RNA–Protein interactions for RNA: ENST00000607316.2

TMEM259-212, Transcript of transmembrane protein 259, humanhuman

TSL 2

Gene TMEM259, Length 477 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-212ENST00000607316 RAPGEF4Q8WZA2 1011 aa18.56■□□□□ 0.56
TMEM259-212ENST00000607316 NHSQ6T4R5 1651 aa18.55■□□□□ 0.56
TMEM259-212ENST00000607316 ZCRB1Q8TBF4 217 aaKnown RBP18.55■□□□□ 0.56
TMEM259-212ENST00000607316 TATP17735 454 aaPredicted RBP18.54■□□□□ 0.56
TMEM259-212ENST00000607316 MTHFSP49914 203 aa18.54■□□□□ 0.56
TMEM259-212ENST00000607316 DOT1LQ8TEK3 1739 aa18.54■□□□□ 0.56
TMEM259-212ENST00000607316 IGSF1Q8N6C5 1336 aa18.53■□□□□ 0.56
TMEM259-212ENST00000607316 PKD1L3Q7Z443 1732 aa18.53■□□□□ 0.56
TMEM259-212ENST00000607316 CAMKK2Q96RR4 588 aa18.53■□□□□ 0.56
TMEM259-212ENST00000607316 ZEB1P37275 1124 aaPredicted RBP18.52■□□□□ 0.56
TMEM259-212ENST00000607316 AEBP1Q8IUX7 1158 aa18.52■□□□□ 0.56
TMEM259-212ENST00000607316 BCL11BQ9C0K0 894 aaPredicted RBP18.52■□□□□ 0.56
TMEM259-212ENST00000607316 RREB1Q92766 1687 aa18.52■□□□□ 0.56
TMEM259-212ENST00000607316 IL13P35225 146 aa18.51■□□□□ 0.55
TMEM259-212ENST00000607316 COL3A1P02461 1466 aaPredicted RBP18.51■□□□□ 0.55
TMEM259-212ENST00000607316 NUP188Q5SRE5 1749 aa18.5■□□□□ 0.55
TMEM259-212ENST00000607316 CYP27B1O15528 508 aa18.49■□□□□ 0.55
TMEM259-212ENST00000607316 DDX10Q13206 875 aaKnown RBP18.49■□□□□ 0.55
TMEM259-212ENST00000607316 BTAF1O14981 1849 aa18.49■□□□□ 0.55
TMEM259-212ENST00000607316 TOGARAM1Q9Y4F4 1720 aa18.49■□□□□ 0.55
TMEM259-212ENST00000607316 PCDH11XQ9BZA7 1347 aa18.48■□□□□ 0.55
TMEM259-212ENST00000607316 PCDH11YQ9BZA8 1340 aa18.48■□□□□ 0.55
TMEM259-212ENST00000607316 RGPD3A6NKT7 1758 aaPredicted RBP18.47■□□□□ 0.55
TMEM259-212ENST00000607316 RGPD4Q7Z3J3 1758 aa18.47■□□□□ 0.55
TMEM259-212ENST00000607316 SULT6B1Q6IMI4 303 aa18.46■□□□□ 0.55
TMEM259-212ENST00000607316 SYTL4Q96C24 671 aaPredicted RBP18.46■□□□□ 0.55
TMEM259-212ENST00000607316 KAT6BQ8WYB5 2073 aa18.45■□□□□ 0.54
TMEM259-212ENST00000607316 PSDA5PKW4 1024 aaPredicted RBP18.45■□□□□ 0.54
TMEM259-212ENST00000607316 PPP2R1AP30153 589 aa18.45■□□□□ 0.54
TMEM259-212ENST00000607316 PRIM1P49642 420 aaKnown RBP18.45■□□□□ 0.54
TMEM259-212ENST00000607316 PROM2Q8N271 834 aa18.45■□□□□ 0.54
TMEM259-212ENST00000607316 PARD3Q8TEW0 1356 aa18.44■□□□□ 0.54
TMEM259-212ENST00000607316 HMOX1P09601 288 aa18.44■□□□□ 0.54
TMEM259-212ENST00000607316 KDRP35968 1356 aa18.43■□□□□ 0.54
TMEM259-212ENST00000607316 SRCAPQ6ZRS2 3230 aa18.43■□□□□ 0.54
TMEM259-212ENST00000607316 PLSCR1O15162 318 aa18.43■□□□□ 0.54
TMEM259-212ENST00000607316 DIAPH1O60610 1272 aaKnown RBP18.43■□□□□ 0.54
TMEM259-212ENST00000607316 SPG7Q9UQ90 795 aa18.43■□□□□ 0.54
TMEM259-212ENST00000607316 R3HDM1Q15032 1099 aaKnown RBP18.41■□□□□ 0.54
TMEM259-212ENST00000607316 TXNRD1Q16881 649 aa18.41■□□□□ 0.54
TMEM259-212ENST00000607316 PHKG2P15735 406 aa18.4■□□□□ 0.54
TMEM259-212ENST00000607316 ANO8Q9HCE9 1232 aaPredicted RBP18.4■□□□□ 0.54
TMEM259-212ENST00000607316 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.4■□□□□ 0.54
TMEM259-212ENST00000607316 ITGB4P16144 1822 aa18.39■□□□□ 0.54
TMEM259-212ENST00000607316 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.53
TMEM259-212ENST00000607316 NKX1-1Q15270 411 aaPredicted RBP18.38■□□□□ 0.53
TMEM259-212ENST00000607316 IFNL2Q8IZJ0 200 aa18.38■□□□□ 0.53
TMEM259-212ENST00000607316 KCNQ4P56696 695 aa18.37■□□□□ 0.53
TMEM259-212ENST00000607316 PLEKHO1Q53GL0 409 aaPredicted RBP18.37■□□□□ 0.53
TMEM259-212ENST00000607316 ZNF530Q6P9A1 599 aaPredicted RBP18.37■□□□□ 0.53
TMEM259-212ENST00000607316 MPRIPQ6WCQ1 1025 aa18.37■□□□□ 0.53
TMEM259-212ENST00000607316 KDM6AO15550 1401 aaPredicted RBP18.36■□□□□ 0.53
TMEM259-212ENST00000607316 PAPPAQ13219 1627 aa18.36■□□□□ 0.53
TMEM259-212ENST00000607316 PLEKHG2Q9H7P9 1386 aa18.36■□□□□ 0.53
TMEM259-212ENST00000607316 LRRC4BQ9NT99 713 aa18.36■□□□□ 0.53
TMEM259-212ENST00000607316 LY75O60449 1722 aa18.35■□□□□ 0.53
TMEM259-212ENST00000607316 CFAP53Q96M91 514 aa18.35■□□□□ 0.53
TMEM259-212ENST00000607316 AMOTQ4VCS5 1084 aa18.33■□□□□ 0.52
TMEM259-212ENST00000607316 PIGBQ92521 554 aa18.33■□□□□ 0.52
TMEM259-212ENST00000607316 MTHFSDQ2M296 383 aaKnown RBP18.32■□□□□ 0.52
TMEM259-212ENST00000607316 NBPF14Q5TI25 921 aa18.32■□□□□ 0.52
TMEM259-212ENST00000607316 ZNF827Q17R98 1081 aa18.31■□□□□ 0.52
TMEM259-212ENST00000607316 PDGFDQ9GZP0 370 aaPredicted RBP18.31■□□□□ 0.52
TMEM259-212ENST00000607316 PALLDQ8WX93 1383 aa18.3■□□□□ 0.52
TMEM259-212ENST00000607316 C1orf141Q5JVX7 400 aa18.3■□□□□ 0.52
TMEM259-212ENST00000607316 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
TMEM259-212ENST00000607316 ZNF316A6NFI3 1004 aaPredicted RBP18.29■□□□□ 0.52
TMEM259-212ENST00000607316 U2AF1L5P0DN76 240 aaPredicted RBP18.29■□□□□ 0.52
TMEM259-212ENST00000607316 PRKAR2BP31323 418 aa18.29■□□□□ 0.52
TMEM259-212ENST00000607316 U2AF1Q01081 240 aaKnown RBP eCLIP18.29■□□□□ 0.52
TMEM259-212ENST00000607316 RALBP1Q15311 655 aa18.29■□□□□ 0.52
TMEM259-212ENST00000607316 DCAF5Q96JK2 942 aa18.29■□□□□ 0.52
TMEM259-212ENST00000607316 TMOD3Q9NYL9 352 aa18.29■□□□□ 0.52
TMEM259-212ENST00000607316 SCN11AQ9UI33 1791 aa18.28■□□□□ 0.52
TMEM259-212ENST00000607316 PHACTR3Q96KR7 559 aa18.28■□□□□ 0.52
TMEM259-212ENST00000607316 CCNL1Q9UK58 526 aaPredicted RBP18.28■□□□□ 0.52
TMEM259-212ENST00000607316 ASAP1Q9ULH1 1129 aa18.28■□□□□ 0.52
TMEM259-212ENST00000607316 CASZ1Q86V15 1759 aa18.27■□□□□ 0.52
TMEM259-212ENST00000607316 SLC15A2Q16348 729 aa18.27■□□□□ 0.52
TMEM259-212ENST00000607316 AKAP4Q5JQC9 854 aa18.27■□□□□ 0.52
TMEM259-212ENST00000607316 LGR6Q9HBX8 967 aa18.27■□□□□ 0.52
TMEM259-212ENST00000607316 STK32BQ9NY57 414 aa18.27■□□□□ 0.52
TMEM259-212ENST00000607316 NUDCQ9Y266 331 aa18.27■□□□□ 0.52
TMEM259-212ENST00000607316 VIRMAQ69YN4 1812 aaKnown RBP18.27■□□□□ 0.52
TMEM259-212ENST00000607316 TUBGCP6Q96RT7 1819 aa18.26■□□□□ 0.51
TMEM259-212ENST00000607316 HSP90AB1P08238 724 aaKnown RBP18.26■□□□□ 0.51
TMEM259-212ENST00000607316 SLC27A3Q5K4L6 730 aa18.26■□□□□ 0.51
TMEM259-212ENST00000607316 ATG3Q9NT62 314 aa18.26■□□□□ 0.51
TMEM259-212ENST00000607316 C5P01031 1676 aa18.25■□□□□ 0.51
TMEM259-212ENST00000607316 ERVV-2B6SEH9 535 aa18.25■□□□□ 0.51
TMEM259-212ENST00000607316 ADAMTS7Q9UKP4 1686 aa18.25■□□□□ 0.51
TMEM259-212ENST00000607316 MYBBP1AQ9BQG0 1328 aaKnown RBP18.24■□□□□ 0.51
TMEM259-212ENST00000607316 TAF1LQ8IZX4 1826 aa18.24■□□□□ 0.51
TMEM259-212ENST00000607316 CABP4P57796 275 aa18.24■□□□□ 0.51
TMEM259-212ENST00000607316 AKT1S1Q96B36 256 aa18.24■□□□□ 0.51
TMEM259-212ENST00000607316 PRKRIP1Q9H875 184 aaPredicted RBP18.24■□□□□ 0.51
TMEM259-212ENST00000607316 LRP5O75197 1615 aa18.23■□□□□ 0.51
TMEM259-212ENST00000607316 MRC1P22897 1456 aa18.23■□□□□ 0.51
TMEM259-212ENST00000607316 NFATC2IPQ8NCF5 419 aa18.23■□□□□ 0.51
TMEM259-212ENST00000607316 RNMTO43148 476 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms