RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 PARD3Q8TEW0 1356 aa10.85□□□□□ -0.67
CHD2-213ENST00000628118 NCAPD2Q15021 1401 aa10.84□□□□□ -0.67
CHD2-213ENST00000628118 EXOC5O00471 708 aa10.84□□□□□ -0.67
CHD2-213ENST00000628118 SOCS7O14512 581 aa10.84□□□□□ -0.67
CHD2-213ENST00000628118 PDE3BQ13370 1112 aa10.84□□□□□ -0.67
CHD2-213ENST00000628118 DDB1Q16531 1140 aa10.84□□□□□ -0.67
CHD2-213ENST00000628118 NBPF6Q5VWK0 638 aa10.84□□□□□ -0.67
CHD2-213ENST00000628118 NBPF4Q96M43 638 aa10.84□□□□□ -0.67
CHD2-213ENST00000628118 CFAP53Q96M91 514 aa10.84□□□□□ -0.67
CHD2-213ENST00000628118 EIF4A2Q14240 407 aaKnown RBP10.83□□□□□ -0.68
CHD2-213ENST00000628118 CCDC125Q86Z20 511 aa10.83□□□□□ -0.68
CHD2-213ENST00000628118 RAPGEF4Q8WZA2 1011 aa10.83□□□□□ -0.68
CHD2-213ENST00000628118 BRWD3Q6RI45 1802 aa10.83□□□□□ -0.68
CHD2-213ENST00000628118 IGSF1Q8N6C5 1336 aa10.83□□□□□ -0.68
CHD2-213ENST00000628118 DIAPH1O60610 1272 aaKnown RBP10.82□□□□□ -0.68
CHD2-213ENST00000628118 TATP17735 454 aaPredicted RBP10.82□□□□□ -0.68
CHD2-213ENST00000628118 PPP2R1AP30153 589 aa10.82□□□□□ -0.68
CHD2-213ENST00000628118 IL13P35225 146 aa10.82□□□□□ -0.68
CHD2-213ENST00000628118 FAM196AQ6ZSG2 479 aa10.82□□□□□ -0.68
CHD2-213ENST00000628118 EYA1Q99502 592 aa10.82□□□□□ -0.68
CHD2-213ENST00000628118 BCL9O00512 1426 aa10.82□□□□□ -0.68
CHD2-213ENST00000628118 TNS2Q63HR2 1409 aa10.82□□□□□ -0.68
CHD2-213ENST00000628118 LRRC37A3O60309 1634 aa10.81□□□□□ -0.68
CHD2-213ENST00000628118 RGPD2P0DJD1 1756 aa10.81□□□□□ -0.68
CHD2-213ENST00000628118 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.81□□□□□ -0.685e-8■■■□□ 14.7
CHD2-213ENST00000628118 NUDCQ9Y266 331 aa10.81□□□□□ -0.68
CHD2-213ENST00000628118 OVOS2A0A0G2JMS6 1433 aa10.81□□□□□ -0.68
CHD2-213ENST00000628118 MYBBP1AQ9BQG0 1328 aaKnown RBP10.8□□□□□ -0.68
CHD2-213ENST00000628118 CNGB1Q14028 1251 aaPredicted RBP10.79□□□□□ -0.68
CHD2-213ENST00000628118 ZCRB1Q8TBF4 217 aaKnown RBP10.79□□□□□ -0.68
CHD2-213ENST00000628118 COL3A1P02461 1466 aaPredicted RBP10.79□□□□□ -0.68
CHD2-213ENST00000628118 KDRP35968 1356 aa10.78□□□□□ -0.68
CHD2-213ENST00000628118 AMOTQ4VCS5 1084 aa10.78□□□□□ -0.68
CHD2-213ENST00000628118 UPF1Q92900 1129 aaKnown RBP eCLIP10.78□□□□□ -0.68
CHD2-213ENST00000628118 PRKRIP1Q9H875 184 aaPredicted RBP10.78□□□□□ -0.68
CHD2-213ENST00000628118 SPG7Q9UQ90 795 aa10.78□□□□□ -0.68
CHD2-213ENST00000628118 PCDH11XQ9BZA7 1347 aa10.78□□□□□ -0.68
CHD2-213ENST00000628118 PCDH11YQ9BZA8 1340 aa10.78□□□□□ -0.68
CHD2-213ENST00000628118 MEGF6O75095 1541 aa10.78□□□□□ -0.68
CHD2-213ENST00000628118 RGPD1P0DJD0 1748 aa10.78□□□□□ -0.68
CHD2-213ENST00000628118 SF3B2Q13435 895 aaKnown RBP10.77□□□□□ -0.69
CHD2-213ENST00000628118 USHBP1Q8N6Y0 703 aa10.77□□□□□ -0.69
CHD2-213ENST00000628118 PLEKHO1Q53GL0 409 aaPredicted RBP10.76□□□□□ -0.69
CHD2-213ENST00000628118 SULT6B1Q6IMI4 303 aa10.76□□□□□ -0.69
CHD2-213ENST00000628118 MARCH10Q8NA82 808 aaPredicted RBP10.76□□□□□ -0.69
CHD2-213ENST00000628118 PKD1L3Q7Z443 1732 aa10.75□□□□□ -0.69
CHD2-213ENST00000628118 ANP32CO43423 234 aa10.75□□□□□ -0.69
CHD2-213ENST00000628118 PNNQ9H307 717 aaKnown RBP10.75□□□□□ -0.69
CHD2-213ENST00000628118 U2SURPO15042 1029 aaKnown RBP10.74□□□□□ -0.69
CHD2-213ENST00000628118 HSP90AB1P08238 724 aaKnown RBP10.74□□□□□ -0.69
CHD2-213ENST00000628118 IFNL2Q8IZJ0 200 aa10.74□□□□□ -0.69
CHD2-213ENST00000628118 FCHSD2O94868 740 aa10.73□□□□□ -0.69
CHD2-213ENST00000628118 NKX1-1Q15270 411 aaPredicted RBP10.73□□□□□ -0.69
CHD2-213ENST00000628118 DDX54Q8TDD1 881 aaKnown RBP10.73□□□□□ -0.69
CHD2-213ENST00000628118 BCL11BQ9C0K0 894 aaPredicted RBP10.73□□□□□ -0.69
CHD2-213ENST00000628118 SHANK3Q9BYB0 1731 aa10.72□□□□□ -0.69
CHD2-213ENST00000628118 SBF2Q86WG5 1849 aa10.72□□□□□ -0.69
CHD2-213ENST00000628118 NEFMP07197 916 aa10.72□□□□□ -0.69
CHD2-213ENST00000628118 U2AF1L5P0DN76 240 aaPredicted RBP10.72□□□□□ -0.69
CHD2-213ENST00000628118 BAG6P46379 1132 aa10.72□□□□□ -0.69
CHD2-213ENST00000628118 U2AF1Q01081 240 aaKnown RBP eCLIP10.72□□□□□ -0.69
CHD2-213ENST00000628118 AEBP1Q8IUX7 1158 aa10.72□□□□□ -0.69
CHD2-213ENST00000628118 KAT6BQ8WYB5 2073 aa10.72□□□□□ -0.69
CHD2-213ENST00000628118 CYP27B1O15528 508 aa10.71□□□□□ -0.69
CHD2-213ENST00000628118 TRIM37O94972 964 aa10.71□□□□□ -0.69
CHD2-213ENST00000628118 HMOX1P09601 288 aa10.71□□□□□ -0.69
CHD2-213ENST00000628118 PHKG2P15735 406 aa10.71□□□□□ -0.69
CHD2-213ENST00000628118 HMGB2P26583 209 aaKnown RBP10.71□□□□□ -0.69
CHD2-213ENST00000628118 C1orf141Q5JVX7 400 aa10.71□□□□□ -0.69
CHD2-213ENST00000628118 FAM182BQ5T319 152 aa10.71□□□□□ -0.69
CHD2-213ENST00000628118 GAS2L2Q8NHY3 880 aa10.71□□□□□ -0.69
CHD2-213ENST00000628118 NHSQ6T4R5 1651 aa10.7□□□□□ -0.7
CHD2-213ENST00000628118 PLSCR1O15162 318 aa10.7□□□□□ -0.7
CHD2-213ENST00000628118 AKAP4Q5JQC9 854 aa10.7□□□□□ -0.7
CHD2-213ENST00000628118 RBM42Q9BTD8 480 aaKnown RBP10.7□□□□□ -0.7
CHD2-213ENST00000628118 RSPH6AQ9H0K4 717 aa10.7□□□□□ -0.7
CHD2-213ENST00000628118 ZNF530Q6P9A1 599 aaPredicted RBP10.69□□□□□ -0.7
CHD2-213ENST00000628118 DCAF5Q96JK2 942 aa10.69□□□□□ -0.7
CHD2-213ENST00000628118 TNS1Q9HBL0 1735 aaKnown RBP10.69□□□□□ -0.7
CHD2-213ENST00000628118 RGPD3A6NKT7 1758 aaPredicted RBP10.68□□□□□ -0.7
CHD2-213ENST00000628118 RGPD4Q7Z3J3 1758 aa10.68□□□□□ -0.7
CHD2-213ENST00000628118 ERVV-2B6SEH9 535 aa10.68□□□□□ -0.7
CHD2-213ENST00000628118 APBA3O96018 575 aa10.68□□□□□ -0.7
CHD2-213ENST00000628118 PRKAR2BP31323 418 aa10.68□□□□□ -0.7
CHD2-213ENST00000628118 WDR43Q15061 677 aaKnown RBP eCLIP10.68□□□□□ -0.7
CHD2-213ENST00000628118 EP400Q96L91 3159 aa10.67□□□□□ -0.7
CHD2-213ENST00000628118 MTHFSDQ2M296 383 aaKnown RBP10.67□□□□□ -0.7
CHD2-213ENST00000628118 SPDYE2BA6NHP3 402 aa10.66□□□□□ -0.7
CHD2-213ENST00000628118 HTATSF1O43719 755 aaKnown RBP10.66□□□□□ -0.7
CHD2-213ENST00000628118 SPDYE6P0CI01 402 aa10.66□□□□□ -0.7
CHD2-213ENST00000628118 PRIM1P49642 420 aaKnown RBP10.66□□□□□ -0.7
CHD2-213ENST00000628118 SPDYE2Q495Y8 402 aa10.66□□□□□ -0.7
CHD2-213ENST00000628118 SMARCC1Q92922 1105 aaPredicted RBP10.66□□□□□ -0.7
CHD2-213ENST00000628118 ACSBG1Q96GR2 724 aa10.66□□□□□ -0.7
CHD2-213ENST00000628118 DOT1LQ8TEK3 1739 aa10.66□□□□□ -0.7
CHD2-213ENST00000628118 MAPK8IP3Q9UPT6 1336 aa10.65□□□□□ -0.7
CHD2-213ENST00000628118 GNAT3A8MTJ3 354 aa10.65□□□□□ -0.7
CHD2-213ENST00000628118 KCNQ2O43526 872 aa10.65□□□□□ -0.7
CHD2-213ENST00000628118 SYTL4Q96C24 671 aaPredicted RBP10.65□□□□□ -0.7
CHD2-213ENST00000628118 CAMKK2Q96RR4 588 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms