RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 VPS72Q15906 364 aa25.1■■□□□ 1.61
UBE2E3-209ENST00000602710 IL2RBP14784 551 aa25.1■■□□□ 1.61
UBE2E3-209ENST00000602710 PLEKHO1Q53GL0 409 aaPredicted RBP25.09■■□□□ 1.61
UBE2E3-209ENST00000602710 TRIM35Q9UPQ4 493 aa25.09■■□□□ 1.61
UBE2E3-209ENST00000602710 GAS2L2Q8NHY3 880 aa25.08■■□□□ 1.61
UBE2E3-209ENST00000602710 AMOTQ4VCS5 1084 aa25.07■■□□□ 1.6
UBE2E3-209ENST00000602710 NGEFQ8N5V2 710 aa25.07■■□□□ 1.6
UBE2E3-209ENST00000602710 PARP4Q9UKK3 1724 aaKnown RBP25.06■■□□□ 1.6
UBE2E3-209ENST00000602710 WWC1Q8IX03 1113 aa25.06■■□□□ 1.6
UBE2E3-209ENST00000602710 PHF23Q9BUL5 403 aaPredicted RBP25.06■■□□□ 1.6
UBE2E3-209ENST00000602710 OVOS2A0A0G2JMS6 1433 aa25.06■■□□□ 1.6
UBE2E3-209ENST00000602710 DISP2A7MBM2 1401 aa25.05■■□□□ 1.6
UBE2E3-209ENST00000602710 ZNF521Q96K83 1311 aa25.05■■□□□ 1.6
UBE2E3-209ENST00000602710 CCDC27Q2M243 656 aa25.05■■□□□ 1.6
UBE2E3-209ENST00000602710 NCBP3Q53F19 620 aaKnown RBP25.05■■□□□ 1.6
UBE2E3-209ENST00000602710 ZNF530Q6P9A1 599 aaPredicted RBP25.05■■□□□ 1.6
UBE2E3-209ENST00000602710 THRAP3Q9Y2W1 955 aaKnown RBP25.05■■□□□ 1.6
UBE2E3-209ENST00000602710 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.04■■□□□ 1.6
UBE2E3-209ENST00000602710 WNK3Q9BYP7 1800 aa25.04■■□□□ 1.6
UBE2E3-209ENST00000602710 PKD1L3Q7Z443 1732 aa25.03■■□□□ 1.6
UBE2E3-209ENST00000602710 SPG7Q9UQ90 795 aa25.03■■□□□ 1.6
UBE2E3-209ENST00000602710 DCTN1Q14203 1278 aa25.02■■□□□ 1.6
UBE2E3-209ENST00000602710 ZCRB1Q8TBF4 217 aaKnown RBP25.02■■□□□ 1.6
UBE2E3-209ENST00000602710 ATRNO75882 1429 aa25.02■■□□□ 1.6
UBE2E3-209ENST00000602710 THUMPD2Q9BTF0 503 aaKnown RBP25.01■■□□□ 1.59
UBE2E3-209ENST00000602710 TRPC5Q9UL62 973 aaPredicted RBP25.01■■□□□ 1.59
UBE2E3-209ENST00000602710 PLEKHG2Q9H7P9 1386 aa25.01■■□□□ 1.59
UBE2E3-209ENST00000602710 GNAT3A8MTJ3 354 aa25.01■■□□□ 1.59
UBE2E3-209ENST00000602710 BARGINQ6ZT62 677 aa25.01■■□□□ 1.59
UBE2E3-209ENST00000602710 QTRT2Q9H974 415 aaKnown RBP25.01■■□□□ 1.59
UBE2E3-209ENST00000602710 FAM98CQ17RN3 349 aaKnown RBP25■■□□□ 1.59
UBE2E3-209ENST00000602710 GJD4Q96KN9 370 aaPredicted RBP25■■□□□ 1.59
UBE2E3-209ENST00000602710 MAP3K5Q99683 1374 aa25■■□□□ 1.59
UBE2E3-209ENST00000602710 CYP27B1O15528 508 aa24.99■■□□□ 1.59
UBE2E3-209ENST00000602710 LMOD3Q0VAK6 560 aa24.99■■□□□ 1.59
UBE2E3-209ENST00000602710 AKAP4Q5JQC9 854 aa24.99■■□□□ 1.59
UBE2E3-209ENST00000602710 C1orf141Q5JVX7 400 aa24.99■■□□□ 1.59
UBE2E3-209ENST00000602710 MCM10Q7L590 875 aa24.99■■□□□ 1.59
UBE2E3-209ENST00000602710 CDCA7LQ96GN5 454 aa24.99■■□□□ 1.59
UBE2E3-209ENST00000602710 GLI3P10071 1580 aa24.98■■□□□ 1.59
UBE2E3-209ENST00000602710 SHANK3Q9BYB0 1731 aa24.98■■□□□ 1.59
UBE2E3-209ENST00000602710 RTF1Q92541 710 aaKnown RBP24.97■■□□□ 1.59
UBE2E3-209ENST00000602710 CDCA7Q9BWT1 371 aaPredicted RBP24.97■■□□□ 1.59
UBE2E3-209ENST00000602710 PHKG2P15735 406 aa24.97■■□□□ 1.59
UBE2E3-209ENST00000602710 WDR63Q8IWG1 891 aa24.97■■□□□ 1.59
UBE2E3-209ENST00000602710 SPINK5Q9NQ38 1064 aaPredicted RBP24.97■■□□□ 1.59
UBE2E3-209ENST00000602710 HTATSF1O43719 755 aaKnown RBP24.96■■□□□ 1.59
UBE2E3-209ENST00000602710 GOLGA2Q08379 1002 aa24.96■■□□□ 1.59
UBE2E3-209ENST00000602710 MPRIPQ6WCQ1 1025 aa24.96■■□□□ 1.59
UBE2E3-209ENST00000602710 IFNL2Q8IZJ0 200 aa24.96■■□□□ 1.59
UBE2E3-209ENST00000602710 IL17REQ8NFR9 667 aa24.96■■□□□ 1.59
UBE2E3-209ENST00000602710 DDX54Q8TDD1 881 aaKnown RBP24.96■■□□□ 1.59
UBE2E3-209ENST00000602710 PCDH11XQ9BZA7 1347 aa24.95■■□□□ 1.58
UBE2E3-209ENST00000602710 PCDH11YQ9BZA8 1340 aa24.95■■□□□ 1.58
UBE2E3-209ENST00000602710 EXOC5O00471 708 aa24.95■■□□□ 1.58
UBE2E3-209ENST00000602710 ZNF772Q68DY9 489 aaPredicted RBP24.95■■□□□ 1.58
UBE2E3-209ENST00000602710 LGR6Q9HBX8 967 aa24.95■■□□□ 1.58
UBE2E3-209ENST00000602710 PDE3BQ13370 1112 aa24.93■■□□□ 1.58
UBE2E3-209ENST00000602710 VIRMAQ69YN4 1812 aaKnown RBP24.92■■□□□ 1.58
UBE2E3-209ENST00000602710 LRRC37A3O60309 1634 aa24.92■■□□□ 1.58
UBE2E3-209ENST00000602710 DDB1Q16531 1140 aa24.92■■□□□ 1.58
UBE2E3-209ENST00000602710 TNS2Q63HR2 1409 aa24.92■■□□□ 1.58
UBE2E3-209ENST00000602710 RNMTO43148 476 aaKnown RBP24.91■■□□□ 1.58
UBE2E3-209ENST00000602710 SLFN5Q08AF3 891 aa24.91■■□□□ 1.58
UBE2E3-209ENST00000602710 RGS17Q9UGC6 210 aaPredicted RBP24.91■■□□□ 1.58
UBE2E3-209ENST00000602710 A0A0G2JS52 829 aa24.9■■□□□ 1.58
UBE2E3-209ENST00000602710 MYT1Q01538 1121 aa24.9■■□□□ 1.58
UBE2E3-209ENST00000602710 THSD7AQ9UPZ6 1657 aa24.89■■□□□ 1.58
UBE2E3-209ENST00000602710 KDM6AO15550 1401 aaPredicted RBP24.89■■□□□ 1.58
UBE2E3-209ENST00000602710 LAS1LQ9Y4W2 734 aaKnown RBP24.89■■□□□ 1.58
UBE2E3-209ENST00000602710 CEMIPQ8WUJ3 1361 aa24.89■■□□□ 1.58
UBE2E3-209ENST00000602710 IL16Q14005 1332 aa24.88■■□□□ 1.57
UBE2E3-209ENST00000602710 E9PSI1 815 aa24.88■■□□□ 1.57
UBE2E3-209ENST00000602710 ONECUT3O60422 494 aaPredicted RBP24.88■■□□□ 1.57
UBE2E3-209ENST00000602710 CALD1Q05682 793 aaKnown RBP24.88■■□□□ 1.57
UBE2E3-209ENST00000602710 ADAMTS7Q9UKP4 1686 aa24.88■■□□□ 1.57
UBE2E3-209ENST00000602710 SCN11AQ9UI33 1791 aa24.88■■□□□ 1.57
UBE2E3-209ENST00000602710 HSP90AB1P08238 724 aaKnown RBP24.87■■□□□ 1.57
UBE2E3-209ENST00000602710 NKX1-1Q15270 411 aaPredicted RBP24.87■■□□□ 1.57
UBE2E3-209ENST00000602710 TRMT2AQ8IZ69 625 aaKnown RBP24.87■■□□□ 1.57
UBE2E3-209ENST00000602710 DCAF5Q96JK2 942 aa24.87■■□□□ 1.57
UBE2E3-209ENST00000602710 DUSP27Q5VZP5 1158 aa24.85■■□□□ 1.57
UBE2E3-209ENST00000602710 MARCH10Q8NA82 808 aaPredicted RBP24.85■■□□□ 1.57
UBE2E3-209ENST00000602710 ZNF853P0CG23 659 aa24.84■■□□□ 1.57
UBE2E3-209ENST00000602710 RBM6P78332 1123 aaKnown RBP24.84■■□□□ 1.57
UBE2E3-209ENST00000602710 SEPT12Q8IYM1 358 aa24.84■■□□□ 1.57
UBE2E3-209ENST00000602710 TSR2Q969E8 191 aaKnown RBP24.84■■□□□ 1.57
UBE2E3-209ENST00000602710 IFT57Q9NWB7 429 aa24.84■■□□□ 1.57
UBE2E3-209ENST00000602710 CENPBP07199 599 aaPredicted RBP24.84■■□□□ 1.57
UBE2E3-209ENST00000602710 CFAP44Q96MT7 982 aa24.84■■□□□ 1.57
UBE2E3-209ENST00000602710 MIS18AQ9NYP9 233 aa24.84■■□□□ 1.57
UBE2E3-209ENST00000602710 GNAI1P63096 354 aa24.83■■□□□ 1.57
UBE2E3-209ENST00000602710 TEFQ10587 303 aa24.83■■□□□ 1.57
UBE2E3-209ENST00000602710 POTEAQ6S8J7 498 aa24.83■■□□□ 1.57
UBE2E3-209ENST00000602710 TAF7Q15545 349 aaPredicted RBP24.82■■□□□ 1.56
UBE2E3-209ENST00000602710 MYH16Q9H6N6 1097 aa24.82■■□□□ 1.56
UBE2E3-209ENST00000602710 CHL1O00533 1208 aa24.81■■□□□ 1.56
UBE2E3-209ENST00000602710 MBIPQ9NS73 344 aa24.81■■□□□ 1.56
UBE2E3-209ENST00000602710 FANCIQ9NVI1 1328 aa24.81■■□□□ 1.56
UBE2E3-209ENST00000602710 TOGARAM1Q9Y4F4 1720 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms