□□ 0.99
CLN6-216ENST00000636876 GAS2L2Q8NHY3 880 aa21.21■□□□□ 0.99
CLN6-216ENST00000636876 MAPK8IP3Q9UPT6 1336 aa21.21■□□□□ 0.99
CLN6-216ENST00000636876 FAM9BQ8IZU0 186 aa21.2■□□□□ 0.98
CLN6-216ENST00000636876 RUNDC1Q96C34 613 aa21.2■□□□□ 0.98
CLN6-216ENST00000636876 C1orf141Q5JVX7 400 aa21.19■□□□□ 0.98
CLN6-216ENST00000636876 BCL9O00512 1426 aa21.19■□□□□ 0.98
CLN6-216ENST00000636876 SRCAPQ6ZRS2 3230 aa21.19■□□□□ 0.98
CLN6-216ENST00000636876 AKAP4Q5JQC9 854 aa21.18■□□□□ 0.98
CLN6-216ENST00000636876 NKX1-1Q15270 411 aaPredicted RBP21.17■□□□□ 0.98
CLN6-216ENST00000636876 FAM196AQ6ZSG2 479 aa21.17■□□□□ 0.98
CLN6-216ENST00000636876 NFE2L2Q16236 605 aa21.16■□□□□ 0.98
CLN6-216ENST00000636876 MAP3K5Q99683 1374 aa21.15■□□□□ 0.98
CLN6-216ENST00000636876 HSP90AB1P08238 724 aaKnown RBP21.15■□□□□ 0.98
CLN6-216ENST00000636876 GNAT3A8MTJ3 354 aa21.13■□□□□ 0.97
CLN6-216ENST00000636876 TMPOP42166 694 aaKnown RBP21.13■□□□□ 0.97
CLN6-216ENST00000636876 DCAF5Q96JK2 942 aa21.13■□□□□ 0.97
CLN6-216ENST00000636876 KDM6AO15550 1401 aaPredicted RBP21.12■□□□□ 0.97
CLN6-216ENST00000636876 MPRIPQ6WCQ1 1025 aa21.12■□□□□ 0.97
CLN6-216ENST00000636876 KAT6BQ8WYB5 2073 aa21.11■□□□□ 0.97
CLN6-216ENST00000636876 SBF2Q86WG5 1849 aa21.11■□□□□ 0.97
CLN6-216ENST00000636876 APAF1O14727 1248 aa21.11■□□□□ 0.97
CLN6-216ENST00000636876 CCDC125Q86Z20 511 aa21.11■□□□□ 0.97
CLN6-216ENST00000636876 DOT1LQ8TEK3 1739 aa21.11■□□□□ 0.97
CLN6-216ENST00000636876 TOGARAM1Q9Y4F4 1720 aa21.11■□□□□ 0.97
CLN6-216ENST00000636876 DLG5Q8TDM6 1919 aa21.11■□□□□ 0.97
CLN6-216ENST00000636876 ADAMTS7Q9UKP4 1686 aa21.1■□□□□ 0.97
CLN6-216ENST00000636876 ACSBG1Q96GR2 724 aa21.1■□□□□ 0.97
CLN6-216ENST00000636876 RRP7AQ9Y3A4 280 aaKnown RBP21.1■□□□□ 0.97
CLN6-216ENST00000636876 RNMTO43148 476 aaKnown RBP21.09■□□□□ 0.97
CLN6-216ENST00000636876 HTATSF1O43719 755 aaKnown RBP21.09■□□□□ 0.97
CLN6-216ENST00000636876 RIPK4P57078 832 aa21.09■□□□□ 0.97
CLN6-216ENST00000636876 SCN11AQ9UI33 1791 aa21.09■□□□□ 0.97
CLN6-216ENST00000636876 NHSQ6T4R5 1651 aa21.09■□□□□ 0.97
CLN6-216ENST00000636876 ERVV-2B6SEH9 535 aa21.08■□□□□ 0.97
CLN6-216ENST00000636876 PRIM1P49642 420 aaKnown RBP21.08■□□□□ 0.97
CLN6-216ENST00000636876 RTF1Q92541 710 aaKnown RBP21.08■□□□□ 0.97
CLN6-216ENST00000636876 LGR6Q9HBX8 967 aa21.08■□□□□ 0.97
CLN6-216ENST00000636876 VIRMAQ69YN4 1812 aaKnown RBP21.07■□□□□ 0.96
CLN6-216ENST00000636876 KCNQ2O43526 872 aa21.07■□□□□ 0.96
CLN6-216ENST00000636876 TRIM37O94972 964 aa21.07■□□□□ 0.96
CLN6-216ENST00000636876 NEUROD2Q15784 382 aa21.07■□□□□ 0.96
CLN6-216ENST00000636876 IL17REQ8NFR9 667 aa21.07■□□□□ 0.96
CLN6-216ENST00000636876 LMOD3Q0VAK6 560 aa21.06■□□□□ 0.96
CLN6-216ENST00000636876 DEFB132Q7Z7B7 95 aa21.06■□□□□ 0.96
CLN6-216ENST00000636876 BCL11BQ9C0K0 894 aaPredicted RBP21.06■□□□□ 0.96
CLN6-216ENST00000636876 CEMIPQ8WUJ3 1361 aa21.06■□□□□ 0.96
CLN6-216ENST00000636876 ITGB4P16144 1822 aa21.06■□□□□ 0.96
CLN6-216ENST00000636876 MCM10Q7L590 875 aa21.05■□□□□ 0.96
CLN6-216ENST00000636876 PTF1AQ7RTS3 328 aa21.05■□□□□ 0.96
CLN6-216ENST00000636876 SYTL4Q96C24 671 aaPredicted RBP21.05■□□□□ 0.96
CLN6-216ENST00000636876 MRC1P22897 1456 aa21.05■□□□□ 0.96
CLN6-216ENST00000636876 TNS1Q9HBL0 1735 aaKnown RBP21.04■□□□□ 0.96
CLN6-216ENST00000636876 DCTN1Q14203 1278 aa21.04■□□□□ 0.96
CLN6-216ENST00000636876 TRIM35Q9UPQ4 493 aa21.04■□□□□ 0.96
CLN6-216ENST00000636876 CABP4P57796 275 aa21.03■□□□□ 0.96
CLN6-216ENST00000636876 SLC52A2Q9HAB3 445 aa21.03■□□□□ 0.96
CLN6-216ENST00000636876 TMOD3Q9NYL9 352 aa21.03■□□□□ 0.96
CLN6-216ENST00000636876 SENP3-EIF4A1A0A087X0R7 540 aa21.02■□□□□ 0.96
CLN6-216ENST00000636876 TEFQ10587 303 aa21.02■□□□□ 0.96
CLN6-216ENST00000636876 NCBP3Q53F19 620 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms