RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 PLEKHG2Q9H7P9 1386 aa30.22■■■□□ 2.43
CBWD3-213ENST00000618217 TATP17735 454 aaPredicted RBP30.22■■■□□ 2.43
CBWD3-213ENST00000618217 LRRC37A3O60309 1634 aa30.21■■■□□ 2.43
CBWD3-213ENST00000618217 PKD1L3Q7Z443 1732 aa30.21■■■□□ 2.43
CBWD3-213ENST00000618217 SEPT12Q8IYM1 358 aa30.21■■■□□ 2.43
CBWD3-213ENST00000618217 PRKAR2BP31323 418 aa30.19■■■□□ 2.42
CBWD3-213ENST00000618217 PLEKHF1Q96S99 279 aa30.19■■■□□ 2.42
CBWD3-213ENST00000618217 SHANK3Q9BYB0 1731 aa30.19■■■□□ 2.42
CBWD3-213ENST00000618217 RGS12O14924 1447 aa30.19■■■□□ 2.42
CBWD3-213ENST00000618217 BRWD3Q6RI45 1802 aa30.19■■■□□ 2.42
CBWD3-213ENST00000618217 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.18■■■□□ 2.42
CBWD3-213ENST00000618217 PHACTR3Q96KR7 559 aa30.17■■■□□ 2.42
CBWD3-213ENST00000618217 TNS2Q63HR2 1409 aa30.16■■■□□ 2.42
CBWD3-213ENST00000618217 DDB1Q16531 1140 aa30.15■■■□□ 2.42
CBWD3-213ENST00000618217 ZCRB1Q8TBF4 217 aaKnown RBP30.15■■■□□ 2.42
CBWD3-213ENST00000618217 EXOC5O00471 708 aa30.14■■■□□ 2.42
CBWD3-213ENST00000618217 A0A0G2JS52 829 aa30.14■■■□□ 2.41
CBWD3-213ENST00000618217 MYT1Q01538 1121 aa30.14■■■□□ 2.41
CBWD3-213ENST00000618217 AMOTQ4VCS5 1084 aa30.12■■■□□ 2.41
CBWD3-213ENST00000618217 PLEKHO1Q53GL0 409 aaPredicted RBP30.12■■■□□ 2.41
CBWD3-213ENST00000618217 PNNQ9H307 717 aaKnown RBP30.12■■■□□ 2.41
CBWD3-213ENST00000618217 SPG7Q9UQ90 795 aa30.11■■■□□ 2.41
CBWD3-213ENST00000618217 FAM9BQ8IZU0 186 aa30.11■■■□□ 2.41
CBWD3-213ENST00000618217 CYP27B1O15528 508 aa30.09■■■□□ 2.41
CBWD3-213ENST00000618217 MTHFSDQ2M296 383 aaKnown RBP30.09■■■□□ 2.41
CBWD3-213ENST00000618217 CCDC146Q8IYE0 955 aa30.08■■■□□ 2.41
CBWD3-213ENST00000618217 MARCH10Q8NA82 808 aaPredicted RBP30.08■■■□□ 2.41
CBWD3-213ENST00000618217 RUNDC1Q96C34 613 aa30.08■■■□□ 2.41
CBWD3-213ENST00000618217 PCDH11XQ9BZA7 1347 aa30.06■■■□□ 2.4
CBWD3-213ENST00000618217 PCDH11YQ9BZA8 1340 aa30.06■■■□□ 2.4
CBWD3-213ENST00000618217 PDE3BQ13370 1112 aa30.06■■■□□ 2.4
CBWD3-213ENST00000618217 DDX54Q8TDD1 881 aaKnown RBP30.06■■■□□ 2.4
CBWD3-213ENST00000618217 KRT27Q7Z3Y8 459 aa30.05■■■□□ 2.4
CBWD3-213ENST00000618217 ZNF530Q6P9A1 599 aaPredicted RBP30.04■■■□□ 2.4
CBWD3-213ENST00000618217 PHKG2P15735 406 aa30.04■■■□□ 2.4
CBWD3-213ENST00000618217 GAS2L2Q8NHY3 880 aa30.03■■■□□ 2.4
CBWD3-213ENST00000618217 MAPK8IP3Q9UPT6 1336 aa30.03■■■□□ 2.4
CBWD3-213ENST00000618217 DLG5Q8TDM6 1919 aa30.02■■■□□ 2.4
CBWD3-213ENST00000618217 IFNL2Q8IZJ0 200 aa30.02■■■□□ 2.4
CBWD3-213ENST00000618217 NEFMP07197 916 aa30.01■■■□□ 2.39
CBWD3-213ENST00000618217 NKX1-1Q15270 411 aaPredicted RBP30.01■■■□□ 2.39
CBWD3-213ENST00000618217 NFE2L2Q16236 605 aa30■■■□□ 2.39
CBWD3-213ENST00000618217 AKAP4Q5JQC9 854 aa30■■■□□ 2.39
CBWD3-213ENST00000618217 FAM182BQ5T319 152 aa30■■■□□ 2.39
CBWD3-213ENST00000618217 BCL9O00512 1426 aa29.98■■■□□ 2.39
CBWD3-213ENST00000618217 TMPOP42166 694 aaKnown RBP29.98■■■□□ 2.39
CBWD3-213ENST00000618217 C1orf141Q5JVX7 400 aa29.97■■■□□ 2.39
CBWD3-213ENST00000618217 APAF1O14727 1248 aa29.96■■■□□ 2.39
CBWD3-213ENST00000618217 ADAMTS7Q9UKP4 1686 aa29.96■■■□□ 2.39
CBWD3-213ENST00000618217 VIRMAQ69YN4 1812 aaKnown RBP29.96■■■□□ 2.39
CBWD3-213ENST00000618217 MAP3K5Q99683 1374 aa29.95■■■□□ 2.39
CBWD3-213ENST00000618217 EP400Q96L91 3159 aa29.95■■■□□ 2.38
CBWD3-213ENST00000618217 SCN11AQ9UI33 1791 aa29.94■■■□□ 2.38
CBWD3-213ENST00000618217 KDM6AO15550 1401 aaPredicted RBP29.94■■■□□ 2.38
CBWD3-213ENST00000618217 GNAT3A8MTJ3 354 aa29.94■■■□□ 2.38
CBWD3-213ENST00000618217 SBF2Q86WG5 1849 aa29.94■■■□□ 2.38
CBWD3-213ENST00000618217 TOGARAM1Q9Y4F4 1720 aa29.94■■■□□ 2.38
CBWD3-213ENST00000618217 HSP90AB1P08238 724 aaKnown RBP29.93■■■□□ 2.38
CBWD3-213ENST00000618217 RRP7AQ9Y3A4 280 aaKnown RBP29.93■■■□□ 2.38
CBWD3-213ENST00000618217 MPRIPQ6WCQ1 1025 aa29.92■■■□□ 2.38
CBWD3-213ENST00000618217 FAM196AQ6ZSG2 479 aa29.92■■■□□ 2.38
CBWD3-213ENST00000618217 DCAF5Q96JK2 942 aa29.92■■■□□ 2.38
CBWD3-213ENST00000618217 RIPK4P57078 832 aa29.91■■■□□ 2.38
CBWD3-213ENST00000618217 KAT6BQ8WYB5 2073 aa29.91■■■□□ 2.38
CBWD3-213ENST00000618217 HTATSF1O43719 755 aaKnown RBP29.9■■■□□ 2.38
CBWD3-213ENST00000618217 IL17REQ8NFR9 667 aa29.9■■■□□ 2.38
CBWD3-213ENST00000618217 LGR6Q9HBX8 967 aa29.9■■■□□ 2.38
CBWD3-213ENST00000618217 DOT1LQ8TEK3 1739 aa29.9■■■□□ 2.38
CBWD3-213ENST00000618217 ILDR2Q71H61 639 aa29.89■■■□□ 2.38
CBWD3-213ENST00000618217 NEUROD2Q15784 382 aa29.89■■■□□ 2.37
CBWD3-213ENST00000618217 TRIM35Q9UPQ4 493 aa29.89■■■□□ 2.37
CBWD3-213ENST00000618217 ITGB4P16144 1822 aa29.88■■■□□ 2.37
CBWD3-213ENST00000618217 RNMTO43148 476 aaKnown RBP29.88■■■□□ 2.37
CBWD3-213ENST00000618217 CEMIPQ8WUJ3 1361 aa29.87■■■□□ 2.37
CBWD3-213ENST00000618217 SENP3-EIF4A1A0A087X0R7 540 aa29.86■■■□□ 2.37
CBWD3-213ENST00000618217 NCBP3Q53F19 620 aaKnown RBP29.86■■■□□ 2.37
CBWD3-213ENST00000618217 ERVV-2B6SEH9 535 aa29.85■■■□□ 2.37
CBWD3-213ENST00000618217 DCTN1Q14203 1278 aa29.85■■■□□ 2.37
CBWD3-213ENST00000618217 MCM10Q7L590 875 aa29.85■■■□□ 2.37
CBWD3-213ENST00000618217 NHSQ6T4R5 1651 aa29.84■■■□□ 2.37
CBWD3-213ENST00000618217 KCNQ2O43526 872 aa29.83■■■□□ 2.37
CBWD3-213ENST00000618217 RTF1Q92541 710 aaKnown RBP29.83■■■□□ 2.37
CBWD3-213ENST00000618217 ACSBG1Q96GR2 724 aa29.83■■■□□ 2.37
CBWD3-213ENST00000618217 MRC1P22897 1456 aa29.83■■■□□ 2.37
CBWD3-213ENST00000618217 PRIM1P49642 420 aaKnown RBP29.82■■■□□ 2.36
CBWD3-213ENST00000618217 LMOD3Q0VAK6 560 aa29.82■■■□□ 2.36
CBWD3-213ENST00000618217 CCDC27Q2M243 656 aa29.82■■■□□ 2.36
CBWD3-213ENST00000618217 PTF1AQ7RTS3 328 aa29.82■■■□□ 2.36
CBWD3-213ENST00000618217 SIPA1L3O60292 1781 aaPredicted RBP29.81■■■□□ 2.36
CBWD3-213ENST00000618217 NGEFQ8N5V2 710 aa29.8■■■□□ 2.36
CBWD3-213ENST00000618217 THUMPD2Q9BTF0 503 aaKnown RBP29.8■■■□□ 2.36
CBWD3-213ENST00000618217 SLC52A2Q9HAB3 445 aa29.79■■■□□ 2.36
CBWD3-213ENST00000618217 NFATC2IPQ8NCF5 419 aa29.78■■■□□ 2.36
CBWD3-213ENST00000618217 TRIM37O94972 964 aa29.78■■■□□ 2.36
CBWD3-213ENST00000618217 BCL11BQ9C0K0 894 aaPredicted RBP29.78■■■□□ 2.36
CBWD3-213ENST00000618217 WWC1Q8IX03 1113 aa29.77■■■□□ 2.36
CBWD3-213ENST00000618217 PIGBQ92521 554 aa29.77■■■□□ 2.36
CBWD3-213ENST00000618217 CABP4P57796 275 aa29.76■■■□□ 2.35
CBWD3-213ENST00000618217 BTAF1O14981 1849 aa29.76■■■□□ 2.35
CBWD3-213ENST00000618217 SYTL4Q96C24 671 aaPredicted RBP29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms