RNA–Protein interactions for RNA: ENST00000628569.1

RAB5B-211, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB5B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-211ENST00000628569 ANKRD24Q8TF21 1146 aa16.73■□□□□ 0.27
RAB5B-211ENST00000628569 LTV1Q96GA3 475 aaPredicted RBP16.73■□□□□ 0.27
RAB5B-211ENST00000628569 THUMPD2Q9BTF0 503 aaKnown RBP16.73■□□□□ 0.27
RAB5B-211ENST00000628569 ADAMTS7Q9UKP4 1686 aa16.72■□□□□ 0.27
RAB5B-211ENST00000628569 COL22A1Q8NFW1 1626 aaPredicted RBP16.72■□□□□ 0.27
RAB5B-211ENST00000628569 FAM83GA6ND36 823 aa16.72■□□□□ 0.27
RAB5B-211ENST00000628569 C20orf194Q5TEA3 1177 aa16.72■□□□□ 0.27
RAB5B-211ENST00000628569 CRBNQ96SW2 442 aa16.72■□□□□ 0.27
RAB5B-211ENST00000628569 MBIPQ9NS73 344 aa16.72■□□□□ 0.27
RAB5B-211ENST00000628569 AXIN2Q9Y2T1 843 aa16.72■□□□□ 0.27
RAB5B-211ENST00000628569 MAP3K5Q99683 1374 aa16.72■□□□□ 0.27
RAB5B-211ENST00000628569 CHL1O00533 1208 aa16.71■□□□□ 0.27
RAB5B-211ENST00000628569 POTEAQ6S8J7 498 aa16.71■□□□□ 0.27
RAB5B-211ENST00000628569 KIAA0232Q92628 1395 aa16.71■□□□□ 0.27
RAB5B-211ENST00000628569 OVOS2A0A0G2JMS6 1433 aa16.7■□□□□ 0.26
RAB5B-211ENST00000628569 DCTN1Q14203 1278 aa16.7■□□□□ 0.26
RAB5B-211ENST00000628569 B4GALNT3Q6L9W6 998 aa16.7■□□□□ 0.26
RAB5B-211ENST00000628569 GNAT3A8MTJ3 354 aa16.69■□□□□ 0.26
RAB5B-211ENST00000628569 ZC3H6P61129 1189 aaKnown RBP16.69■□□□□ 0.26
RAB5B-211ENST00000628569 RTF1Q92541 710 aaKnown RBP16.69■□□□□ 0.26
RAB5B-211ENST00000628569 LRRC59Q96AG4 307 aaKnown RBP16.69■□□□□ 0.26
RAB5B-211ENST00000628569 BABAM1Q9NWV8 329 aa16.69■□□□□ 0.26
RAB5B-211ENST00000628569 VIRMAQ69YN4 1812 aaKnown RBP16.68■□□□□ 0.26
RAB5B-211ENST00000628569 PKD1L3Q7Z443 1732 aa16.68■□□□□ 0.26
RAB5B-211ENST00000628569 CEMIPQ8WUJ3 1361 aa16.68■□□□□ 0.26
RAB5B-211ENST00000628569 ZBTB7CA1YPR0 619 aa16.68■□□□□ 0.26
RAB5B-211ENST00000628569 VAMP4O75379 141 aa16.68■□□□□ 0.26
RAB5B-211ENST00000628569 AMOTQ4VCS5 1084 aa16.68■□□□□ 0.26
RAB5B-211ENST00000628569 MCM10Q7L590 875 aa16.68■□□□□ 0.26
RAB5B-211ENST00000628569 USHBP1Q8N6Y0 703 aa16.68■□□□□ 0.26
RAB5B-211ENST00000628569 SSH1Q8WYL5 1049 aa16.68■□□□□ 0.26
RAB5B-211ENST00000628569 CCDC136Q96JN2 1154 aa16.68■□□□□ 0.26
RAB5B-211ENST00000628569 MS4A1P11836 297 aa16.67■□□□□ 0.26
RAB5B-211ENST00000628569 AAMPQ13685 434 aa16.67■□□□□ 0.26
RAB5B-211ENST00000628569 CABLES1Q8TDN4 633 aa16.67■□□□□ 0.26
RAB5B-211ENST00000628569 KIF16BQ96L93 1317 aa16.67■□□□□ 0.26
RAB5B-211ENST00000628569 KDM3BQ7LBC6 1761 aa16.66■□□□□ 0.26
RAB5B-211ENST00000628569 HAP1P54257 671 aaPredicted RBP16.66■□□□□ 0.26
RAB5B-211ENST00000628569 LAS1LQ9Y4W2 734 aaKnown RBP16.66■□□□□ 0.26
RAB5B-211ENST00000628569 SIPA1L3O60292 1781 aaPredicted RBP16.65■□□□□ 0.26
RAB5B-211ENST00000628569 PLEKHO1Q53GL0 409 aaPredicted RBP16.65■□□□□ 0.26
RAB5B-211ENST00000628569 ZKSCAN2Q63HK3 967 aa16.65■□□□□ 0.26
RAB5B-211ENST00000628569 SMC4Q9NTJ3 1288 aa16.65■□□□□ 0.26
RAB5B-211ENST00000628569 TWISTNBQ3B726 338 aaPredicted RBP16.64■□□□□ 0.25
RAB5B-211ENST00000628569 AKAP4Q5JQC9 854 aa16.64■□□□□ 0.25
RAB5B-211ENST00000628569 IL17REQ8NFR9 667 aa16.64■□□□□ 0.25
RAB5B-211ENST00000628569 PARP4Q9UKK3 1724 aaKnown RBP16.64■□□□□ 0.25
RAB5B-211ENST00000628569 SOS1Q07889 1333 aaPredicted RBP16.64■□□□□ 0.25
RAB5B-211ENST00000628569 COL16A1Q07092 1604 aaPredicted RBP16.63■□□□□ 0.25
RAB5B-211ENST00000628569 COL5A2P05997 1499 aaPredicted RBP16.63■□□□□ 0.25
RAB5B-211ENST00000628569 CANXP27824 592 aaKnown RBP16.63■□□□□ 0.25
RAB5B-211ENST00000628569 C8orf58Q8NAV2 365 aa16.63■□□□□ 0.25
RAB5B-211ENST00000628569 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.63■□□□□ 0.25
RAB5B-211ENST00000628569 MRPL50Q8N5N7 158 aaKnown RBP16.62■□□□□ 0.25
RAB5B-211ENST00000628569 TSPYL6Q8N831 410 aa16.62■□□□□ 0.25
RAB5B-211ENST00000628569 ARHGAP45Q92619 1136 aa16.62■□□□□ 0.25
RAB5B-211ENST00000628569 FRAT1Q92837 279 aaPredicted RBP16.62■□□□□ 0.25
RAB5B-211ENST00000628569 BCL2L13Q9BXK5 485 aa16.62■□□□□ 0.25
RAB5B-211ENST00000628569 COL14A1Q05707 1796 aaKnown RBP16.61■□□□□ 0.25
RAB5B-211ENST00000628569 SCN11AQ9UI33 1791 aa16.61■□□□□ 0.25
RAB5B-211ENST00000628569 IPO8O15397 1037 aaKnown RBP16.61■□□□□ 0.25
RAB5B-211ENST00000628569 ATF7IPQ6VMQ6 1270 aa16.61■□□□□ 0.25
RAB5B-211ENST00000628569 SRCAPQ6ZRS2 3230 aa16.61■□□□□ 0.25
RAB5B-211ENST00000628569 MEGF6O75095 1541 aa16.6■□□□□ 0.25
RAB5B-211ENST00000628569 PHLPP1O60346 1717 aa16.6■□□□□ 0.25
RAB5B-211ENST00000628569 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
RAB5B-211ENST00000628569 PANK1Q8TE04 598 aa16.6■□□□□ 0.25
RAB5B-211ENST00000628569 WDR17Q8IZU2 1322 aa16.6■□□□□ 0.25
RAB5B-211ENST00000628569 RLBP1P12271 317 aa16.59■□□□□ 0.25
RAB5B-211ENST00000628569 TRIM27P14373 513 aa16.59■□□□□ 0.25
RAB5B-211ENST00000628569 TAF7Q15545 349 aaPredicted RBP16.59■□□□□ 0.25
RAB5B-211ENST00000628569 CHRNA2Q15822 529 aa16.59■□□□□ 0.25
RAB5B-211ENST00000628569 ZNF530Q6P9A1 599 aaPredicted RBP16.59■□□□□ 0.25
RAB5B-211ENST00000628569 DZIP1LQ8IYY4 767 aaKnown RBP16.59■□□□□ 0.25
RAB5B-211ENST00000628569 PRDM11Q9NQV5 511 aa16.59■□□□□ 0.25
RAB5B-211ENST00000628569 TSPYL4Q9UJ04 414 aa16.59■□□□□ 0.25
RAB5B-211ENST00000628569 NLRP2Q9NX02 1062 aa16.58■□□□□ 0.24
RAB5B-211ENST00000628569 NOB1Q9ULX3 412 aaKnown RBP16.58■□□□□ 0.24
RAB5B-211ENST00000628569 KDM2BQ8NHM5 1336 aa16.58■□□□□ 0.24
RAB5B-211ENST00000628569 CACNA1FO60840 1977 aa16.58■□□□□ 0.24
RAB5B-211ENST00000628569 MRC1P22897 1456 aa16.57■□□□□ 0.24
RAB5B-211ENST00000628569 TATP17735 454 aaPredicted RBP16.57■□□□□ 0.24
RAB5B-211ENST00000628569 MVPQ14764 893 aaKnown RBP16.57■□□□□ 0.24
RAB5B-211ENST00000628569 RAPGEF4Q8WZA2 1011 aa16.57■□□□□ 0.24
RAB5B-211ENST00000628569 CLUAP1Q96AJ1 413 aa16.57■□□□□ 0.24
RAB5B-211ENST00000628569 TNNQ9UQP3 1299 aa16.57■□□□□ 0.24
RAB5B-211ENST00000628569 COG6Q9Y2V7 657 aa16.57■□□□□ 0.24
RAB5B-211ENST00000628569 C1orf141Q5JVX7 400 aa16.56■□□□□ 0.24
RAB5B-211ENST00000628569 RNMTO43148 476 aaKnown RBP16.55■□□□□ 0.24
RAB5B-211ENST00000628569 CSB-PGBD3P0DP91 1061 aa16.55■□□□□ 0.24
RAB5B-211ENST00000628569 FTSJ3Q8IY81 847 aaKnown RBP16.55■□□□□ 0.24
RAB5B-211ENST00000628569 SPG7Q9UQ90 795 aa16.55■□□□□ 0.24
RAB5B-211ENST00000628569 SHANK3Q9BYB0 1731 aa16.55■□□□□ 0.24
RAB5B-211ENST00000628569 PLCH1Q4KWH8 1693 aa16.55■□□□□ 0.24
RAB5B-211ENST00000628569 ABCC4O15439 1325 aa16.54■□□□□ 0.24
RAB5B-211ENST00000628569 ELL2O00472 640 aaPredicted RBP16.54■□□□□ 0.24
RAB5B-211ENST00000628569 CENPQQ7L2Z9 268 aaPredicted RBP16.54■□□□□ 0.24
RAB5B-211ENST00000628569 UPF1Q92900 1129 aaKnown RBP eCLIP16.54■□□□□ 0.24
RAB5B-211ENST00000628569 LGR6Q9HBX8 967 aa16.54■□□□□ 0.24
RAB5B-211ENST00000628569 DDX19BQ9UMR2 479 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms