RNA–Protein interactions for RNA: ENST00000628922.1

U3.53-201, humanhuman

BASIC

Gene U3, Length 216 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.53-201ENST00000628922 NLRP2Q9NX02 1062 aa6.25□□□□□ -1.41
U3.53-201ENST00000628922 RGPD1P0DJD0 1748 aa6.25□□□□□ -1.41
U3.53-201ENST00000628922 SPATA31A1Q5TZJ5 1347 aa6.25□□□□□ -1.41
U3.53-201ENST00000628922 THSD7AQ9UPZ6 1657 aa6.24□□□□□ -1.41
U3.53-201ENST00000628922 DIAPH1O60610 1272 aaKnown RBP6.24□□□□□ -1.41
U3.53-201ENST00000628922 EIF4A2Q14240 407 aaKnown RBP6.24□□□□□ -1.41
U3.53-201ENST00000628922 NUDCQ9Y266 331 aa6.24□□□□□ -1.41
U3.53-201ENST00000628922 THRAP3Q9Y2W1 955 aaKnown RBP6.24□□□□□ -1.41
U3.53-201ENST00000628922 COL3A1P02461 1466 aaPredicted RBP6.23□□□□□ -1.41
U3.53-201ENST00000628922 U2SURPO15042 1029 aaKnown RBP6.23□□□□□ -1.41
U3.53-201ENST00000628922 FAM98CQ17RN3 349 aaKnown RBP6.23□□□□□ -1.41
U3.53-201ENST00000628922 NBPF6Q5VWK0 638 aa6.23□□□□□ -1.41
U3.53-201ENST00000628922 DIEXFQ68CQ4 756 aaKnown RBP6.23□□□□□ -1.41
U3.53-201ENST00000628922 BARGINQ6ZT62 677 aa6.23□□□□□ -1.41
U3.53-201ENST00000628922 USHBP1Q8N6Y0 703 aa6.23□□□□□ -1.41
U3.53-201ENST00000628922 NBPF4Q96M43 638 aa6.23□□□□□ -1.41
U3.53-201ENST00000628922 LRRC37A3O60309 1634 aa6.23□□□□□ -1.41
U3.53-201ENST00000628922 PKD1L3Q7Z443 1732 aa6.22□□□□□ -1.41
U3.53-201ENST00000628922 IL2RBP14784 551 aa6.22□□□□□ -1.41
U3.53-201ENST00000628922 TATP17735 454 aaPredicted RBP6.22□□□□□ -1.41
U3.53-201ENST00000628922 IL13P35225 146 aa6.22□□□□□ -1.41
U3.53-201ENST00000628922 RAPGEF4Q8WZA2 1011 aa6.22□□□□□ -1.41
U3.53-201ENST00000628922 EYA1Q99502 592 aa6.22□□□□□ -1.41
U3.53-201ENST00000628922 CDCA7Q9BWT1 371 aaPredicted RBP6.22□□□□□ -1.41
U3.53-201ENST00000628922 RGS12O14924 1447 aa6.22□□□□□ -1.41
U3.53-201ENST00000628922 VIRMAQ69YN4 1812 aaKnown RBP6.22□□□□□ -1.41
U3.53-201ENST00000628922 IGSF1Q8N6C5 1336 aa6.22□□□□□ -1.41
U3.53-201ENST00000628922 SHANK3Q9BYB0 1731 aa6.22□□□□□ -1.41
U3.53-201ENST00000628922 C19orf67A6NJJ6 358 aa6.21□□□□□ -1.42
U3.53-201ENST00000628922 ONECUT3O60422 494 aaPredicted RBP6.21□□□□□ -1.42
U3.53-201ENST00000628922 DDB1Q16531 1140 aa6.21□□□□□ -1.42
U3.53-201ENST00000628922 SULT6B1Q6IMI4 303 aa6.21□□□□□ -1.42
U3.53-201ENST00000628922 SEPT12Q8IYM1 358 aa6.21□□□□□ -1.42
U3.53-201ENST00000628922 DISP2A7MBM2 1401 aa6.21□□□□□ -1.42
U3.53-201ENST00000628922 NCAPD2Q15021 1401 aa6.21□□□□□ -1.42
U3.53-201ENST00000628922 MEGF6O75095 1541 aa6.2□□□□□ -1.42
U3.53-201ENST00000628922 TNS2Q63HR2 1409 aa6.2□□□□□ -1.42
U3.53-201ENST00000628922 EXOC5O00471 708 aa6.2□□□□□ -1.42
U3.53-201ENST00000628922 NEFMP07197 916 aa6.2□□□□□ -1.42
U3.53-201ENST00000628922 HMOX1P09601 288 aa6.2□□□□□ -1.42
U3.53-201ENST00000628922 U2AF1L5P0DN76 240 aaPredicted RBP6.2□□□□□ -1.42
U3.53-201ENST00000628922 U2AF1Q01081 240 aaKnown RBP eCLIP6.2□□□□□ -1.42
U3.53-201ENST00000628922 PDE3BQ13370 1112 aa6.2□□□□□ -1.42
U3.53-201ENST00000628922 WDR43Q15061 677 aaKnown RBP eCLIP6.2□□□□□ -1.42
U3.53-201ENST00000628922 MRS2Q9HD23 443 aa6.2□□□□□ -1.42
U3.53-201ENST00000628922 KDRP35968 1356 aa6.19□□□□□ -1.42
U3.53-201ENST00000628922 DLG5Q8TDM6 1919 aa6.19□□□□□ -1.42
U3.53-201ENST00000628922 OVOS2A0A0G2JMS6 1433 aa6.19□□□□□ -1.42
U3.53-201ENST00000628922 GABBR2O75899 941 aa6.19□□□□□ -1.42
U3.53-201ENST00000628922 KRT27Q7Z3Y8 459 aa6.19□□□□□ -1.42
U3.53-201ENST00000628922 AEBP1Q8IUX7 1158 aa6.19□□□□□ -1.42
U3.53-201ENST00000628922 ZCRB1Q8TBF4 217 aaKnown RBP6.19□□□□□ -1.42
U3.53-201ENST00000628922 PNNQ9H307 717 aaKnown RBP6.19□□□□□ -1.42
U3.53-201ENST00000628922 SPG7Q9UQ90 795 aa6.19□□□□□ -1.42
U3.53-201ENST00000628922 SBF2Q86WG5 1849 aa6.19□□□□□ -1.42
U3.53-201ENST00000628922 DOT1LQ8TEK3 1739 aa6.19□□□□□ -1.42
U3.53-201ENST00000628922 PLEKHG2Q9H7P9 1386 aa6.18□□□□□ -1.42
U3.53-201ENST00000628922 AMOTQ4VCS5 1084 aa6.18□□□□□ -1.42
U3.53-201ENST00000628922 PLEKHO1Q53GL0 409 aaPredicted RBP6.18□□□□□ -1.42
U3.53-201ENST00000628922 DDX54Q8TDD1 881 aaKnown RBP6.18□□□□□ -1.42
U3.53-201ENST00000628922 RSPH6AQ9H0K4 717 aa6.18□□□□□ -1.42
U3.53-201ENST00000628922 PCDH11XQ9BZA7 1347 aa6.18□□□□□ -1.42
U3.53-201ENST00000628922 PCDH11YQ9BZA8 1340 aa6.18□□□□□ -1.42
U3.53-201ENST00000628922 SCN11AQ9UI33 1791 aa6.18□□□□□ -1.42
U3.53-201ENST00000628922 ITGB4P16144 1822 aa6.18□□□□□ -1.42
U3.53-201ENST00000628922 FCHSD2O94868 740 aa6.17□□□□□ -1.42
U3.53-201ENST00000628922 PRKAR2BP31323 418 aa6.17□□□□□ -1.42
U3.53-201ENST00000628922 CCDC184Q52MB2 194 aa6.17□□□□□ -1.42
U3.53-201ENST00000628922 ZNF530Q6P9A1 599 aaPredicted RBP6.17□□□□□ -1.42
U3.53-201ENST00000628922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.17□□□□□ -1.42
U3.53-201ENST00000628922 ATF5Q9Y2D1 282 aaPredicted RBP6.17□□□□□ -1.42
U3.53-201ENST00000628922 MAPK8IP3Q9UPT6 1336 aa6.17□□□□□ -1.42
U3.53-201ENST00000628922 NHSQ6T4R5 1651 aa6.17□□□□□ -1.42
U3.53-201ENST00000628922 CCER2I3L3R5 266 aa6.16□□□□□ -1.42
U3.53-201ENST00000628922 HSP90AB1P08238 724 aaKnown RBP6.16□□□□□ -1.42
U3.53-201ENST00000628922 PRKAR2AP13861 404 aaKnown RBP6.16□□□□□ -1.42
U3.53-201ENST00000628922 C1orf141Q5JVX7 400 aa6.16□□□□□ -1.42
U3.53-201ENST00000628922 FAM182BQ5T319 152 aa6.16□□□□□ -1.42
U3.53-201ENST00000628922 FAM196AQ6ZSG2 479 aa6.16□□□□□ -1.42
U3.53-201ENST00000628922 ILDR2Q71H61 639 aa6.16□□□□□ -1.42
U3.53-201ENST00000628922 IFNL2Q8IZJ0 200 aa6.16□□□□□ -1.42
U3.53-201ENST00000628922 MIER1Q8N108 512 aa6.16□□□□□ -1.42
U3.53-201ENST00000628922 MARCH10Q8NA82 808 aaPredicted RBP6.16□□□□□ -1.42
U3.53-201ENST00000628922 GAS2L2Q8NHY3 880 aa6.16□□□□□ -1.42
U3.53-201ENST00000628922 ADAMTS8Q9UP79 889 aa6.16□□□□□ -1.42
U3.53-201ENST00000628922 TNS1Q9HBL0 1735 aaKnown RBP6.16□□□□□ -1.42
U3.53-201ENST00000628922 TOGARAM1Q9Y4F4 1720 aa6.16□□□□□ -1.42
U3.53-201ENST00000628922 KAT6BQ8WYB5 2073 aa6.16□□□□□ -1.42
U3.53-201ENST00000628922 BTAF1O14981 1849 aa6.15□□□□□ -1.42
U3.53-201ENST00000628922 PHKG2P15735 406 aa6.15□□□□□ -1.42
U3.53-201ENST00000628922 MTHFSDQ2M296 383 aaKnown RBP6.15□□□□□ -1.42
U3.53-201ENST00000628922 AKAP4Q5JQC9 854 aa6.15□□□□□ -1.42
U3.53-201ENST00000628922 CCDC146Q8IYE0 955 aa6.15□□□□□ -1.42
U3.53-201ENST00000628922 FAM9BQ8IZU0 186 aa6.15□□□□□ -1.42
U3.53-201ENST00000628922 PNISRQ8TF01 805 aaKnown RBP6.15□□□□□ -1.42
U3.53-201ENST00000628922 RUNDC1Q96C34 613 aa6.15□□□□□ -1.42
U3.53-201ENST00000628922 PLSCR2Q9NRY7 297 aa6.15□□□□□ -1.42
U3.53-201ENST00000628922 GNAT3A8MTJ3 354 aa6.14□□□□□ -1.43
U3.53-201ENST00000628922 CYP27B1O15528 508 aa6.14□□□□□ -1.43
U3.53-201ENST00000628922 SF3B2Q13435 895 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms