RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 PANK3Q9H999 370 aa14.27□□□□□ -0.12
SHANK2-218ENST00000601538 CYP46A1Q9Y6A2 500 aa14.27□□□□□ -0.12
SHANK2-218ENST00000601538 RRP7AQ9Y3A4 280 aaKnown RBP14.27□□□□□ -0.12
SHANK2-218ENST00000601538 FAM177A1Q8N128 213 aaPredicted RBP14.27□□□□□ -0.13
SHANK2-218ENST00000601538 DDX23Q9BUQ8 820 aaKnown RBP14.27□□□□□ -0.13
SHANK2-218ENST00000601538 AK9Q5TCS8 1911 aa14.27□□□□□ -0.13
SHANK2-218ENST00000601538 A0A1B0GUA9 196 aa14.27□□□□□ -0.13
SHANK2-218ENST00000601538 CARMIL1Q5VZK9 1371 aa14.27□□□□□ -0.13
SHANK2-218ENST00000601538 RNF187Q5TA31 235 aaPredicted RBP14.26□□□□□ -0.13
SHANK2-218ENST00000601538 SMARCC1Q92922 1105 aaPredicted RBP14.26□□□□□ -0.13
SHANK2-218ENST00000601538 CCDC9Q9Y3X0 531 aaKnown RBP14.26□□□□□ -0.13
SHANK2-218ENST00000601538 FKBP5Q13451 457 aaPredicted RBP14.26□□□□□ -0.13
SHANK2-218ENST00000601538 NUTM1Q86Y26 1132 aa14.26□□□□□ -0.13
SHANK2-218ENST00000601538 BMP2KQ9NSY1 1161 aaPredicted RBP14.26□□□□□ -0.13
SHANK2-218ENST00000601538 L3MBTL2Q969R5 705 aa14.26□□□□□ -0.13
SHANK2-218ENST00000601538 SRCIN1Q9C0H9 1055 aa14.26□□□□□ -0.13
SHANK2-218ENST00000601538 MAPK8IP2Q13387 824 aaPredicted RBP14.26□□□□□ -0.13
SHANK2-218ENST00000601538 CBX1P83916 185 aa14.26□□□□□ -0.13
SHANK2-218ENST00000601538 CCDC50Q8IVM0 306 aa14.26□□□□□ -0.13
SHANK2-218ENST00000601538 TMCO5BA8MYB1 307 aa14.25□□□□□ -0.13
SHANK2-218ENST00000601538 EID1Q9Y6B2 187 aa14.25□□□□□ -0.13
SHANK2-218ENST00000601538 FOSBP53539 338 aa14.25□□□□□ -0.13
SHANK2-218ENST00000601538 NOL7Q9UMY1 257 aaKnown RBP14.25□□□□□ -0.13
SHANK2-218ENST00000601538 CEP131Q9UPN4 1083 aa14.25□□□□□ -0.13
SHANK2-218ENST00000601538 GNAI3P08754 354 aa14.25□□□□□ -0.13
SHANK2-218ENST00000601538 ZNF428Q96B54 188 aa14.25□□□□□ -0.13
SHANK2-218ENST00000601538 SPATA32Q96LK8 384 aa14.25□□□□□ -0.13
SHANK2-218ENST00000601538 NSRP1Q9H0G5 558 aaKnown RBP14.25□□□□□ -0.13
SHANK2-218ENST00000601538 FGFR1OPO95684 399 aaKnown RBP14.25□□□□□ -0.13
SHANK2-218ENST00000601538 EHBP1Q8NDI1 1231 aa14.24□□□□□ -0.13
SHANK2-218ENST00000601538 UBTFL1P0CB47 393 aaPredicted RBP14.24□□□□□ -0.13
SHANK2-218ENST00000601538 CTAGE5O15320 804 aa14.24□□□□□ -0.13
SHANK2-218ENST00000601538 HOOK3Q86VS8 718 aa14.24□□□□□ -0.13
SHANK2-218ENST00000601538 A0A1B0GUL7 405 aa14.24□□□□□ -0.13
SHANK2-218ENST00000601538 ANAPC15P60006 121 aa14.24□□□□□ -0.13
SHANK2-218ENST00000601538 SREK1Q8WXA9 508 aaKnown RBP14.24□□□□□ -0.13
SHANK2-218ENST00000601538 TANGO6Q9C0B7 1094 aa14.24□□□□□ -0.13
SHANK2-218ENST00000601538 ZKSCAN5Q9Y2L8 839 aa14.24□□□□□ -0.13
SHANK2-218ENST00000601538 PAFAH1B1P43034 410 aa14.24□□□□□ -0.13
SHANK2-218ENST00000601538 TMEM132AQ24JP5 1023 aa14.24□□□□□ -0.13
SHANK2-218ENST00000601538 ZSCAN31Q96LW9 406 aaPredicted RBP14.24□□□□□ -0.13
SHANK2-218ENST00000601538 HMGB1P1B2RPK0 211 aaPredicted RBP14.23□□□□□ -0.13
SHANK2-218ENST00000601538 TTC31Q49AM3 519 aaPredicted RBP14.23□□□□□ -0.13
SHANK2-218ENST00000601538 WASF1Q92558 559 aa14.23□□□□□ -0.13
SHANK2-218ENST00000601538 KIF21AQ7Z4S6 1674 aa14.23□□□□□ -0.13
SHANK2-218ENST00000601538 MIPOL1Q8TD10 442 aa14.23□□□□□ -0.13
SHANK2-218ENST00000601538 CCDC183Q5T5S1 534 aa14.23□□□□□ -0.13
SHANK2-218ENST00000601538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.23□□□□□ -0.137e-7■■■□□ 16.9
SHANK2-218ENST00000601538 PPP6R1Q9UPN7 881 aa14.23□□□□□ -0.13
SHANK2-218ENST00000601538 FSD1Q9BTV5 496 aa14.23□□□□□ -0.13
SHANK2-218ENST00000601538 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.23□□□□□ -0.13
SHANK2-218ENST00000601538 EHBP1L1Q8N3D4 1523 aa14.23□□□□□ -0.13
SHANK2-218ENST00000601538 WASHC4Q2M389 1173 aa14.23□□□□□ -0.13
SHANK2-218ENST00000601538 CEP112Q8N8E3 955 aa14.23□□□□□ -0.13
SHANK2-218ENST00000601538 RAPGEF2Q9Y4G8 1499 aa14.23□□□□□ -0.13
SHANK2-218ENST00000601538 EIF5P55010 431 aaKnown RBP14.23□□□□□ -0.13
SHANK2-218ENST00000601538 GRIPAP1Q4V328 841 aa14.23□□□□□ -0.13
SHANK2-218ENST00000601538 ALS2CR12Q96Q35 445 aa14.22□□□□□ -0.13
SHANK2-218ENST00000601538 NKTRP30414 1462 aaKnown RBP14.22□□□□□ -0.13
SHANK2-218ENST00000601538 LRRC9Q6ZRR7 1453 aa14.22□□□□□ -0.13
SHANK2-218ENST00000601538 CCDC57Q2TAC2 916 aa14.22□□□□□ -0.13
SHANK2-218ENST00000601538 CFAP100Q494V2 611 aa14.22□□□□□ -0.13
SHANK2-218ENST00000601538 USO1O60763 962 aaKnown RBP14.22□□□□□ -0.13
SHANK2-218ENST00000601538 KIF3CO14782 793 aa14.22□□□□□ -0.13
SHANK2-218ENST00000601538 RIPK4P57078 832 aa14.22□□□□□ -0.13
SHANK2-218ENST00000601538 KRT32Q14532 448 aa14.22□□□□□ -0.13
SHANK2-218ENST00000601538 DIAPH1O60610 1272 aaKnown RBP14.21□□□□□ -0.13
SHANK2-218ENST00000601538 FOXD1Q16676 465 aa14.21□□□□□ -0.13
SHANK2-218ENST00000601538 HFM1A2PYH4 1435 aa14.21□□□□□ -0.13
SHANK2-218ENST00000601538 CUX2O14529 1486 aa14.21□□□□□ -0.13
SHANK2-218ENST00000601538 TRHP20396 242 aaPredicted RBP14.21□□□□□ -0.13
SHANK2-218ENST00000601538 LARP1BQ659C4 914 aaKnown RBP14.21□□□□□ -0.13
SHANK2-218ENST00000601538 CCDC113Q9H0I3 377 aa14.21□□□□□ -0.13
SHANK2-218ENST00000601538 MKRN1Q9UHC7 482 aaKnown RBP14.21□□□□□ -0.13
SHANK2-218ENST00000601538 FGD6Q6ZV73 1430 aa14.21□□□□□ -0.13
SHANK2-218ENST00000601538 DMTNQ08495 405 aa14.21□□□□□ -0.13
SHANK2-218ENST00000601538 STMN4Q9H169 189 aaPredicted RBP14.21□□□□□ -0.13
SHANK2-218ENST00000601538 GSTTP1A0A1W2PQM5 241 aa14.21□□□□□ -0.14
SHANK2-218ENST00000601538 MYOM3Q5VTT5 1437 aa14.21□□□□□ -0.14
SHANK2-218ENST00000601538 FMNL3Q8IVF7 1028 aa14.2□□□□□ -0.14
SHANK2-218ENST00000601538 ANO10Q9NW15 660 aa14.2□□□□□ -0.14
SHANK2-218ENST00000601538 FERP16591 822 aa14.2□□□□□ -0.14
SHANK2-218ENST00000601538 PRDM2Q13029 1718 aa14.2□□□□□ -0.14
SHANK2-218ENST00000601538 CEP83Q9Y592 693 aa14.2□□□□□ -0.14
SHANK2-218ENST00000601538 GTF2F1P35269 517 aaKnown RBP eCLIP14.2□□□□□ -0.147e-7■■■■■ 29.2
SHANK2-218ENST00000601538 FSD2A1L4K1 749 aa14.19□□□□□ -0.14
SHANK2-218ENST00000601538 FKBP15Q5T1M5 1219 aa14.19□□□□□ -0.14
SHANK2-218ENST00000601538 MSL1Q68DK7 614 aa14.19□□□□□ -0.14
SHANK2-218ENST00000601538 PEG3Q9GZU2 1588 aa14.19□□□□□ -0.14
SHANK2-218ENST00000601538 NOL3O60936 208 aaKnown RBP14.19□□□□□ -0.14
SHANK2-218ENST00000601538 ST20-MTHFSA0A0A6YYL1 179 aa14.19□□□□□ -0.14
SHANK2-218ENST00000601538 MPHOSPH10O00566 681 aaKnown RBP14.19□□□□□ -0.14
SHANK2-218ENST00000601538 APAF1O14727 1248 aa14.19□□□□□ -0.14
SHANK2-218ENST00000601538 RSRC1Q96IZ7 334 aaKnown RBP14.19□□□□□ -0.14
SHANK2-218ENST00000601538 POTEDQ86YR6 584 aa14.19□□□□□ -0.14
SHANK2-218ENST00000601538 NAP1L3Q99457 506 aaPredicted RBP14.19□□□□□ -0.14
SHANK2-218ENST00000601538 NEBLO76041 1014 aa14.19□□□□□ -0.14
SHANK2-218ENST00000601538 DNAJC21Q5F1R6 531 aaKnown RBP14.19□□□□□ -0.14
SHANK2-218ENST00000601538 SPECC1Q5M775 1068 aa14.19□□□□□ -0.14
SHANK2-218ENST00000601538 ZFYP08048 801 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms