RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 PPP6R1Q9UPN7 881 aa16.08■□□□□ 0.16
CHD1-212ENST00000614616 TOP1P11387 765 aaKnown RBP16.08■□□□□ 0.16
CHD1-212ENST00000614616 ANKRD62A6NC57 917 aa16.07■□□□□ 0.16
CHD1-212ENST00000614616 BAG4O95429 457 aaKnown RBP16.07■□□□□ 0.16
CHD1-212ENST00000614616 HMGB1P09429 215 aaKnown RBP16.07■□□□□ 0.16
CHD1-212ENST00000614616 ZFYVE27Q5T4F4 411 aa16.07■□□□□ 0.16
CHD1-212ENST00000614616 RAI14Q9P0K7 980 aa16.07■□□□□ 0.16
CHD1-212ENST00000614616 SYCP1Q15431 976 aa16.07■□□□□ 0.16
CHD1-212ENST00000614616 UBE2HP62256 183 aa16.06■□□□□ 0.16
CHD1-212ENST00000614616 WWC1Q8IX03 1113 aa16.06■□□□□ 0.16
CHD1-212ENST00000614616 CCDC9Q9Y3X0 531 aaKnown RBP16.06■□□□□ 0.16
CHD1-212ENST00000614616 STX1AQ16623 288 aa16.06■□□□□ 0.16
CHD1-212ENST00000614616 SCAND2PQ9GZW5 306 aaPredicted RBP16.06■□□□□ 0.16
CHD1-212ENST00000614616 OTUD6BQ8N6M0 293 aa16.06■□□□□ 0.16
CHD1-212ENST00000614616 TCEAL9Q9UHQ7 104 aa16.06■□□□□ 0.16
CHD1-212ENST00000614616 HSF2BPO75031 334 aa16.06■□□□□ 0.16
CHD1-212ENST00000614616 CEP63Q96MT8 703 aa16.06■□□□□ 0.16
CHD1-212ENST00000614616 ERC1Q8IUD2 1116 aa16.06■□□□□ 0.16
CHD1-212ENST00000614616 TBC1D32Q96NH3 1257 aa16.06■□□□□ 0.16
CHD1-212ENST00000614616 IFFO1Q0D2I5 559 aa16.05■□□□□ 0.16
CHD1-212ENST00000614616 SMC1AQ14683 1233 aaKnown RBP16.05■□□□□ 0.16
CHD1-212ENST00000614616 NOB1Q9ULX3 412 aaKnown RBP16.05■□□□□ 0.16
CHD1-212ENST00000614616 FBXO3Q9UK99 471 aa16.05■□□□□ 0.16
CHD1-212ENST00000614616 CCDC50Q8IVM0 306 aa16.05■□□□□ 0.16
CHD1-212ENST00000614616 DIAPH1O60610 1272 aaKnown RBP16.05■□□□□ 0.16
CHD1-212ENST00000614616 BCAR3O75815 825 aa16.05■□□□□ 0.16
CHD1-212ENST00000614616 NAA15Q9BXJ9 866 aaKnown RBP16.05■□□□□ 0.16
CHD1-212ENST00000614616 SSFA2P28290 1259 aa16.04■□□□□ 0.16
CHD1-212ENST00000614616 CEP57Q86XR8 500 aa16.04■□□□□ 0.16
CHD1-212ENST00000614616 RRAGDQ9NQL2 400 aaPredicted RBP16.04■□□□□ 0.16
CHD1-212ENST00000614616 BCCIPQ9P287 314 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHD1-212ENST00000614616 FGD6Q6ZV73 1430 aa16.04■□□□□ 0.16
CHD1-212ENST00000614616 DMTNQ08495 405 aa16.04■□□□□ 0.16
CHD1-212ENST00000614616 SLU7O95391 586 aaKnown RBP16.04■□□□□ 0.16
CHD1-212ENST00000614616 FKBP5Q13451 457 aaPredicted RBP16.04■□□□□ 0.16
CHD1-212ENST00000614616 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHD1-212ENST00000614616 MYRIPQ8NFW9 859 aa16.04■□□□□ 0.16
CHD1-212ENST00000614616 LRCH2Q5VUJ6 765 aa16.03■□□□□ 0.16
CHD1-212ENST00000614616 CEP112Q8N8E3 955 aa16.03■□□□□ 0.16
CHD1-212ENST00000614616 FHOD3Q2V2M9 1422 aa16.03■□□□□ 0.16
CHD1-212ENST00000614616 CECR2Q9BXF3 1484 aa16.03■□□□□ 0.16
CHD1-212ENST00000614616 TAF4BQ92750 862 aa16.03■□□□□ 0.16
CHD1-212ENST00000614616 NOL7Q9UMY1 257 aaKnown RBP16.03■□□□□ 0.16
CHD1-212ENST00000614616 ERICH3Q5RHP9 1530 aa16.02■□□□□ 0.16
CHD1-212ENST00000614616 DDX58O95786 925 aaKnown RBP16.02■□□□□ 0.16
CHD1-212ENST00000614616 UBTFL1P0CB47 393 aaPredicted RBP16.02■□□□□ 0.16
CHD1-212ENST00000614616 B4GALNT4Q76KP1 1039 aa16.02■□□□□ 0.16
CHD1-212ENST00000614616 DAAM2Q86T65 1068 aa16.02■□□□□ 0.16
CHD1-212ENST00000614616 NBPF11Q86T75 865 aa16.02■□□□□ 0.16
CHD1-212ENST00000614616 NAA25Q14CX7 972 aa16.02■□□□□ 0.16
CHD1-212ENST00000614616 SART3Q15020 963 aaKnown RBP16.02■□□□□ 0.16
CHD1-212ENST00000614616 SPA17Q15506 151 aa16.02■□□□□ 0.16
CHD1-212ENST00000614616 WDR63Q8IWG1 891 aa16.02■□□□□ 0.16
CHD1-212ENST00000614616 SMARCA4P51532 1647 aa16.02■□□□□ 0.15
CHD1-212ENST00000614616 BANK1Q8NDB2 785 aa16.02■□□□□ 0.15
CHD1-212ENST00000614616 SEPT6Q14141 434 aa16.01■□□□□ 0.15
CHD1-212ENST00000614616 AMPHP49418 695 aa16.01■□□□□ 0.15
CHD1-212ENST00000614616 ATF7IPQ6VMQ6 1270 aa16.01■□□□□ 0.15
CHD1-212ENST00000614616 DDX19AQ9NUU7 478 aaKnown RBP16.01■□□□□ 0.15
CHD1-212ENST00000614616 MCM6Q14566 821 aa16.01■□□□□ 0.15
CHD1-212ENST00000614616 SCLT1Q96NL6 688 aa16.01■□□□□ 0.15
CHD1-212ENST00000614616 NBPF8Q3BBV2 869 aa16.01■□□□□ 0.15
CHD1-212ENST00000614616 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.01■□□□□ 0.152e-6■■■■■ 64.9
CHD1-212ENST00000614616 GNAI2P04899 355 aa16.01■□□□□ 0.15
CHD1-212ENST00000614616 GOLGA1Q92805 767 aa16.01■□□□□ 0.15
CHD1-212ENST00000614616 KIF5BP33176 963 aa16■□□□□ 0.15
CHD1-212ENST00000614616 FMNL3Q8IVF7 1028 aa16■□□□□ 0.15
CHD1-212ENST00000614616 PDRG1Q9NUG6 133 aa16■□□□□ 0.15
CHD1-212ENST00000614616 PAFAH1B1P43034 410 aa16■□□□□ 0.15
CHD1-212ENST00000614616 MPHOSPH10O00566 681 aaKnown RBP16■□□□□ 0.15
CHD1-212ENST00000614616 DRC1Q96MC2 740 aa16■□□□□ 0.15
CHD1-212ENST00000614616 VPS18Q9P253 973 aa16■□□□□ 0.15
CHD1-212ENST00000614616 GNAI3P08754 354 aa16■□□□□ 0.15
CHD1-212ENST00000614616 MAP2K2P36507 400 aa16■□□□□ 0.15
CHD1-212ENST00000614616 CCDC121Q6ZUS5 278 aa16■□□□□ 0.15
CHD1-212ENST00000614616 POTEDQ86YR6 584 aa16■□□□□ 0.15
CHD1-212ENST00000614616 NSRP1Q9H0G5 558 aaKnown RBP16■□□□□ 0.15
CHD1-212ENST00000614616 OPA1O60313 960 aa16■□□□□ 0.15
CHD1-212ENST00000614616 CCDC113Q9H0I3 377 aa16■□□□□ 0.15
CHD1-212ENST00000614616 UTP14CQ5TAP6 766 aaKnown RBP16■□□□□ 0.15
CHD1-212ENST00000614616 CKAP4Q07065 602 aaKnown RBP15.99■□□□□ 0.15
CHD1-212ENST00000614616 C6orf163Q5TEZ5 329 aa15.99■□□□□ 0.15
CHD1-212ENST00000614616 PIP4K2BP78356 416 aa15.99■□□□□ 0.15
CHD1-212ENST00000614616 FSD1Q9BTV5 496 aa15.99■□□□□ 0.15
CHD1-212ENST00000614616 TIAM1Q13009 1591 aa15.99■□□□□ 0.15
CHD1-212ENST00000614616 CDK5RAP3Q96JB5 506 aa15.99■□□□□ 0.15
CHD1-212ENST00000614616 ZNF330Q9Y3S2 320 aaPredicted RBP15.99■□□□□ 0.15
CHD1-212ENST00000614616 EHBP1Q8NDI1 1231 aa15.99■□□□□ 0.15
CHD1-212ENST00000614616 CDKL5O76039 1030 aa15.99■□□□□ 0.15
CHD1-212ENST00000614616 CEP83Q9Y592 693 aa15.98■□□□□ 0.15
CHD1-212ENST00000614616 HDXQ7Z353 690 aa15.98■□□□□ 0.15
CHD1-212ENST00000614616 RBM27Q9P2N5 1060 aaKnown RBP15.98■□□□□ 0.15
CHD1-212ENST00000614616 CASTP20810 708 aaKnown RBP15.98■□□□□ 0.15
CHD1-212ENST00000614616 CFAP57Q96MR6 1250 aa15.98■□□□□ 0.15
CHD1-212ENST00000614616 MRVI1Q9Y6F6 885 aa15.98■□□□□ 0.15
CHD1-212ENST00000614616 TMC6Q7Z403 805 aa15.98■□□□□ 0.15
CHD1-212ENST00000614616 TUBBP07437 444 aa15.97■□□□□ 0.15
CHD1-212ENST00000614616 SH2B1Q9NRF2 756 aaPredicted RBP15.97■□□□□ 0.15
CHD1-212ENST00000614616 BRD2P25440 801 aaKnown RBP15.97■□□□□ 0.15
CHD1-212ENST00000614616 MYOM3Q5VTT5 1437 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms