RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 EIF4A2Q14240 407 aaKnown RBP10.71□□□□□ -0.69
TARDBP-213ENST00000611963 NWD2Q9ULI1 1742 aa10.71□□□□□ -0.69
TARDBP-213ENST00000611963 RGPD2P0DJD1 1756 aa10.7□□□□□ -0.7
TARDBP-213ENST00000611963 RGPD1P0DJD0 1748 aa10.7□□□□□ -0.7
TARDBP-213ENST00000611963 NRAPQ86VF7 1730 aa10.7□□□□□ -0.7
TARDBP-213ENST00000611963 ZBTB7CA1YPR0 619 aa10.7□□□□□ -0.7
TARDBP-213ENST00000611963 HSP90AB2PQ58FF8 381 aa10.7□□□□□ -0.7
TARDBP-213ENST00000611963 RUNDC1Q96C34 613 aa10.7□□□□□ -0.7
TARDBP-213ENST00000611963 DLG5Q8TDM6 1919 aa10.69□□□□□ -0.7
TARDBP-213ENST00000611963 HMOX1P09601 288 aa10.69□□□□□ -0.7
TARDBP-213ENST00000611963 HOXC9P31274 260 aa10.69□□□□□ -0.7
TARDBP-213ENST00000611963 VPS72Q15906 364 aa10.69□□□□□ -0.7
TARDBP-213ENST00000611963 FBXO3Q9UK99 471 aa10.69□□□□□ -0.7
TARDBP-213ENST00000611963 RRP7AQ9Y3A4 280 aaKnown RBP10.69□□□□□ -0.7
TARDBP-213ENST00000611963 COL14A1Q05707 1796 aaKnown RBP10.68□□□□□ -0.7
TARDBP-213ENST00000611963 GCP02774 474 aa10.68□□□□□ -0.7
TARDBP-213ENST00000611963 CD44P16070 742 aaKnown RBP10.68□□□□□ -0.7
TARDBP-213ENST00000611963 RSPH6AQ9H0K4 717 aa10.68□□□□□ -0.7
TARDBP-213ENST00000611963 RTL1A6NKG5 1358 aa10.67□□□□□ -0.7
TARDBP-213ENST00000611963 KIAA0232Q92628 1395 aa10.67□□□□□ -0.7
TARDBP-213ENST00000611963 PRKAR2BP31323 418 aa10.67□□□□□ -0.7
TARDBP-213ENST00000611963 NEUROD2Q15784 382 aa10.67□□□□□ -0.7
TARDBP-213ENST00000611963 TCP11L2Q8N4U5 519 aa10.67□□□□□ -0.7
TARDBP-213ENST00000611963 KCNH5Q8NCM2 988 aa10.67□□□□□ -0.7
TARDBP-213ENST00000611963 PLEKHF1Q96S99 279 aa10.67□□□□□ -0.7
TARDBP-213ENST00000611963 BTG4Q9NY30 223 aa10.67□□□□□ -0.7
TARDBP-213ENST00000611963 KIF24Q5T7B8 1368 aa10.66□□□□□ -0.7
TARDBP-213ENST00000611963 ZNF521Q96K83 1311 aa10.66□□□□□ -0.7
TARDBP-213ENST00000611963 MAPK8IP3Q9UPT6 1336 aa10.66□□□□□ -0.7
TARDBP-213ENST00000611963 ONECUT3O60422 494 aaPredicted RBP10.66□□□□□ -0.7
TARDBP-213ENST00000611963 VASPP50552 380 aaPredicted RBP10.66□□□□□ -0.7
TARDBP-213ENST00000611963 CHRNA2Q15822 529 aa10.66□□□□□ -0.7
TARDBP-213ENST00000611963 AEBP1Q8IUX7 1158 aa10.66□□□□□ -0.7
TARDBP-213ENST00000611963 LTV1Q96GA3 475 aaPredicted RBP10.66□□□□□ -0.7
TARDBP-213ENST00000611963 CDCA7LQ96GN5 454 aa10.66□□□□□ -0.7
TARDBP-213ENST00000611963 PRDM11Q9NQV5 511 aa10.66□□□□□ -0.7
TARDBP-213ENST00000611963 EP400Q96L91 3159 aa10.65□□□□□ -0.7
TARDBP-213ENST00000611963 COL18A1P39060 1754 aa10.65□□□□□ -0.7
TARDBP-213ENST00000611963 FCHSD2O94868 740 aa10.65□□□□□ -0.7
TARDBP-213ENST00000611963 ZC3H6P61129 1189 aaKnown RBP10.65□□□□□ -0.7
TARDBP-213ENST00000611963 ARHGEF25Q86VW2 580 aa10.65□□□□□ -0.7
TARDBP-213ENST00000611963 IP6K1Q92551 441 aa10.65□□□□□ -0.7
TARDBP-213ENST00000611963 BRWD3Q6RI45 1802 aa10.64□□□□□ -0.71
TARDBP-213ENST00000611963 TMPOP42166 694 aaKnown RBP10.64□□□□□ -0.71
TARDBP-213ENST00000611963 SULT6B1Q6IMI4 303 aa10.64□□□□□ -0.71
TARDBP-213ENST00000611963 SEPT12Q8IYM1 358 aa10.64□□□□□ -0.71
TARDBP-213ENST00000611963 CPDO75976 1380 aa10.64□□□□□ -0.71
TARDBP-213ENST00000611963 LMO7Q8WWI1 1683 aa10.63□□□□□ -0.71
TARDBP-213ENST00000611963 PDE3BQ13370 1112 aa10.63□□□□□ -0.71
TARDBP-213ENST00000611963 SP7Q8TDD2 431 aaPredicted RBP10.63□□□□□ -0.71
TARDBP-213ENST00000611963 PHACTR3Q96KR7 559 aa10.63□□□□□ -0.71
TARDBP-213ENST00000611963 EYA1Q99502 592 aa10.63□□□□□ -0.71
TARDBP-213ENST00000611963 PNNQ9H307 717 aaKnown RBP10.63□□□□□ -0.71
TARDBP-213ENST00000611963 CCDC9Q9Y3X0 531 aaKnown RBP10.63□□□□□ -0.71
TARDBP-213ENST00000611963 GTF3C3Q9Y5Q9 886 aa10.63□□□□□ -0.71
TARDBP-213ENST00000611963 CAMTA1Q9Y6Y1 1673 aa10.63□□□□□ -0.71
TARDBP-213ENST00000611963 SPATA31A5Q5VU36 1347 aa10.62□□□□□ -0.71
TARDBP-213ENST00000611963 SPATA31A7Q8IWB4 1347 aa10.62□□□□□ -0.71
TARDBP-213ENST00000611963 IGSF1Q8N6C5 1336 aa10.62□□□□□ -0.71
TARDBP-213ENST00000611963 GOLGA2Q08379 1002 aa10.62□□□□□ -0.71
TARDBP-213ENST00000611963 FAM98CQ17RN3 349 aaKnown RBP10.62□□□□□ -0.71
TARDBP-213ENST00000611963 WWC1Q8IX03 1113 aa10.62□□□□□ -0.71
TARDBP-213ENST00000611963 NGEFQ8N5V2 710 aa10.62□□□□□ -0.71
TARDBP-213ENST00000611963 USHBP1Q8N6Y0 703 aa10.62□□□□□ -0.71
TARDBP-213ENST00000611963 NEFMP07197 916 aa10.61□□□□□ -0.71
TARDBP-213ENST00000611963 RIPK4P57078 832 aa10.61□□□□□ -0.71
TARDBP-213ENST00000611963 NFE2L2Q16236 605 aa10.61□□□□□ -0.71
TARDBP-213ENST00000611963 AXIN2Q9Y2T1 843 aa10.61□□□□□ -0.71
TARDBP-213ENST00000611963 SPATA31A1Q5TZJ5 1347 aa10.6□□□□□ -0.71
TARDBP-213ENST00000611963 THSD7AQ9UPZ6 1657 aa10.6□□□□□ -0.71
TARDBP-213ENST00000611963 SLFN5Q08AF3 891 aa10.6□□□□□ -0.71
TARDBP-213ENST00000611963 CCDC27Q2M243 656 aa10.6□□□□□ -0.71
TARDBP-213ENST00000611963 ANKRD24Q8TF21 1146 aa10.6□□□□□ -0.71
TARDBP-213ENST00000611963 STRN4Q9NRL3 753 aa10.6□□□□□ -0.71
TARDBP-213ENST00000611963 TRIM35Q9UPQ4 493 aa10.6□□□□□ -0.71
TARDBP-213ENST00000611963 SUPT16HQ9Y5B9 1047 aaKnown RBP10.6□□□□□ -0.71
TARDBP-213ENST00000611963 KDRP35968 1356 aa10.6□□□□□ -0.71
TARDBP-213ENST00000611963 ABCC6O95255 1503 aa10.59□□□□□ -0.71
TARDBP-213ENST00000611963 NBPF6Q5VWK0 638 aa10.59□□□□□ -0.71
TARDBP-213ENST00000611963 DUSP27Q5VZP5 1158 aa10.59□□□□□ -0.71
TARDBP-213ENST00000611963 KRT27Q7Z3Y8 459 aa10.59□□□□□ -0.71
TARDBP-213ENST00000611963 NBPF4Q96M43 638 aa10.59□□□□□ -0.71
TARDBP-213ENST00000611963 TSPYL2Q9H2G4 693 aaPredicted RBP10.59□□□□□ -0.71
TARDBP-213ENST00000611963 VIRMAQ69YN4 1812 aaKnown RBP10.58□□□□□ -0.72
TARDBP-213ENST00000611963 FAM208AQ9UK61 1670 aaKnown RBP10.58□□□□□ -0.72
TARDBP-213ENST00000611963 COL5A2P05997 1499 aaPredicted RBP10.58□□□□□ -0.72
TARDBP-213ENST00000611963 E9PSI1 815 aa10.58□□□□□ -0.72
TARDBP-213ENST00000611963 LARP1Q6PKG0 1096 aaKnown RBP10.58□□□□□ -0.72
TARDBP-213ENST00000611963 RASEFQ8IZ41 740 aa10.58□□□□□ -0.72
TARDBP-213ENST00000611963 A0A0G2JS52 829 aa10.57□□□□□ -0.72
TARDBP-213ENST00000611963 MYT1Q01538 1121 aa10.57□□□□□ -0.72
TARDBP-213ENST00000611963 WDR63Q8IWG1 891 aa10.57□□□□□ -0.72
TARDBP-213ENST00000611963 TRMT2AQ8IZ69 625 aaKnown RBP10.57□□□□□ -0.72
TARDBP-213ENST00000611963 THUMPD2Q9BTF0 503 aaKnown RBP10.57□□□□□ -0.72
TARDBP-213ENST00000611963 NCAPD2Q15021 1401 aa10.57□□□□□ -0.72
TARDBP-213ENST00000611963 ERBB3P21860 1342 aa10.57□□□□□ -0.72
TARDBP-213ENST00000611963 EVA1CP58658 441 aa10.56□□□□□ -0.72
TARDBP-213ENST00000611963 FAM182BQ5T319 152 aa10.56□□□□□ -0.72
TARDBP-213ENST00000611963 CCDC125Q86Z20 511 aa10.56□□□□□ -0.72
TARDBP-213ENST00000611963 IFNLR1Q8IU57 520 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms