RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 HSPA1LP34931 641 aa15.04■□□□□ -0
LINC00538-201ENST00000626109 RALBP1Q15311 655 aa15.04■□□□□ -0
LINC00538-201ENST00000626109 USP19O94966 1318 aa15.03■□□□□ -0
LINC00538-201ENST00000626109 PNPLA6Q8IY17 1366 aa15.03■□□□□ -0
LINC00538-201ENST00000626109 SMG6Q86US8 1419 aaKnown RBP15.03■□□□□ -0
LINC00538-201ENST00000626109 PARD3Q8TEW0 1356 aa15.03■□□□□ -0
LINC00538-201ENST00000626109 TRAK2O60296 914 aa15.03■□□□□ -0
LINC00538-201ENST00000626109 SLIT3O75094 1523 aa15.02■□□□□ -0
LINC00538-201ENST00000626109 JCADQ9P266 1359 aa15.02■□□□□ -0
LINC00538-201ENST00000626109 LOC102724159A0A0B4J2E5 919 aa15.02■□□□□ -0
LINC00538-201ENST00000626109 PWP2Q15269 919 aaKnown RBP15.02■□□□□ -0
LINC00538-201ENST00000626109 PROM2Q8N271 834 aa15.02■□□□□ -0
LINC00538-201ENST00000626109 KCNH5Q8NCM2 988 aa15.02■□□□□ -0
LINC00538-201ENST00000626109 MARF1Q9Y4F3 1742 aaKnown RBP15.02□□□□□ -0.01
LINC00538-201ENST00000626109 COL22A1Q8NFW1 1626 aaPredicted RBP15.01□□□□□ -0.01
LINC00538-201ENST00000626109 SOX12O15370 315 aa15.01□□□□□ -0.01
LINC00538-201ENST00000626109 TNNT2P45379 298 aaPredicted RBP15.01□□□□□ -0.01
LINC00538-201ENST00000626109 BARGINQ6ZT62 677 aa15.01□□□□□ -0.01
LINC00538-201ENST00000626109 SHPRHQ149N8 1683 aa15□□□□□ -0.01
LINC00538-201ENST00000626109 PHRF1Q9P1Y6 1649 aaKnown RBP15□□□□□ -0.01
LINC00538-201ENST00000626109 NUDCQ9Y266 331 aa15□□□□□ -0.01
LINC00538-201ENST00000626109 FANCIQ9NVI1 1328 aa15□□□□□ -0.01
LINC00538-201ENST00000626109 GCP02774 474 aa15□□□□□ -0.01
LINC00538-201ENST00000626109 HS6ST3Q8IZP7 471 aa15□□□□□ -0.01
LINC00538-201ENST00000626109 CABLES1Q8TDN4 633 aa15□□□□□ -0.01
LINC00538-201ENST00000626109 AATKQ6ZMQ8 1374 aa14.99□□□□□ -0.01
LINC00538-201ENST00000626109 CRYBG1Q9Y4K1 1723 aa14.99□□□□□ -0.01
LINC00538-201ENST00000626109 NOL8Q76FK4 1167 aaKnown RBP14.99□□□□□ -0.01
LINC00538-201ENST00000626109 MAFGO15525 162 aa14.98□□□□□ -0.01
LINC00538-201ENST00000626109 PNISRQ8TF01 805 aaKnown RBP14.98□□□□□ -0.01
LINC00538-201ENST00000626109 ABCA3Q99758 1704 aa14.98□□□□□ -0.01
LINC00538-201ENST00000626109 NFAT5O94916 1531 aa14.98□□□□□ -0.01
LINC00538-201ENST00000626109 MYBBP1AQ9BQG0 1328 aaKnown RBP14.98□□□□□ -0.01
LINC00538-201ENST00000626109 GTPBP6O43824 516 aaPredicted RBP14.98□□□□□ -0.01
LINC00538-201ENST00000626109 BRD1O95696 1058 aa14.98□□□□□ -0.01
LINC00538-201ENST00000626109 EXOC8Q8IYI6 725 aa14.97□□□□□ -0.01
LINC00538-201ENST00000626109 PPP2R1AP30153 589 aa14.96□□□□□ -0.01
LINC00538-201ENST00000626109 SPATA31A6Q5VVP1 1343 aa14.96□□□□□ -0.01
LINC00538-201ENST00000626109 FBLN1P23142 703 aa14.95□□□□□ -0.02
LINC00538-201ENST00000626109 RRS1Q15050 365 aaKnown RBP14.95□□□□□ -0.02
LINC00538-201ENST00000626109 RIPOR2Q9Y4F9 1068 aa14.95□□□□□ -0.02
LINC00538-201ENST00000626109 UNCXA6NJT0 531 aa14.94□□□□□ -0.02
LINC00538-201ENST00000626109 NUTM2BA6NNL0 878 aaPredicted RBP14.94□□□□□ -0.02
LINC00538-201ENST00000626109 NUTM2EB1AL46 878 aaPredicted RBP14.94□□□□□ -0.02
LINC00538-201ENST00000626109 ZC3H6P61129 1189 aaKnown RBP14.94□□□□□ -0.02
LINC00538-201ENST00000626109 NUTM2AQ8IVF1 878 aaPredicted RBP14.94□□□□□ -0.02
LINC00538-201ENST00000626109 MAP3K19Q56UN5 1328 aa14.94□□□□□ -0.02
LINC00538-201ENST00000626109 CPDO75976 1380 aa14.94□□□□□ -0.02
LINC00538-201ENST00000626109 POLKQ9UBT6 870 aa14.94□□□□□ -0.02
LINC00538-201ENST00000626109 AMPHP49418 695 aa14.93□□□□□ -0.02
LINC00538-201ENST00000626109 ARHGEF25Q86VW2 580 aa14.93□□□□□ -0.02
LINC00538-201ENST00000626109 GPATCH11Q8N954 259 aa14.93□□□□□ -0.02
LINC00538-201ENST00000626109 EMILIN1Q9Y6C2 1016 aa14.93□□□□□ -0.02
LINC00538-201ENST00000626109 RNF123Q5XPI4 1314 aa14.93□□□□□ -0.02
LINC00538-201ENST00000626109 RTL1A6NKG5 1358 aa14.92□□□□□ -0.02
LINC00538-201ENST00000626109 KIF24Q5T7B8 1368 aa14.92□□□□□ -0.02
LINC00538-201ENST00000626109 KIAA0232Q92628 1395 aa14.92□□□□□ -0.02
LINC00538-201ENST00000626109 MTHFSP49914 203 aa14.92□□□□□ -0.02
LINC00538-201ENST00000626109 FAM43BQ6ZT52 329 aaPredicted RBP14.92□□□□□ -0.02
LINC00538-201ENST00000626109 PRDM11Q9NQV5 511 aa14.92□□□□□ -0.02
LINC00538-201ENST00000626109 LTN1O94822 1766 aa14.92□□□□□ -0.02
LINC00538-201ENST00000626109 B4GALNT3Q6L9W6 998 aa14.92□□□□□ -0.02
LINC00538-201ENST00000626109 CDK12Q9NYV4 1490 aaPredicted RBP14.91□□□□□ -0.02
LINC00538-201ENST00000626109 MAP2P11137 1827 aaKnown RBP14.91□□□□□ -0.02
LINC00538-201ENST00000626109 FLT4P35916 1363 aa14.91□□□□□ -0.02
LINC00538-201ENST00000626109 WWC1Q8IX03 1113 aa14.91□□□□□ -0.02
LINC00538-201ENST00000626109 ANKRD13AQ8IZ07 590 aa14.91□□□□□ -0.02
LINC00538-201ENST00000626109 CFAP53Q96M91 514 aa14.91□□□□□ -0.02
LINC00538-201ENST00000626109 KDM4CQ9H3R0 1056 aa14.91□□□□□ -0.02
LINC00538-201ENST00000626109 ADAMTS2O95450 1211 aa14.9□□□□□ -0.02
LINC00538-201ENST00000626109 SPATA32Q96LK8 384 aa14.9□□□□□ -0.02
LINC00538-201ENST00000626109 ABCC6O95255 1503 aa14.9□□□□□ -0.02
LINC00538-201ENST00000626109 HSP90AB4PQ58FF6 505 aa14.9□□□□□ -0.02
LINC00538-201ENST00000626109 PEAK1Q9H792 1746 aa14.89□□□□□ -0.03
LINC00538-201ENST00000626109 ZMYND10O75800 440 aa14.89□□□□□ -0.03
LINC00538-201ENST00000626109 HOXC9P31274 260 aa14.89□□□□□ -0.03
LINC00538-201ENST00000626109 CHRNA2Q15822 529 aa14.89□□□□□ -0.03
LINC00538-201ENST00000626109 IP6K1Q92551 441 aa14.89□□□□□ -0.03
LINC00538-201ENST00000626109 LRP6O75581 1613 aa14.88□□□□□ -0.03
LINC00538-201ENST00000626109 PDE3BQ13370 1112 aa14.88□□□□□ -0.03
LINC00538-201ENST00000626109 GRIPAP1Q4V328 841 aa14.88□□□□□ -0.03
LINC00538-201ENST00000626109 DNAJC2Q99543 621 aaKnown RBP14.88□□□□□ -0.03
LINC00538-201ENST00000626109 BLMP54132 1417 aaPredicted RBP14.88□□□□□ -0.03
LINC00538-201ENST00000626109 COL14A1Q05707 1796 aaKnown RBP14.87□□□□□ -0.03
LINC00538-201ENST00000626109 MEX3CQ5U5Q3 659 aaKnown RBP14.87□□□□□ -0.03
LINC00538-201ENST00000626109 INSRP06213 1382 aa14.87□□□□□ -0.03
LINC00538-201ENST00000626109 FAM83GA6ND36 823 aa14.86□□□□□ -0.03
LINC00538-201ENST00000626109 HSP90AB2PQ58FF8 381 aa14.86□□□□□ -0.03
LINC00538-201ENST00000626109 MARCH6O60337 910 aa14.86□□□□□ -0.03
LINC00538-201ENST00000626109 CANXP27824 592 aaKnown RBP14.86□□□□□ -0.03
LINC00538-201ENST00000626109 FLIIQ13045 1269 aa14.86□□□□□ -0.03
LINC00538-201ENST00000626109 COL18A1P39060 1754 aa14.85□□□□□ -0.03
LINC00538-201ENST00000626109 LMO7Q8WWI1 1683 aa14.85□□□□□ -0.03
LINC00538-201ENST00000626109 IGSF5Q9NSI5 407 aa14.85□□□□□ -0.03
LINC00538-201ENST00000626109 COL3A1P02461 1466 aaPredicted RBP14.85□□□□□ -0.03
LINC00538-201ENST00000626109 DIAPH1O60610 1272 aaKnown RBP14.84□□□□□ -0.03
LINC00538-201ENST00000626109 CHRM1P11229 460 aaPredicted RBP14.84□□□□□ -0.03
LINC00538-201ENST00000626109 C8orf37Q96NL8 207 aa14.84□□□□□ -0.03
LINC00538-201ENST00000626109 MCCP23508 829 aa14.84□□□□□ -0.03
LINC00538-201ENST00000626109 AXIN2Q9Y2T1 843 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms