RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 CDV3Q9UKY7 258 aaKnown RBP6.83□□□□□ -1.32
AC004542.1-201ENST00000602955 M0R2N6 131 aa6.82□□□□□ -1.32
AC004542.1-201ENST00000602955 ICMTO60725 284 aa6.82□□□□□ -1.32
AC004542.1-201ENST00000602955 ZNF16P17020 682 aaPredicted RBP6.82□□□□□ -1.32
AC004542.1-201ENST00000602955 LINC01559Q495D7 138 aa6.82□□□□□ -1.32
AC004542.1-201ENST00000602955 IGSF5Q9NSI5 407 aa6.82□□□□□ -1.32
AC004542.1-201ENST00000602955 PCDHB11Q9Y5F2 797 aa6.82□□□□□ -1.32
AC004542.1-201ENST00000602955 WEE1P30291 646 aa6.81□□□□□ -1.32
AC004542.1-201ENST00000602955 ZNF516Q92618 1163 aa6.81□□□□□ -1.32
AC004542.1-201ENST00000602955 KCTD12Q96CX2 325 aaKnown RBP6.81□□□□□ -1.32
AC004542.1-201ENST00000602955 ANKRD33BA6NCL7 494 aa6.8□□□□□ -1.32
AC004542.1-201ENST00000602955 ABL1P00519 1130 aa6.8□□□□□ -1.32
AC004542.1-201ENST00000602955 NPAS4Q8IUM7 802 aa6.8□□□□□ -1.32
AC004542.1-201ENST00000602955 BCL2L13Q9BXK5 485 aa6.8□□□□□ -1.32
AC004542.1-201ENST00000602955 KIAA1522Q9P206 1035 aaPredicted RBP6.8□□□□□ -1.32
AC004542.1-201ENST00000602955 FCF1Q9Y324 198 aaKnown RBP6.8□□□□□ -1.32
AC004542.1-201ENST00000602955 H3BRB1 525 aa6.79□□□□□ -1.32
AC004542.1-201ENST00000602955 IGSF3O75054 1194 aa6.79□□□□□ -1.32
AC004542.1-201ENST00000602955 S1PR4O95977 384 aa6.79□□□□□ -1.32
AC004542.1-201ENST00000602955 SH3BP2P78314 561 aa6.79□□□□□ -1.32
AC004542.1-201ENST00000602955 HINFPQ9BQA5 517 aa6.79□□□□□ -1.32
AC004542.1-201ENST00000602955 TUT1Q9H6E5 874 aaKnown RBP6.79□□□□□ -1.32
AC004542.1-201ENST00000602955 C21orf2O43822 256 aa6.78□□□□□ -1.32
AC004542.1-201ENST00000602955 PTCD1O75127 700 aaKnown RBP6.78□□□□□ -1.32
AC004542.1-201ENST00000602955 MYCP01106 439 aaPredicted RBP6.78□□□□□ -1.32
AC004542.1-201ENST00000602955 ZNF211Q13398 564 aaPredicted RBP6.78□□□□□ -1.32
AC004542.1-201ENST00000602955 SF3B2Q13435 895 aaKnown RBP6.78□□□□□ -1.32
AC004542.1-201ENST00000602955 GLYCTKQ8IVS8 523 aa6.78□□□□□ -1.32
AC004542.1-201ENST00000602955 TSEN2Q8NCE0 465 aaKnown RBP6.78□□□□□ -1.32
AC004542.1-201ENST00000602955 GTF3C2Q8WUA4 911 aaPredicted RBP6.78□□□□□ -1.32
AC004542.1-201ENST00000602955 MRRFQ96E11 262 aaKnown RBP6.78□□□□□ -1.32
AC004542.1-201ENST00000602955 POTEMA6NI47 508 aa6.77□□□□□ -1.33
AC004542.1-201ENST00000602955 FKBP5Q13451 457 aaPredicted RBP6.77□□□□□ -1.33
AC004542.1-201ENST00000602955 ECM1Q16610 540 aa6.77□□□□□ -1.33
AC004542.1-201ENST00000602955 GIPC2Q8TF65 315 aa6.77□□□□□ -1.33
AC004542.1-201ENST00000602955 COL26A1Q96A83 441 aa6.77□□□□□ -1.33
AC004542.1-201ENST00000602955 KCTD15Q96SI1 283 aaPredicted RBP6.77□□□□□ -1.33
AC004542.1-201ENST00000602955 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
AC004542.1-201ENST00000602955 KRTAP3-2Q9BYR7 98 aa6.77□□□□□ -1.33
AC004542.1-201ENST00000602955 SEPT3Q9UH03 358 aa6.77□□□□□ -1.33
AC004542.1-201ENST00000602955 MAP4K5Q9Y4K4 846 aa6.77□□□□□ -1.33
AC004542.1-201ENST00000602955 FKBP4Q02790 459 aaKnown RBP eCLIP6.76□□□□□ -1.33
AC004542.1-201ENST00000602955 NKX2-3Q8TAU0 364 aa6.76□□□□□ -1.33
AC004542.1-201ENST00000602955 ANO2Q9NQ90 1003 aa6.76□□□□□ -1.33
AC004542.1-201ENST00000602955 ZNF358Q9NW07 568 aa6.76□□□□□ -1.33
AC004542.1-201ENST00000602955 DCTN4Q9UJW0 460 aa6.76□□□□□ -1.33
AC004542.1-201ENST00000602955 DNMT3AQ9Y6K1 912 aaPredicted RBP6.76□□□□□ -1.33
AC004542.1-201ENST00000602955 LGR5O75473 907 aa6.75□□□□□ -1.33
AC004542.1-201ENST00000602955 IGFBP4P22692 258 aa6.75□□□□□ -1.33
AC004542.1-201ENST00000602955 ARHGAP4P98171 946 aa6.75□□□□□ -1.33
AC004542.1-201ENST00000602955 ZNF326Q5BKZ1 582 aaKnown RBP6.75□□□□□ -1.33
AC004542.1-201ENST00000602955 INTS6LQ5JSJ4 861 aaKnown RBP6.75□□□□□ -1.33
AC004542.1-201ENST00000602955 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.75□□□□□ -1.33
AC004542.1-201ENST00000602955 ASB16Q96NS5 453 aa6.75□□□□□ -1.33
AC004542.1-201ENST00000602955 PURBQ96QR8 312 aaKnown RBP6.75□□□□□ -1.33
AC004542.1-201ENST00000602955 WASLO00401 505 aaPredicted RBP6.74□□□□□ -1.33
AC004542.1-201ENST00000602955 VAMP1P23763 118 aa6.74□□□□□ -1.33
AC004542.1-201ENST00000602955 VARSP26640 1264 aaKnown RBP6.74□□□□□ -1.33
AC004542.1-201ENST00000602955 SCTRP47872 440 aa6.74□□□□□ -1.33
AC004542.1-201ENST00000602955 ERVK-9P63128 1117 aa6.74□□□□□ -1.33
AC004542.1-201ENST00000602955 COL19A1Q14993 1142 aa6.74□□□□□ -1.33
AC004542.1-201ENST00000602955 CAPN12Q6ZSI9 719 aa6.74□□□□□ -1.33
AC004542.1-201ENST00000602955 FBXO33Q7Z6M2 555 aa6.74□□□□□ -1.33
AC004542.1-201ENST00000602955 MKNK1Q9BUB5 465 aa6.74□□□□□ -1.33
AC004542.1-201ENST00000602955 TMEM229AB2RXF0 380 aa6.73□□□□□ -1.33
AC004542.1-201ENST00000602955 ERVH48-1M5A8F1 160 aa6.73□□□□□ -1.33
AC004542.1-201ENST00000602955 FOXO3O43524 673 aa6.73□□□□□ -1.33
AC004542.1-201ENST00000602955 MAPK1P28482 360 aa6.73□□□□□ -1.33
AC004542.1-201ENST00000602955 WNT7BP56706 349 aa6.73□□□□□ -1.33
AC004542.1-201ENST00000602955 RAB15P59190 212 aa6.73□□□□□ -1.33
AC004542.1-201ENST00000602955 ZSCAN29Q8IWY8 852 aaPredicted RBP6.73□□□□□ -1.33
AC004542.1-201ENST00000602955 HELQQ8TDG4 1101 aa6.73□□□□□ -1.33
AC004542.1-201ENST00000602955 TRIM52Q96A61 297 aa6.73□□□□□ -1.33
AC004542.1-201ENST00000602955 LOC105371045A0A1W2PR82 267 aa6.72□□□□□ -1.33
AC004542.1-201ENST00000602955 NPR3P17342 541 aa6.72□□□□□ -1.33
AC004542.1-201ENST00000602955 SCNN1DP51172 638 aa6.72□□□□□ -1.33
AC004542.1-201ENST00000602955 PTPN5P54829 565 aa6.72□□□□□ -1.33
AC004542.1-201ENST00000602955 TRIM32Q13049 653 aa6.72□□□□□ -1.33
AC004542.1-201ENST00000602955 MTMR3Q13615 1198 aa6.72□□□□□ -1.33
AC004542.1-201ENST00000602955 CC2D2BQ6DHV5 1058 aa6.72□□□□□ -1.33
AC004542.1-201ENST00000602955 VASH1Q7L8A9 365 aaPredicted RBP6.72□□□□□ -1.33
AC004542.1-201ENST00000602955 ESF1Q9H501 851 aaKnown RBP6.72□□□□□ -1.33
AC004542.1-201ENST00000602955 BACH1O14867 736 aa6.71□□□□□ -1.34
AC004542.1-201ENST00000602955 ZBTB24O43167 697 aaPredicted RBP6.71□□□□□ -1.34
AC004542.1-201ENST00000602955 EPHA4P54764 986 aa6.71□□□□□ -1.34
AC004542.1-201ENST00000602955 SKOR1P84550 965 aa6.71□□□□□ -1.34
AC004542.1-201ENST00000602955 RGL4Q8IZJ4 473 aa6.71□□□□□ -1.34
AC004542.1-201ENST00000602955 GAS2L2Q8NHY3 880 aa6.71□□□□□ -1.34
AC004542.1-201ENST00000602955 OSBPL3Q9H4L5 887 aa6.71□□□□□ -1.34
AC004542.1-201ENST00000602955 FAM13AO94988 1023 aa6.7□□□□□ -1.34
AC004542.1-201ENST00000602955 TCF3P15923 654 aa6.7□□□□□ -1.34
AC004542.1-201ENST00000602955 GDF10P55107 478 aa6.7□□□□□ -1.34
AC004542.1-201ENST00000602955 SCG3Q8WXD2 468 aaKnown RBP6.7□□□□□ -1.34
AC004542.1-201ENST00000602955 CDK15Q96Q40 435 aa6.7□□□□□ -1.34
AC004542.1-201ENST00000602955 PPEF1O14829 653 aaPredicted RBP6.69□□□□□ -1.34
AC004542.1-201ENST00000602955 DHX9Q08211 1270 aaKnown RBP6.69□□□□□ -1.34
AC004542.1-201ENST00000602955 NAA30Q147X3 362 aaPredicted RBP6.69□□□□□ -1.34
AC004542.1-201ENST00000602955 TNS4Q8IZW8 715 aa6.69□□□□□ -1.34
AC004542.1-201ENST00000602955 ANKLE1Q8NAG6 615 aa6.69□□□□□ -1.34
AC004542.1-201ENST00000602955 SLC4A9Q96Q91 983 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms