RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 TOM1O60784 492 aa9.09□□□□□ -0.95
CTNNA1-244ENST00000627109 CALD1Q05682 793 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-244ENST00000627109 NUDT16Q96DE0 195 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-244ENST00000627109 C19orf44Q9H6X5 657 aa9.09□□□□□ -0.95
CTNNA1-244ENST00000627109 VAMP4O75379 141 aa9.09□□□□□ -0.95
CTNNA1-244ENST00000627109 MRPL50Q8N5N7 158 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-244ENST00000627109 NOB1Q9ULX3 412 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-244ENST00000627109 UBE2Q2Q8WVN8 375 aa9.09□□□□□ -0.95
CTNNA1-244ENST00000627109 SMC4Q9NTJ3 1288 aa9.09□□□□□ -0.95
CTNNA1-244ENST00000627109 ANKARQ7Z5J8 1434 aa9.08□□□□□ -0.96
CTNNA1-244ENST00000627109 IGSF3O75054 1194 aa9.08□□□□□ -0.96
CTNNA1-244ENST00000627109 PRKAR2BP31323 418 aa9.08□□□□□ -0.96
CTNNA1-244ENST00000627109 CERKQ8TCT0 537 aa9.08□□□□□ -0.96
CTNNA1-244ENST00000627109 DDX17Q92841 729 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-244ENST00000627109 PHACTR3Q96KR7 559 aa9.08□□□□□ -0.96
CTNNA1-244ENST00000627109 KDRP35968 1356 aa9.08□□□□□ -0.96
CTNNA1-244ENST00000627109 KIAA0232Q92628 1395 aa9.08□□□□□ -0.96
CTNNA1-244ENST00000627109 PSME1Q06323 249 aa9.08□□□□□ -0.96
CTNNA1-244ENST00000627109 NUTM2GQ5VZR2 741 aa9.08□□□□□ -0.96
CTNNA1-244ENST00000627109 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-244ENST00000627109 IPO8O15397 1037 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-244ENST00000627109 NUCB1Q02818 461 aa9.08□□□□□ -0.96
CTNNA1-244ENST00000627109 NFKBIBQ15653 356 aa9.08□□□□□ -0.96
CTNNA1-244ENST00000627109 ARHGEF10O15013 1369 aa9.07□□□□□ -0.96
CTNNA1-244ENST00000627109 CAMTA1Q9Y6Y1 1673 aa9.07□□□□□ -0.96
CTNNA1-244ENST00000627109 CADPS2Q86UW7 1296 aa9.07□□□□□ -0.96
CTNNA1-244ENST00000627109 TMEM57Q8N5G2 664 aa9.07□□□□□ -0.96
CTNNA1-244ENST00000627109 MED1Q15648 1581 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-244ENST00000627109 ZBTB7BO15156 539 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-244ENST00000627109 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.07□□□□□ -0.966e-7■■■□□ 16.3
CTNNA1-244ENST00000627109 ORAI2Q96SN7 254 aa9.07□□□□□ -0.96
CTNNA1-244ENST00000627109 CRB1P82279 1406 aa9.07□□□□□ -0.96
CTNNA1-244ENST00000627109 MSH6P52701 1360 aa9.07□□□□□ -0.96
CTNNA1-244ENST00000627109 GNAI1P63096 354 aa9.07□□□□□ -0.96
CTNNA1-244ENST00000627109 NME9Q86XW9 330 aa9.07□□□□□ -0.96
CTNNA1-244ENST00000627109 SLAIN2Q9P270 581 aa9.06□□□□□ -0.96
CTNNA1-244ENST00000627109 EMILIN1Q9Y6C2 1016 aa9.06□□□□□ -0.96
CTNNA1-244ENST00000627109 LMOD3Q0VAK6 560 aa9.06□□□□□ -0.96
CTNNA1-244ENST00000627109 FTSJ3Q8IY81 847 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-244ENST00000627109 CCDC9Q9Y3X0 531 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-244ENST00000627109 LTN1O94822 1766 aa9.05□□□□□ -0.96
CTNNA1-244ENST00000627109 ATP10DQ9P241 1426 aa9.05□□□□□ -0.96
CTNNA1-244ENST00000627109 TTC21BQ7Z4L5 1316 aa9.05□□□□□ -0.96
CTNNA1-244ENST00000627109 KDM3BQ7LBC6 1761 aa9.05□□□□□ -0.96
CTNNA1-244ENST00000627109 MBIPQ9NS73 344 aa9.05□□□□□ -0.96
CTNNA1-244ENST00000627109 TTC21AQ8NDW8 1320 aa9.05□□□□□ -0.96
CTNNA1-244ENST00000627109 CHMP4BQ9H444 224 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-244ENST00000627109 UPF2Q9HAU5 1272 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-244ENST00000627109 RTL1A6NKG5 1358 aa9.04□□□□□ -0.96
CTNNA1-244ENST00000627109 NUTM2BA6NNL0 878 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-244ENST00000627109 NUTM2EB1AL46 878 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-244ENST00000627109 DDIT3P35638 169 aa9.04□□□□□ -0.96
CTNNA1-244ENST00000627109 RBM25P49756 843 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-244ENST00000627109 NUTM2AQ8IVF1 878 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-244ENST00000627109 LMO7Q8WWI1 1683 aa9.04□□□□□ -0.96
CTNNA1-244ENST00000627109 COG3Q96JB2 828 aa9.04□□□□□ -0.96
CTNNA1-244ENST00000627109 BCL11BQ9C0K0 894 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-244ENST00000627109 ADAMTS7Q9UKP4 1686 aa9.04□□□□□ -0.96
CTNNA1-244ENST00000627109 GCC1Q96CN9 775 aa9.03□□□□□ -0.96
CTNNA1-244ENST00000627109 ZRANB1Q9UGI0 708 aa9.03□□□□□ -0.96
CTNNA1-244ENST00000627109 SBNO1A3KN83 1393 aa9.03□□□□□ -0.96
CTNNA1-244ENST00000627109 CHL1O00533 1208 aa9.02□□□□□ -0.96
CTNNA1-244ENST00000627109 BMP2KLQ5H9B9 411 aa9.02□□□□□ -0.96
CTNNA1-244ENST00000627109 INTS3Q68E01 1043 aaKnown RBP9.02□□□□□ -0.96
CTNNA1-244ENST00000627109 SPRYD3Q8NCJ5 442 aa9.02□□□□□ -0.96
CTNNA1-244ENST00000627109 NFAT5O94916 1531 aa9.02□□□□□ -0.97
CTNNA1-244ENST00000627109 FBLN1P23142 703 aa9.02□□□□□ -0.97
CTNNA1-244ENST00000627109 EIF4A2Q14240 407 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-244ENST00000627109 ITPRIPQ8IWB1 547 aa9.02□□□□□ -0.97
CTNNA1-244ENST00000627109 SIRT2Q8IXJ6 389 aa9.02□□□□□ -0.97
CTNNA1-244ENST00000627109 TSPYL6Q8N831 410 aa9.02□□□□□ -0.97
CTNNA1-244ENST00000627109 SLKQ9H2G2 1235 aaPredicted RBP9.02□□□□□ -0.97
CTNNA1-244ENST00000627109 PHF8Q9UPP1 1060 aa9.02□□□□□ -0.97
CTNNA1-244ENST00000627109 SIPA1L3O60292 1781 aaPredicted RBP9.02□□□□□ -0.97
CTNNA1-244ENST00000627109 BECN1Q14457 450 aa9.02□□□□□ -0.97
CTNNA1-244ENST00000627109 ACEP12821 1306 aa9.02□□□□□ -0.97
CTNNA1-244ENST00000627109 PXDNLA1KZ92 1463 aa9.02□□□□□ -0.97
CTNNA1-244ENST00000627109 GSE1Q14687 1217 aa9.01□□□□□ -0.97
CTNNA1-244ENST00000627109 SNX21Q969T3 373 aa9.01□□□□□ -0.97
CTNNA1-244ENST00000627109 TBC1D2Q9BYX2 928 aa9.01□□□□□ -0.97
CTNNA1-244ENST00000627109 NCAPD2Q15021 1401 aa9.01□□□□□ -0.97
CTNNA1-244ENST00000627109 CRYBG1Q9Y4K1 1723 aa9.01□□□□□ -0.97
CTNNA1-244ENST00000627109 SAMD1Q6SPF0 538 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-244ENST00000627109 CHD1LQ86WJ1 897 aa9.01□□□□□ -0.97
CTNNA1-244ENST00000627109 IGSF1Q8N6C5 1336 aa9□□□□□ -0.97
CTNNA1-244ENST00000627109 BRD2P25440 801 aaKnown RBP9□□□□□ -0.97
CTNNA1-244ENST00000627109 C8orf58Q8NAV2 365 aa9□□□□□ -0.97
CTNNA1-244ENST00000627109 TRPM3Q9HCF6 1732 aaPredicted RBP9□□□□□ -0.97
CTNNA1-244ENST00000627109 FLT4P35916 1363 aa9□□□□□ -0.97
CTNNA1-244ENST00000627109 HMOX1P09601 288 aa9□□□□□ -0.97
CTNNA1-244ENST00000627109 TWISTNBQ3B726 338 aaPredicted RBP9□□□□□ -0.97
CTNNA1-244ENST00000627109 ABTB2Q8N961 1025 aa9□□□□□ -0.97
CTNNA1-244ENST00000627109 API5Q9BZZ5 524 aaKnown RBP9□□□□□ -0.97
CTNNA1-244ENST00000627109 PKNOX2Q96KN3 472 aa8.99□□□□□ -0.97
CTNNA1-244ENST00000627109 PTPRCP08575 1304 aa8.99□□□□□ -0.97
CTNNA1-244ENST00000627109 SOS1Q07889 1333 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-244ENST00000627109 KRT28Q7Z3Y7 464 aa8.99□□□□□ -0.97
CTNNA1-244ENST00000627109 MST1RQ04912 1400 aa8.99□□□□□ -0.97
CTNNA1-244ENST00000627109 ADAMTS2O95450 1211 aa8.99□□□□□ -0.97
CTNNA1-244ENST00000627109 NLRP6P59044 892 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms