RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 SPG7Q9UQ90 795 aa16.57■□□□□ 0.24
LINC00963-216ENST00000623185 DISP2A7MBM2 1401 aa16.56■□□□□ 0.24
LINC00963-216ENST00000623185 DDB1Q16531 1140 aa16.56■□□□□ 0.24
LINC00963-216ENST00000623185 FAM208AQ9UK61 1670 aaKnown RBP16.56■□□□□ 0.24
LINC00963-216ENST00000623185 NEFMP07197 916 aa16.55■□□□□ 0.24
LINC00963-216ENST00000623185 PRKAR2BP31323 418 aa16.55■□□□□ 0.24
LINC00963-216ENST00000623185 PDE3BQ13370 1112 aa16.54■□□□□ 0.24
LINC00963-216ENST00000623185 GLI3P10071 1580 aa16.54■□□□□ 0.24
LINC00963-216ENST00000623185 A0A0G2JS52 829 aa16.53■□□□□ 0.24
LINC00963-216ENST00000623185 MYT1Q01538 1121 aa16.53■□□□□ 0.24
LINC00963-216ENST00000623185 RUNDC1Q96C34 613 aa16.53■□□□□ 0.24
LINC00963-216ENST00000623185 PHACTR3Q96KR7 559 aa16.53■□□□□ 0.24
LINC00963-216ENST00000623185 RGPD1P0DJD0 1748 aa16.53■□□□□ 0.24
LINC00963-216ENST00000623185 FAM9BQ8IZU0 186 aa16.52■□□□□ 0.24
LINC00963-216ENST00000623185 OVOS2A0A0G2JMS6 1433 aa16.52■□□□□ 0.23
LINC00963-216ENST00000623185 MTHFSDQ2M296 383 aaKnown RBP16.51■□□□□ 0.23
LINC00963-216ENST00000623185 KRT27Q7Z3Y8 459 aa16.51■□□□□ 0.23
LINC00963-216ENST00000623185 IFNL2Q8IZJ0 200 aa16.51■□□□□ 0.23
LINC00963-216ENST00000623185 GAS2L2Q8NHY3 880 aa16.51■□□□□ 0.23
LINC00963-216ENST00000623185 MEGF6O75095 1541 aa16.5■□□□□ 0.23
LINC00963-216ENST00000623185 NKX1-1Q15270 411 aaPredicted RBP16.5■□□□□ 0.23
LINC00963-216ENST00000623185 DDX54Q8TDD1 881 aaKnown RBP16.5■□□□□ 0.23
LINC00963-216ENST00000623185 RGPD2P0DJD1 1756 aa16.5■□□□□ 0.23
LINC00963-216ENST00000623185 PCDH11XQ9BZA7 1347 aa16.49■□□□□ 0.23
LINC00963-216ENST00000623185 PCDH11YQ9BZA8 1340 aa16.49■□□□□ 0.23
LINC00963-216ENST00000623185 CYP27B1O15528 508 aa16.49■□□□□ 0.23
LINC00963-216ENST00000623185 AKAP4Q5JQC9 854 aa16.49■□□□□ 0.23
LINC00963-216ENST00000623185 MARCH10Q8NA82 808 aaPredicted RBP16.49■□□□□ 0.23
LINC00963-216ENST00000623185 MAPK8IP3Q9UPT6 1336 aa16.48■□□□□ 0.23
LINC00963-216ENST00000623185 HTATSF1O43719 755 aaKnown RBP16.48■□□□□ 0.23
LINC00963-216ENST00000623185 HSP90AB1P08238 724 aaKnown RBP16.48■□□□□ 0.23
LINC00963-216ENST00000623185 PHKG2P15735 406 aa16.48■□□□□ 0.23
LINC00963-216ENST00000623185 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
LINC00963-216ENST00000623185 C1orf141Q5JVX7 400 aa16.48■□□□□ 0.23
LINC00963-216ENST00000623185 ZNF530Q6P9A1 599 aaPredicted RBP16.47■□□□□ 0.23
LINC00963-216ENST00000623185 CCDC146Q8IYE0 955 aa16.47■□□□□ 0.23
LINC00963-216ENST00000623185 TMPOP42166 694 aaKnown RBP16.46■□□□□ 0.23
LINC00963-216ENST00000623185 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
LINC00963-216ENST00000623185 FAM196AQ6ZSG2 479 aa16.46■□□□□ 0.23
LINC00963-216ENST00000623185 GNAT3A8MTJ3 354 aa16.45■□□□□ 0.22
LINC00963-216ENST00000623185 APAF1O14727 1248 aa16.45■□□□□ 0.22
LINC00963-216ENST00000623185 NGEFQ8N5V2 710 aa16.45■□□□□ 0.22
LINC00963-216ENST00000623185 DCAF5Q96JK2 942 aa16.45■□□□□ 0.22
LINC00963-216ENST00000623185 THSD7AQ9UPZ6 1657 aa16.45■□□□□ 0.22
LINC00963-216ENST00000623185 BCL9O00512 1426 aa16.45■□□□□ 0.22
LINC00963-216ENST00000623185 RGS12O14924 1447 aa16.45■□□□□ 0.22
LINC00963-216ENST00000623185 TNS2Q63HR2 1409 aa16.45■□□□□ 0.22
LINC00963-216ENST00000623185 RIPK4P57078 832 aa16.44■□□□□ 0.22
LINC00963-216ENST00000623185 PARP4Q9UKK3 1724 aaKnown RBP16.42■□□□□ 0.22
LINC00963-216ENST00000623185 ERVV-2B6SEH9 535 aa16.42■□□□□ 0.22
LINC00963-216ENST00000623185 RTF1Q92541 710 aaKnown RBP16.42■□□□□ 0.22
LINC00963-216ENST00000623185 LMOD3Q0VAK6 560 aa16.41■□□□□ 0.22
LINC00963-216ENST00000623185 MPRIPQ6WCQ1 1025 aa16.41■□□□□ 0.22
LINC00963-216ENST00000623185 IL17REQ8NFR9 667 aa16.41■□□□□ 0.22
LINC00963-216ENST00000623185 LGR6Q9HBX8 967 aa16.41■□□□□ 0.22
LINC00963-216ENST00000623185 RNMTO43148 476 aaKnown RBP16.4■□□□□ 0.22
LINC00963-216ENST00000623185 CCDC27Q2M243 656 aa16.4■□□□□ 0.22
LINC00963-216ENST00000623185 FAM182BQ5T319 152 aa16.4■□□□□ 0.22
LINC00963-216ENST00000623185 MAP3K5Q99683 1374 aa16.39■□□□□ 0.21
LINC00963-216ENST00000623185 NEUROD2Q15784 382 aa16.39■□□□□ 0.21
LINC00963-216ENST00000623185 PRIM1P49642 420 aaKnown RBP16.38■□□□□ 0.21
LINC00963-216ENST00000623185 TRIM35Q9UPQ4 493 aa16.38■□□□□ 0.21
LINC00963-216ENST00000623185 RRP7AQ9Y3A4 280 aaKnown RBP16.38■□□□□ 0.21
LINC00963-216ENST00000623185 LRRC37A3O60309 1634 aa16.37■□□□□ 0.21
LINC00963-216ENST00000623185 PKD1L3Q7Z443 1732 aa16.37■□□□□ 0.21
LINC00963-216ENST00000623185 BCL11BQ9C0K0 894 aaPredicted RBP16.37■□□□□ 0.21
LINC00963-216ENST00000623185 WNK3Q9BYP7 1800 aa16.36■□□□□ 0.21
LINC00963-216ENST00000623185 CABP4P57796 275 aa16.36■□□□□ 0.21
LINC00963-216ENST00000623185 MCM10Q7L590 875 aa16.36■□□□□ 0.21
LINC00963-216ENST00000623185 CCDC125Q86Z20 511 aa16.36■□□□□ 0.21
LINC00963-216ENST00000623185 NFATC2IPQ8NCF5 419 aa16.36■□□□□ 0.21
LINC00963-216ENST00000623185 SLC52A2Q9HAB3 445 aa16.36■□□□□ 0.21
LINC00963-216ENST00000623185 CEMIPQ8WUJ3 1361 aa16.36■□□□□ 0.21
LINC00963-216ENST00000623185 ILDR2Q71H61 639 aa16.35■□□□□ 0.21
LINC00963-216ENST00000623185 WWC1Q8IX03 1113 aa16.35■□□□□ 0.21
LINC00963-216ENST00000623185 KCNQ2O43526 872 aa16.34■□□□□ 0.21
LINC00963-216ENST00000623185 CALD1Q05682 793 aaKnown RBP16.34■□□□□ 0.21
LINC00963-216ENST00000623185 TEFQ10587 303 aa16.34■□□□□ 0.21
LINC00963-216ENST00000623185 DCTN1Q14203 1278 aa16.34■□□□□ 0.21
LINC00963-216ENST00000623185 TAF7Q15545 349 aaPredicted RBP16.34■□□□□ 0.21
LINC00963-216ENST00000623185 PIGBQ92521 554 aa16.34■□□□□ 0.21
LINC00963-216ENST00000623185 ACSBG1Q96GR2 724 aa16.34■□□□□ 0.21
LINC00963-216ENST00000623185 TMOD3Q9NYL9 352 aa16.34■□□□□ 0.21
LINC00963-216ENST00000623185 TRIM37O94972 964 aa16.33■□□□□ 0.2
LINC00963-216ENST00000623185 WDR63Q8IWG1 891 aa16.33■□□□□ 0.2
LINC00963-216ENST00000623185 SYTL4Q96C24 671 aaPredicted RBP16.33■□□□□ 0.2
LINC00963-216ENST00000623185 BABAM1Q9NWV8 329 aa16.33■□□□□ 0.2
LINC00963-216ENST00000623185 KDM6AO15550 1401 aaPredicted RBP16.33■□□□□ 0.2
LINC00963-216ENST00000623185 BRWD3Q6RI45 1802 aa16.32■□□□□ 0.2
LINC00963-216ENST00000623185 SHANK3Q9BYB0 1731 aa16.31■□□□□ 0.2
LINC00963-216ENST00000623185 PLSCR1O15162 318 aa16.3■□□□□ 0.2
LINC00963-216ENST00000623185 THUMPD2Q9BTF0 503 aaKnown RBP16.3■□□□□ 0.2
LINC00963-216ENST00000623185 SALL2Q9Y467 1007 aaPredicted RBP16.3■□□□□ 0.2
LINC00963-216ENST00000623185 IL16Q14005 1332 aa16.29■□□□□ 0.2
LINC00963-216ENST00000623185 BTBD11A6QL63 1104 aa16.29■□□□□ 0.2
LINC00963-216ENST00000623185 CHL1O00533 1208 aa16.29■□□□□ 0.2
LINC00963-216ENST00000623185 PTF1AQ7RTS3 328 aa16.29■□□□□ 0.2
LINC00963-216ENST00000623185 SMARCC1Q92922 1105 aaPredicted RBP16.29■□□□□ 0.2
LINC00963-216ENST00000623185 CFAP44Q96MT7 982 aa16.29■□□□□ 0.2
LINC00963-216ENST00000623185 ZNF521Q96K83 1311 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms