RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 EZH2Q15910 746 aaKnown RBP22.7■■□□□ 1.22
UBE3D-208ENST00000626828 SBF2Q86WG5 1849 aa22.7■■□□□ 1.22
UBE3D-208ENST00000626828 PARD3Q8TEW0 1356 aa22.67■■□□□ 1.22
UBE3D-208ENST00000626828 PTF1AQ7RTS3 328 aa22.67■■□□□ 1.22
UBE3D-208ENST00000626828 ACSBG1Q96GR2 724 aa22.67■■□□□ 1.22
UBE3D-208ENST00000626828 MEGF6O75095 1541 aa22.67■■□□□ 1.22
UBE3D-208ENST00000626828 TNS1Q9HBL0 1735 aaKnown RBP22.66■■□□□ 1.22
UBE3D-208ENST00000626828 KCNQ2O43526 872 aa22.66■■□□□ 1.22
UBE3D-208ENST00000626828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.66■■□□□ 1.22
UBE3D-208ENST00000626828 SPG7Q9UQ90 795 aa22.66■■□□□ 1.22
UBE3D-208ENST00000626828 NCAPD2Q15021 1401 aa22.65■■□□□ 1.22
UBE3D-208ENST00000626828 IGSF1Q8N6C5 1336 aa22.64■■□□□ 1.22
UBE3D-208ENST00000626828 IL13P35225 146 aa22.64■■□□□ 1.21
UBE3D-208ENST00000626828 PCDH11XQ9BZA7 1347 aa22.62■■□□□ 1.21
UBE3D-208ENST00000626828 PCDH11YQ9BZA8 1340 aa22.62■■□□□ 1.21
UBE3D-208ENST00000626828 PRIM1P49642 420 aaKnown RBP22.61■■□□□ 1.21
UBE3D-208ENST00000626828 CYP27B1O15528 508 aa22.6■■□□□ 1.21
UBE3D-208ENST00000626828 DIAPH1O60610 1272 aaKnown RBP22.6■■□□□ 1.21
UBE3D-208ENST00000626828 NBPF14Q5TI25 921 aa22.6■■□□□ 1.21
UBE3D-208ENST00000626828 DDX10Q13206 875 aaKnown RBP22.58■■□□□ 1.21
UBE3D-208ENST00000626828 PLEKHO1Q53GL0 409 aaPredicted RBP22.58■■□□□ 1.21
UBE3D-208ENST00000626828 SULT6B1Q6IMI4 303 aa22.58■■□□□ 1.21
UBE3D-208ENST00000626828 SYTL4Q96C24 671 aaPredicted RBP22.58■■□□□ 1.21
UBE3D-208ENST00000626828 NKX1-1Q15270 411 aaPredicted RBP22.57■■□□□ 1.2
UBE3D-208ENST00000626828 AMOTQ4VCS5 1084 aa22.57■■□□□ 1.2
UBE3D-208ENST00000626828 IFNL2Q8IZJ0 200 aa22.57■■□□□ 1.2
UBE3D-208ENST00000626828 PROM2Q8N271 834 aa22.57■■□□□ 1.2
UBE3D-208ENST00000626828 PLEKHG2Q9H7P9 1386 aa22.57■■□□□ 1.2
UBE3D-208ENST00000626828 CFAP53Q96M91 514 aa22.56■■□□□ 1.2
UBE3D-208ENST00000626828 PPP2R1AP30153 589 aa22.55■■□□□ 1.2
UBE3D-208ENST00000626828 TXNRD1Q16881 649 aa22.55■■□□□ 1.2
UBE3D-208ENST00000626828 SHANK3Q9BYB0 1731 aa22.54■■□□□ 1.2
UBE3D-208ENST00000626828 AEBP1Q8IUX7 1158 aa22.54■■□□□ 1.2
UBE3D-208ENST00000626828 NHSQ6T4R5 1651 aa22.54■■□□□ 1.2
UBE3D-208ENST00000626828 PHKG2P15735 406 aa22.53■■□□□ 1.2
UBE3D-208ENST00000626828 KDRP35968 1356 aa22.51■■□□□ 1.19
UBE3D-208ENST00000626828 PSDA5PKW4 1024 aaPredicted RBP22.51■■□□□ 1.19
UBE3D-208ENST00000626828 R3HDM1Q15032 1099 aaKnown RBP22.51■■□□□ 1.19
UBE3D-208ENST00000626828 PKD1L3Q7Z443 1732 aa22.51■■□□□ 1.19
UBE3D-208ENST00000626828 RGPD3A6NKT7 1758 aaPredicted RBP22.5■■□□□ 1.19
UBE3D-208ENST00000626828 RGPD4Q7Z3J3 1758 aa22.5■■□□□ 1.19
UBE3D-208ENST00000626828 HSP90AB1P08238 724 aaKnown RBP22.5■■□□□ 1.19
UBE3D-208ENST00000626828 NUDCQ9Y266 331 aa22.5■■□□□ 1.19
UBE3D-208ENST00000626828 BTAF1O14981 1849 aa22.5■■□□□ 1.19
UBE3D-208ENST00000626828 U2SURPO15042 1029 aaKnown RBP22.49■■□□□ 1.19
UBE3D-208ENST00000626828 HMOX1P09601 288 aa22.49■■□□□ 1.19
UBE3D-208ENST00000626828 ZNF530Q6P9A1 599 aaPredicted RBP22.49■■□□□ 1.19
UBE3D-208ENST00000626828 MPRIPQ6WCQ1 1025 aa22.49■■□□□ 1.19
UBE3D-208ENST00000626828 RREB1Q92766 1687 aa22.48■■□□□ 1.19
UBE3D-208ENST00000626828 RALBP1Q15311 655 aa22.47■■□□□ 1.19
UBE3D-208ENST00000626828 C1orf141Q5JVX7 400 aa22.47■■□□□ 1.19
UBE3D-208ENST00000626828 SLC27A3Q5K4L6 730 aa22.47■■□□□ 1.19
UBE3D-208ENST00000626828 DCAF5Q96JK2 942 aa22.46■■□□□ 1.19
UBE3D-208ENST00000626828 ERVV-2B6SEH9 535 aa22.45■■□□□ 1.18
UBE3D-208ENST00000626828 PIGBQ92521 554 aa22.45■■□□□ 1.18
UBE3D-208ENST00000626828 STK32BQ9NY57 414 aa22.45■■□□□ 1.18
UBE3D-208ENST00000626828 DOT1LQ8TEK3 1739 aa22.45■■□□□ 1.18
UBE3D-208ENST00000626828 HMGB2P26583 209 aaKnown RBP22.44■■□□□ 1.18
UBE3D-208ENST00000626828 NUP188Q5SRE5 1749 aa22.44■■□□□ 1.18
UBE3D-208ENST00000626828 SMARCC1Q92922 1105 aaPredicted RBP22.44■■□□□ 1.18
UBE3D-208ENST00000626828 TMOD3Q9NYL9 352 aa22.44■■□□□ 1.18
UBE3D-208ENST00000626828 COL3A1P02461 1466 aaPredicted RBP22.43■■□□□ 1.18
UBE3D-208ENST00000626828 LRRC4BQ9NT99 713 aa22.43■■□□□ 1.18
UBE3D-208ENST00000626828 SLC15A2Q16348 729 aa22.42■■□□□ 1.18
UBE3D-208ENST00000626828 AKAP4Q5JQC9 854 aa22.41■■□□□ 1.18
UBE3D-208ENST00000626828 ITGB4P16144 1822 aa22.41■■□□□ 1.18
UBE3D-208ENST00000626828 ZNF316A6NFI3 1004 aaPredicted RBP22.4■■□□□ 1.18
UBE3D-208ENST00000626828 U2AF1L5P0DN76 240 aaPredicted RBP22.4■■□□□ 1.18
UBE3D-208ENST00000626828 U2AF1Q01081 240 aaKnown RBP eCLIP22.4■■□□□ 1.18
UBE3D-208ENST00000626828 ANO8Q9HCE9 1232 aaPredicted RBP22.4■■□□□ 1.18
UBE3D-208ENST00000626828 CCNL1Q9UK58 526 aaPredicted RBP22.4■■□□□ 1.18
UBE3D-208ENST00000626828 CABP4P57796 275 aa22.39■■□□□ 1.17
UBE3D-208ENST00000626828 MTHFSDQ2M296 383 aaKnown RBP22.39■■□□□ 1.17
UBE3D-208ENST00000626828 FCHSD2O94868 740 aa22.38■■□□□ 1.17
UBE3D-208ENST00000626828 KCNQ4P56696 695 aa22.36■■□□□ 1.17
UBE3D-208ENST00000626828 PALLDQ8WX93 1383 aa22.36■■□□□ 1.17
UBE3D-208ENST00000626828 GAS2L2Q8NHY3 880 aa22.35■■□□□ 1.17
UBE3D-208ENST00000626828 RSPH6AQ9H0K4 717 aa22.35■■□□□ 1.17
UBE3D-208ENST00000626828 ASAP1Q9ULH1 1129 aa22.35■■□□□ 1.17
UBE3D-208ENST00000626828 TOGARAM1Q9Y4F4 1720 aa22.34■■□□□ 1.17
UBE3D-208ENST00000626828 PRKAR2BP31323 418 aa22.34■■□□□ 1.17
UBE3D-208ENST00000626828 NFATC2IPQ8NCF5 419 aa22.34■■□□□ 1.17
UBE3D-208ENST00000626828 AKT1S1Q96B36 256 aa22.34■■□□□ 1.17
UBE3D-208ENST00000626828 ATG3Q9NT62 314 aa22.34■■□□□ 1.17
UBE3D-208ENST00000626828 LY75O60449 1722 aa22.34■■□□□ 1.17
UBE3D-208ENST00000626828 RNMTO43148 476 aaKnown RBP22.33■■□□□ 1.17
UBE3D-208ENST00000626828 LGR6Q9HBX8 967 aa22.33■■□□□ 1.17
UBE3D-208ENST00000626828 PHACTR3Q96KR7 559 aa22.32■■□□□ 1.16
UBE3D-208ENST00000626828 MYBBP1AQ9BQG0 1328 aaKnown RBP22.31■■□□□ 1.16
UBE3D-208ENST00000626828 KDM6AO15550 1401 aaPredicted RBP22.31■■□□□ 1.16
UBE3D-208ENST00000626828 LOC102724428A0A0B4J2F2 783 aa22.31■■□□□ 1.16
UBE3D-208ENST00000626828 SIK1P57059 783 aa22.31■■□□□ 1.16
UBE3D-208ENST00000626828 TFCP2L1Q9NZI6 479 aa22.31■■□□□ 1.16
UBE3D-208ENST00000626828 GNAT3A8MTJ3 354 aa22.3■■□□□ 1.16
UBE3D-208ENST00000626828 ZNF827Q17R98 1081 aa22.3■■□□□ 1.16
UBE3D-208ENST00000626828 PNNQ9H307 717 aaKnown RBP22.3■■□□□ 1.16
UBE3D-208ENST00000626828 PRKRIP1Q9H875 184 aaPredicted RBP22.3■■□□□ 1.16
UBE3D-208ENST00000626828 SPON1Q9HCB6 807 aa22.3■■□□□ 1.16
UBE3D-208ENST00000626828 NEFMP07197 916 aa22.29■■□□□ 1.16
UBE3D-208ENST00000626828 SLC52A2Q9HAB3 445 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms