RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 SULT6B1Q6IMI4 303 aa16.65■□□□□ 0.26
ZNF548-210ENST00000600442 FAM196AQ6ZSG2 479 aa16.65■□□□□ 0.26
ZNF548-210ENST00000600442 ARHGEF25Q86VW2 580 aa16.65■□□□□ 0.26
ZNF548-210ENST00000600442 CAMKK2Q96RR4 588 aa16.65■□□□□ 0.26
ZNF548-210ENST00000600442 STRN4Q9NRL3 753 aa16.65■□□□□ 0.26
ZNF548-210ENST00000600442 PHRF1Q9P1Y6 1649 aaKnown RBP16.64■□□□□ 0.25
ZNF548-210ENST00000600442 TMPOP42166 694 aaKnown RBP16.64■□□□□ 0.25
ZNF548-210ENST00000600442 WWC1Q8IX03 1113 aa16.64■□□□□ 0.25
ZNF548-210ENST00000600442 MYH16Q9H6N6 1097 aa16.64■□□□□ 0.25
ZNF548-210ENST00000600442 SLIT3O75094 1523 aa16.64■□□□□ 0.25
ZNF548-210ENST00000600442 APBA3O96018 575 aa16.63■□□□□ 0.25
ZNF548-210ENST00000600442 RIPK4P57078 832 aa16.63■□□□□ 0.25
ZNF548-210ENST00000600442 ZC3H6P61129 1189 aaKnown RBP16.63■□□□□ 0.25
ZNF548-210ENST00000600442 NFE2L2Q16236 605 aa16.63■□□□□ 0.25
ZNF548-210ENST00000600442 SENP3-EIF4A1A0A087X0R7 540 aa16.62■□□□□ 0.25
ZNF548-210ENST00000600442 USP35Q9P2H5 1018 aa16.62■□□□□ 0.25
ZNF548-210ENST00000600442 ZNF521Q96K83 1311 aa16.62■□□□□ 0.25
ZNF548-210ENST00000600442 NFAT5O94916 1531 aa16.61■□□□□ 0.25
ZNF548-210ENST00000600442 EVA1CP58658 441 aa16.61■□□□□ 0.25
ZNF548-210ENST00000600442 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
ZNF548-210ENST00000600442 RRP7AQ9Y3A4 280 aaKnown RBP16.61■□□□□ 0.25
ZNF548-210ENST00000600442 GTF3C3Q9Y5Q9 886 aa16.61■□□□□ 0.25
ZNF548-210ENST00000600442 SLFN5Q08AF3 891 aa16.6■□□□□ 0.25
ZNF548-210ENST00000600442 GAS2L2Q8NHY3 880 aa16.6■□□□□ 0.25
ZNF548-210ENST00000600442 IL16Q14005 1332 aa16.6■□□□□ 0.25
ZNF548-210ENST00000600442 IGSF1Q8N6C5 1336 aa16.6■□□□□ 0.25
ZNF548-210ENST00000600442 EYA1Q99502 592 aa16.59■□□□□ 0.25
ZNF548-210ENST00000600442 CPDO75976 1380 aa16.59■□□□□ 0.25
ZNF548-210ENST00000600442 BARGINQ6ZT62 677 aa16.58■□□□□ 0.24
ZNF548-210ENST00000600442 RREB1Q92766 1687 aa16.58■□□□□ 0.24
ZNF548-210ENST00000600442 ANKRD24Q8TF21 1146 aa16.57■□□□□ 0.24
ZNF548-210ENST00000600442 RTF1Q92541 710 aaKnown RBP16.57■□□□□ 0.24
ZNF548-210ENST00000600442 RCAN3Q9UKA8 241 aa16.57■□□□□ 0.24
ZNF548-210ENST00000600442 SUPT16HQ9Y5B9 1047 aaKnown RBP16.57■□□□□ 0.24
ZNF548-210ENST00000600442 NUP188Q5SRE5 1749 aa16.56■□□□□ 0.24
ZNF548-210ENST00000600442 CAMTA1Q9Y6Y1 1673 aa16.56■□□□□ 0.24
ZNF548-210ENST00000600442 ABCC6O95255 1503 aa16.56■□□□□ 0.24
ZNF548-210ENST00000600442 KDRP35968 1356 aa16.56■□□□□ 0.24
ZNF548-210ENST00000600442 CSB-PGBD3P0DP91 1061 aa16.56■□□□□ 0.24
ZNF548-210ENST00000600442 LARP1Q6PKG0 1096 aaKnown RBP16.56■□□□□ 0.24
ZNF548-210ENST00000600442 CDCA7LQ96GN5 454 aa16.56■□□□□ 0.24
ZNF548-210ENST00000600442 NBPF14Q5TI25 921 aa16.55■□□□□ 0.24
ZNF548-210ENST00000600442 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.55■□□□□ 0.24
ZNF548-210ENST00000600442 PHACTR3Q96KR7 559 aa16.55■□□□□ 0.24
ZNF548-210ENST00000600442 PEAK1Q9H792 1746 aa16.55■□□□□ 0.24
ZNF548-210ENST00000600442 HTATSF1O43719 755 aaKnown RBP16.54■□□□□ 0.24
ZNF548-210ENST00000600442 CT47B1P0C2W7 299 aaPredicted RBP16.54■□□□□ 0.24
ZNF548-210ENST00000600442 AMOTQ4VCS5 1084 aa16.54■□□□□ 0.24
ZNF548-210ENST00000600442 DUSP27Q5VZP5 1158 aa16.54■□□□□ 0.24
ZNF548-210ENST00000600442 ERICH6BQ5W0A0 696 aa16.54■□□□□ 0.24
ZNF548-210ENST00000600442 AEBP1Q8IUX7 1158 aa16.54■□□□□ 0.24
ZNF548-210ENST00000600442 LMO7Q8WWI1 1683 aa16.53■□□□□ 0.24
ZNF548-210ENST00000600442 GNAI1P63096 354 aa16.53■□□□□ 0.24
ZNF548-210ENST00000600442 PLEKHO1Q53GL0 409 aaPredicted RBP16.53■□□□□ 0.24
ZNF548-210ENST00000600442 TRMT2AQ8IZ69 625 aaKnown RBP16.53■□□□□ 0.24
ZNF548-210ENST00000600442 TRIM35Q9UPQ4 493 aa16.53■□□□□ 0.24
ZNF548-210ENST00000600442 NLRP2Q9NX02 1062 aa16.52■□□□□ 0.24
ZNF548-210ENST00000600442 ERBB3P21860 1342 aa16.51■□□□□ 0.23
ZNF548-210ENST00000600442 PARP4Q9UKK3 1724 aaKnown RBP16.51■□□□□ 0.23
ZNF548-210ENST00000600442 RAPGEF4Q8WZA2 1011 aa16.51■□□□□ 0.23
ZNF548-210ENST00000600442 THRAP3Q9Y2W1 955 aaKnown RBP16.51■□□□□ 0.23
ZNF548-210ENST00000600442 SBF2Q86WG5 1849 aa16.5■□□□□ 0.23
ZNF548-210ENST00000600442 NBPF6Q5VWK0 638 aa16.5■□□□□ 0.23
ZNF548-210ENST00000600442 NBPF4Q96M43 638 aa16.5■□□□□ 0.23
ZNF548-210ENST00000600442 IFT57Q9NWB7 429 aa16.5■□□□□ 0.23
ZNF548-210ENST00000600442 LTN1O94822 1766 aa16.5■□□□□ 0.23
ZNF548-210ENST00000600442 PLEKHG2Q9H7P9 1386 aa16.5■□□□□ 0.23
ZNF548-210ENST00000600442 GNAT3A8MTJ3 354 aa16.49■□□□□ 0.23
ZNF548-210ENST00000600442 YY1P25490 414 aa16.49■□□□□ 0.23
ZNF548-210ENST00000600442 FKBP8Q14318 412 aa16.48■□□□□ 0.23
ZNF548-210ENST00000600442 C1orf141Q5JVX7 400 aa16.48■□□□□ 0.23
ZNF548-210ENST00000600442 SPON1Q9HCB6 807 aa16.48■□□□□ 0.23
ZNF548-210ENST00000600442 PPP1R1BQ9UD71 204 aaPredicted RBP16.48■□□□□ 0.23
ZNF548-210ENST00000600442 AXIN2Q9Y2T1 843 aa16.48■□□□□ 0.23
ZNF548-210ENST00000600442 KCNQ2O43526 872 aa16.47■□□□□ 0.23
ZNF548-210ENST00000600442 TATP17735 454 aaPredicted RBP16.47■□□□□ 0.23
ZNF548-210ENST00000600442 MTHFSDQ2M296 383 aaKnown RBP16.47■□□□□ 0.23
ZNF548-210ENST00000600442 ZNF428Q96B54 188 aa16.47■□□□□ 0.23
ZNF548-210ENST00000600442 SPG7Q9UQ90 795 aa16.47■□□□□ 0.23
ZNF548-210ENST00000600442 LAS1LQ9Y4W2 734 aaKnown RBP16.47■□□□□ 0.23
ZNF548-210ENST00000600442 COL5A2P05997 1499 aaPredicted RBP16.47■□□□□ 0.23
ZNF548-210ENST00000600442 CFAP44Q96MT7 982 aa16.46■□□□□ 0.23
ZNF548-210ENST00000600442 TOM1L2Q6ZVM7 507 aa16.45■□□□□ 0.22
ZNF548-210ENST00000600442 USHBP1Q8N6Y0 703 aa16.45■□□□□ 0.22
ZNF548-210ENST00000600442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.45■□□□□ 0.22
ZNF548-210ENST00000600442 CRB1P82279 1406 aa16.45■□□□□ 0.22
ZNF548-210ENST00000600442 WDR17Q8IZU2 1322 aa16.45■□□□□ 0.22
ZNF548-210ENST00000600442 MAP3K5Q99683 1374 aa16.44■□□□□ 0.22
ZNF548-210ENST00000600442 RRP1P56182 461 aaKnown RBP16.44■□□□□ 0.22
ZNF548-210ENST00000600442 AKAP4Q5JQC9 854 aa16.44■□□□□ 0.22
ZNF548-210ENST00000600442 CHMP4AQ9BY43 222 aa16.44■□□□□ 0.22
ZNF548-210ENST00000600442 BABAM1Q9NWV8 329 aa16.44■□□□□ 0.22
ZNF548-210ENST00000600442 RNF123Q5XPI4 1314 aa16.44■□□□□ 0.22
ZNF548-210ENST00000600442 FANCIQ9NVI1 1328 aa16.44■□□□□ 0.22
ZNF548-210ENST00000600442 RGPD3A6NKT7 1758 aaPredicted RBP16.43■□□□□ 0.22
ZNF548-210ENST00000600442 RGPD4Q7Z3J3 1758 aa16.43■□□□□ 0.22
ZNF548-210ENST00000600442 DCAF8L1A6NGE4 600 aa16.43■□□□□ 0.22
ZNF548-210ENST00000600442 PLSCR1O15162 318 aa16.43■□□□□ 0.22
ZNF548-210ENST00000600442 CANXP27824 592 aaKnown RBP16.43■□□□□ 0.22
ZNF548-210ENST00000600442 ZNF530Q6P9A1 599 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms