RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 PTF1AQ7RTS3 328 aa35.32■■■■□ 3.24
VEGFA-226ENST00000611736 SHANK3Q9BYB0 1731 aa35.32■■■■□ 3.24
VEGFA-226ENST00000611736 MTHFSP49914 203 aa35.31■■■■□ 3.24
VEGFA-226ENST00000611736 BCL11BQ9C0K0 894 aaPredicted RBP35.3■■■■□ 3.24
VEGFA-226ENST00000611736 EZH2Q15910 746 aaKnown RBP35.29■■■■□ 3.24
VEGFA-226ENST00000611736 ACSBG1Q96GR2 724 aa35.29■■■■□ 3.24
VEGFA-226ENST00000611736 KCNQ2O43526 872 aa35.26■■■■□ 3.24
VEGFA-226ENST00000611736 CAMKK2Q96RR4 588 aa35.26■■■■□ 3.24
VEGFA-226ENST00000611736 IGSF1Q8N6C5 1336 aa35.25■■■■□ 3.23
VEGFA-226ENST00000611736 NHSQ6T4R5 1651 aa35.24■■■■□ 3.23
VEGFA-226ENST00000611736 IL13P35225 146 aa35.21■■■■□ 3.23
VEGFA-226ENST00000611736 PCDH11XQ9BZA7 1347 aa35.21■■■■□ 3.23
VEGFA-226ENST00000611736 PCDH11YQ9BZA8 1340 aa35.21■■■■□ 3.23
VEGFA-226ENST00000611736 PARD3Q8TEW0 1356 aa35.21■■■■□ 3.23
VEGFA-226ENST00000611736 PKD1L3Q7Z443 1732 aa35.2■■■■□ 3.23
VEGFA-226ENST00000611736 AEBP1Q8IUX7 1158 aa35.17■■■■□ 3.22
VEGFA-226ENST00000611736 DOT1LQ8TEK3 1739 aa35.17■■■■□ 3.22
VEGFA-226ENST00000611736 DDX10Q13206 875 aaKnown RBP35.16■■■■□ 3.22
VEGFA-226ENST00000611736 SPG7Q9UQ90 795 aa35.16■■■■□ 3.22
VEGFA-226ENST00000611736 RREB1Q92766 1687 aa35.15■■■■□ 3.22
VEGFA-226ENST00000611736 PLSCR1O15162 318 aa35.15■■■■□ 3.22
VEGFA-226ENST00000611736 CYP27B1O15528 508 aa35.15■■■■□ 3.22
VEGFA-226ENST00000611736 BTAF1O14981 1849 aa35.14■■■■□ 3.22
VEGFA-226ENST00000611736 SULT6B1Q6IMI4 303 aa35.14■■■■□ 3.22
VEGFA-226ENST00000611736 SYTL4Q96C24 671 aaPredicted RBP35.14■■■■□ 3.22
VEGFA-226ENST00000611736 RGPD3A6NKT7 1758 aaPredicted RBP35.13■■■■□ 3.21
VEGFA-226ENST00000611736 RGPD4Q7Z3J3 1758 aa35.13■■■■□ 3.21
VEGFA-226ENST00000611736 DIAPH1O60610 1272 aaKnown RBP35.13■■■■□ 3.21
VEGFA-226ENST00000611736 PRIM1P49642 420 aaKnown RBP35.12■■■■□ 3.21
VEGFA-226ENST00000611736 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.11■■■■□ 3.217e-31■□□□□ 9.1
VEGFA-226ENST00000611736 NUP188Q5SRE5 1749 aa35.11■■■■□ 3.21
VEGFA-226ENST00000611736 PPP2R1AP30153 589 aa35.1■■■■□ 3.21
VEGFA-226ENST00000611736 COL3A1P02461 1466 aaPredicted RBP35.09■■■■□ 3.21
VEGFA-226ENST00000611736 KDRP35968 1356 aa35.07■■■■□ 3.2
VEGFA-226ENST00000611736 PLEKHG2Q9H7P9 1386 aa35.05■■■■□ 3.2
VEGFA-226ENST00000611736 PSDA5PKW4 1024 aaPredicted RBP35.05■■■■□ 3.2
VEGFA-226ENST00000611736 HMOX1P09601 288 aa35.05■■■■□ 3.2
VEGFA-226ENST00000611736 PLEKHO1Q53GL0 409 aaPredicted RBP35.04■■■■□ 3.2
VEGFA-226ENST00000611736 PROM2Q8N271 834 aa35.04■■■■□ 3.2
VEGFA-226ENST00000611736 CFAP53Q96M91 514 aa35.04■■■■□ 3.2
VEGFA-226ENST00000611736 PHKG2P15735 406 aa35.03■■■■□ 3.2
VEGFA-226ENST00000611736 TXNRD1Q16881 649 aa35.03■■■■□ 3.2
VEGFA-226ENST00000611736 IFNL2Q8IZJ0 200 aa35.03■■■■□ 3.2
VEGFA-226ENST00000611736 U2SURPO15042 1029 aaKnown RBP35.02■■■■□ 3.2
VEGFA-226ENST00000611736 TOGARAM1Q9Y4F4 1720 aa35.02■■■■□ 3.2
VEGFA-226ENST00000611736 SRCAPQ6ZRS2 3230 aa35.02■■■■□ 3.2
VEGFA-226ENST00000611736 R3HDM1Q15032 1099 aaKnown RBP35.01■■■■□ 3.2
VEGFA-226ENST00000611736 NKX1-1Q15270 411 aaPredicted RBP35.01■■■■□ 3.2
VEGFA-226ENST00000611736 AMOTQ4VCS5 1084 aa35■■■■□ 3.19
VEGFA-226ENST00000611736 ZNF530Q6P9A1 599 aaPredicted RBP35■■■■□ 3.19
VEGFA-226ENST00000611736 NBPF14Q5TI25 921 aa34.99■■■■□ 3.19
VEGFA-226ENST00000611736 ITGB4P16144 1822 aa34.97■■■■□ 3.19
VEGFA-226ENST00000611736 MPRIPQ6WCQ1 1025 aa34.97■■■■□ 3.19
VEGFA-226ENST00000611736 ANO8Q9HCE9 1232 aaPredicted RBP34.93■■■■□ 3.18
VEGFA-226ENST00000611736 C1orf141Q5JVX7 400 aa34.92■■■■□ 3.18
VEGFA-226ENST00000611736 HSP90AB1P08238 724 aaKnown RBP34.9■■■■□ 3.18
VEGFA-226ENST00000611736 RALBP1Q15311 655 aa34.9■■■■□ 3.18
VEGFA-226ENST00000611736 NUDCQ9Y266 331 aa34.9■■■■□ 3.18
VEGFA-226ENST00000611736 PIGBQ92521 554 aa34.89■■■■□ 3.18
VEGFA-226ENST00000611736 DCAF5Q96JK2 942 aa34.88■■■■□ 3.17
VEGFA-226ENST00000611736 LRRC4BQ9NT99 713 aa34.88■■■■□ 3.17
VEGFA-226ENST00000611736 TMOD3Q9NYL9 352 aa34.88■■■■□ 3.17
VEGFA-226ENST00000611736 LY75O60449 1722 aa34.87■■■■□ 3.17
VEGFA-226ENST00000611736 ZNF316A6NFI3 1004 aaPredicted RBP34.86■■■■□ 3.17
VEGFA-226ENST00000611736 KCNQ4P56696 695 aa34.86■■■■□ 3.17
VEGFA-226ENST00000611736 KDM6AO15550 1401 aaPredicted RBP34.86■■■■□ 3.17
VEGFA-226ENST00000611736 SLC27A3Q5K4L6 730 aa34.85■■■■□ 3.17
VEGFA-226ENST00000611736 U2AF1L5P0DN76 240 aaPredicted RBP34.84■■■■□ 3.17
VEGFA-226ENST00000611736 U2AF1Q01081 240 aaKnown RBP eCLIP34.84■■■■□ 3.172e-10■□□□□ 9.4
VEGFA-226ENST00000611736 STK32BQ9NY57 414 aa34.84■■■■□ 3.17
VEGFA-226ENST00000611736 MTHFSDQ2M296 383 aaKnown RBP34.83■■■■□ 3.17
VEGFA-226ENST00000611736 PALLDQ8WX93 1383 aa34.83■■■■□ 3.17
VEGFA-226ENST00000611736 LRP5O75197 1615 aa34.82■■■■□ 3.16
VEGFA-226ENST00000611736 PAPPAQ13219 1627 aa34.82■■■■□ 3.16
VEGFA-226ENST00000611736 ERVV-2B6SEH9 535 aa34.82■■■■□ 3.16
VEGFA-226ENST00000611736 AKAP4Q5JQC9 854 aa34.82■■■■□ 3.16
VEGFA-226ENST00000611736 CCNL1Q9UK58 526 aaPredicted RBP34.82■■■■□ 3.16
VEGFA-226ENST00000611736 SMARCC1Q92922 1105 aaPredicted RBP34.8■■■■□ 3.16
VEGFA-226ENST00000611736 RSPH6AQ9H0K4 717 aa34.8■■■■□ 3.16
VEGFA-226ENST00000611736 PRKAR2BP31323 418 aa34.79■■■■□ 3.16
VEGFA-226ENST00000611736 SLC15A2Q16348 729 aa34.79■■■■□ 3.16
VEGFA-226ENST00000611736 CABP4P57796 275 aa34.78■■■■□ 3.16
VEGFA-226ENST00000611736 ASAP1Q9ULH1 1129 aa34.77■■■■□ 3.16
VEGFA-226ENST00000611736 MYBBP1AQ9BQG0 1328 aaKnown RBP34.77■■■■□ 3.16
VEGFA-226ENST00000611736 SCN11AQ9UI33 1791 aa34.77■■■■□ 3.16
VEGFA-226ENST00000611736 ZNF827Q17R98 1081 aa34.75■■■■□ 3.15
VEGFA-226ENST00000611736 GAS2L2Q8NHY3 880 aa34.73■■■■□ 3.15
VEGFA-226ENST00000611736 PHACTR3Q96KR7 559 aa34.73■■■■□ 3.15
VEGFA-226ENST00000611736 LGR6Q9HBX8 967 aa34.73■■■■□ 3.15
VEGFA-226ENST00000611736 ATG3Q9NT62 314 aa34.73■■■■□ 3.15
VEGFA-226ENST00000611736 VIRMAQ69YN4 1812 aaKnown RBP34.73■■■■□ 3.15
VEGFA-226ENST00000611736 FCHSD2O94868 740 aa34.72■■■■□ 3.15
VEGFA-226ENST00000611736 NFATC2IPQ8NCF5 419 aa34.71■■■■□ 3.15
VEGFA-226ENST00000611736 PDGFDQ9GZP0 370 aaPredicted RBP34.71■■■■□ 3.15
VEGFA-226ENST00000611736 PRKRIP1Q9H875 184 aaPredicted RBP34.71■■■■□ 3.15
VEGFA-226ENST00000611736 RNMTO43148 476 aaKnown RBP34.7■■■■□ 3.15
VEGFA-226ENST00000611736 AKT1S1Q96B36 256 aa34.7■■■■□ 3.15
VEGFA-226ENST00000611736 CASZ1Q86V15 1759 aa34.69■■■■□ 3.14
VEGFA-226ENST00000611736 LOC102724428A0A0B4J2F2 783 aa34.68■■■■□ 3.14
VEGFA-226ENST00000611736 C5P01031 1676 aa34.68■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms