RNA–Protein interactions for RNA: ENST00000600296.5

U2AF1L4-220, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 3

Gene U2AF1L4, Length 525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-220ENST00000600296 TRIM35Q9UPQ4 493 aa21.61■■□□□ 1.05
U2AF1L4-220ENST00000600296 RRP7AQ9Y3A4 280 aaKnown RBP21.61■■□□□ 1.05
U2AF1L4-220ENST00000600296 CRB1P82279 1406 aa21.61■■□□□ 1.05
U2AF1L4-220ENST00000600296 SALL2Q9Y467 1007 aaPredicted RBP21.6■■□□□ 1.05
U2AF1L4-220ENST00000600296 OVOS2A0A0G2JMS6 1433 aa21.57■■□□□ 1.04
U2AF1L4-220ENST00000600296 SCN11AQ9UI33 1791 aa21.57■■□□□ 1.04
U2AF1L4-220ENST00000600296 RIPK4P57078 832 aa21.57■■□□□ 1.04
U2AF1L4-220ENST00000600296 WDR63Q8IWG1 891 aa21.57■■□□□ 1.04
U2AF1L4-220ENST00000600296 GAS2L2Q8NHY3 880 aa21.57■■□□□ 1.04
U2AF1L4-220ENST00000600296 CARD10Q9BWT7 1032 aa21.57■■□□□ 1.04
U2AF1L4-220ENST00000600296 NLRP2Q9NX02 1062 aa21.57■■□□□ 1.04
U2AF1L4-220ENST00000600296 BTG4Q9NY30 223 aa21.57■■□□□ 1.04
U2AF1L4-220ENST00000600296 SIPA1L3O60292 1781 aaPredicted RBP21.56■■□□□ 1.04
U2AF1L4-220ENST00000600296 CSB-PGBD3P0DP91 1061 aa21.56■■□□□ 1.04
U2AF1L4-220ENST00000600296 RBM6P78332 1123 aaKnown RBP21.56■■□□□ 1.04
U2AF1L4-220ENST00000600296 GOLGA2Q08379 1002 aa21.56■■□□□ 1.04
U2AF1L4-220ENST00000600296 MTHFSDQ2M296 383 aaKnown RBP21.56■■□□□ 1.04
U2AF1L4-220ENST00000600296 IL16Q14005 1332 aa21.55■■□□□ 1.04
U2AF1L4-220ENST00000600296 DISP2A7MBM2 1401 aa21.55■■□□□ 1.04
U2AF1L4-220ENST00000600296 LMOD3Q0VAK6 560 aa21.55■■□□□ 1.04
U2AF1L4-220ENST00000600296 NEUROD2Q15784 382 aa21.55■■□□□ 1.04
U2AF1L4-220ENST00000600296 TRMT2AQ8IZ69 625 aaKnown RBP21.55■■□□□ 1.04
U2AF1L4-220ENST00000600296 BCL9LQ86UU0 1499 aa21.54■■□□□ 1.04
U2AF1L4-220ENST00000600296 MAP3K5Q99683 1374 aa21.53■■□□□ 1.04
U2AF1L4-220ENST00000600296 SLFN5Q08AF3 891 aa21.53■■□□□ 1.04
U2AF1L4-220ENST00000600296 LARP1Q6PKG0 1096 aaKnown RBP21.53■■□□□ 1.04
U2AF1L4-220ENST00000600296 CDCA7LQ96GN5 454 aa21.53■■□□□ 1.04
U2AF1L4-220ENST00000600296 AMOTQ4VCS5 1084 aa21.52■■□□□ 1.04
U2AF1L4-220ENST00000600296 TOM1L2Q6ZVM7 507 aa21.52■■□□□ 1.04
U2AF1L4-220ENST00000600296 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.52■■□□□ 1.048e-6■■■□□ 14.7
U2AF1L4-220ENST00000600296 TRPC5Q9UL62 973 aaPredicted RBP21.52■■□□□ 1.04
U2AF1L4-220ENST00000600296 E9PSI1 815 aa21.51■■□□□ 1.03
U2AF1L4-220ENST00000600296 HTATSF1O43719 755 aaKnown RBP21.51■■□□□ 1.03
U2AF1L4-220ENST00000600296 DUSP27Q5VZP5 1158 aa21.51■■□□□ 1.03
U2AF1L4-220ENST00000600296 SPINK5Q9NQ38 1064 aaPredicted RBP21.51■■□□□ 1.03
U2AF1L4-220ENST00000600296 TATP17735 454 aaPredicted RBP21.5■■□□□ 1.03
U2AF1L4-220ENST00000600296 PLEKHO1Q53GL0 409 aaPredicted RBP21.5■■□□□ 1.03
U2AF1L4-220ENST00000600296 RAPGEF4Q8WZA2 1011 aa21.5■■□□□ 1.03
U2AF1L4-220ENST00000600296 STRN4Q9NRL3 753 aa21.5■■□□□ 1.03
U2AF1L4-220ENST00000600296 KDM3BQ7LBC6 1761 aa21.49■■□□□ 1.03
U2AF1L4-220ENST00000600296 EVA1CP58658 441 aa21.49■■□□□ 1.03
U2AF1L4-220ENST00000600296 ATRNO75882 1429 aa21.48■■□□□ 1.03
U2AF1L4-220ENST00000600296 UNC5CLQ8IV45 518 aa21.48■■□□□ 1.03
U2AF1L4-220ENST00000600296 CEMIPQ8WUJ3 1361 aa21.48■■□□□ 1.03
U2AF1L4-220ENST00000600296 RGS12O14924 1447 aa21.47■■□□□ 1.03
U2AF1L4-220ENST00000600296 MRC1P22897 1456 aa21.47■■□□□ 1.03
U2AF1L4-220ENST00000600296 CALD1Q05682 793 aaKnown RBP21.47■■□□□ 1.03
U2AF1L4-220ENST00000600296 GNAT3A8MTJ3 354 aa21.46■■□□□ 1.03
U2AF1L4-220ENST00000600296 ZNF853P0CG23 659 aa21.45■■□□□ 1.02
U2AF1L4-220ENST00000600296 IL2RBP14784 551 aa21.45■■□□□ 1.02
U2AF1L4-220ENST00000600296 AKAP4Q5JQC9 854 aa21.45■■□□□ 1.02
U2AF1L4-220ENST00000600296 ZNF530Q6P9A1 599 aaPredicted RBP21.45■■□□□ 1.02
U2AF1L4-220ENST00000600296 UPF1Q92900 1129 aaKnown RBP eCLIP21.45■■□□□ 1.02
U2AF1L4-220ENST00000600296 GJD4Q96KN9 370 aaPredicted RBP21.45■■□□□ 1.02
U2AF1L4-220ENST00000600296 SPATA31A1Q5TZJ5 1347 aa21.45■■□□□ 1.02
U2AF1L4-220ENST00000600296 THSD7AQ9UPZ6 1657 aa21.44■■□□□ 1.02
U2AF1L4-220ENST00000600296 TOGARAM1Q9Y4F4 1720 aa21.44■■□□□ 1.02
U2AF1L4-220ENST00000600296 SPATA31A5Q5VU36 1347 aa21.44■■□□□ 1.02
U2AF1L4-220ENST00000600296 SPATA31A7Q8IWB4 1347 aa21.44■■□□□ 1.02
U2AF1L4-220ENST00000600296 IFT57Q9NWB7 429 aa21.43■■□□□ 1.02
U2AF1L4-220ENST00000600296 SPG7Q9UQ90 795 aa21.43■■□□□ 1.02
U2AF1L4-220ENST00000600296 THRAP3Q9Y2W1 955 aaKnown RBP21.43■■□□□ 1.02
U2AF1L4-220ENST00000600296 TNS2Q63HR2 1409 aa21.43■■□□□ 1.02
U2AF1L4-220ENST00000600296 KDM6AO15550 1401 aaPredicted RBP21.42■■□□□ 1.02
U2AF1L4-220ENST00000600296 GLI3P10071 1580 aa21.42■■□□□ 1.02
U2AF1L4-220ENST00000600296 THUMPD2Q9BTF0 503 aaKnown RBP21.42■■□□□ 1.02
U2AF1L4-220ENST00000600296 MYH16Q9H6N6 1097 aa21.42■■□□□ 1.02
U2AF1L4-220ENST00000600296 FANCIQ9NVI1 1328 aa21.42■■□□□ 1.02
U2AF1L4-220ENST00000600296 DCTN1Q14203 1278 aa21.41■■□□□ 1.02
U2AF1L4-220ENST00000600296 VPS72Q15906 364 aa21.41■■□□□ 1.02
U2AF1L4-220ENST00000600296 MCM10Q7L590 875 aa21.41■■□□□ 1.02
U2AF1L4-220ENST00000600296 RTF1Q92541 710 aaKnown RBP21.41■■□□□ 1.02
U2AF1L4-220ENST00000600296 PCDH11XQ9BZA7 1347 aa21.4■■□□□ 1.02
U2AF1L4-220ENST00000600296 PCDH11YQ9BZA8 1340 aa21.4■■□□□ 1.02
U2AF1L4-220ENST00000600296 PHKG2P15735 406 aa21.4■■□□□ 1.02
U2AF1L4-220ENST00000600296 GNAI1P63096 354 aa21.4■■□□□ 1.02
U2AF1L4-220ENST00000600296 C1orf141Q5JVX7 400 aa21.39■■□□□ 1.01
U2AF1L4-220ENST00000600296 IL17REQ8NFR9 667 aa21.39■■□□□ 1.01
U2AF1L4-220ENST00000600296 CFAP44Q96MT7 982 aa21.39■■□□□ 1.01
U2AF1L4-220ENST00000600296 PAPPAQ13219 1627 aa21.39■■□□□ 1.01
U2AF1L4-220ENST00000600296 ITGB4P16144 1822 aa21.39■■□□□ 1.01
U2AF1L4-220ENST00000600296 CYP27B1O15528 508 aa21.38■■□□□ 1.01
U2AF1L4-220ENST00000600296 BARGINQ6ZT62 677 aa21.38■■□□□ 1.01
U2AF1L4-220ENST00000600296 IFNL2Q8IZJ0 200 aa21.38■■□□□ 1.01
U2AF1L4-220ENST00000600296 CDCA7Q9BWT1 371 aaPredicted RBP21.38■■□□□ 1.01
U2AF1L4-220ENST00000600296 ZCRB1Q8TBF4 217 aaKnown RBP21.37■■□□□ 1.01
U2AF1L4-220ENST00000600296 CHL1O00533 1208 aa21.36■■□□□ 1.01
U2AF1L4-220ENST00000600296 RNMTO43148 476 aaKnown RBP21.36■■□□□ 1.01
U2AF1L4-220ENST00000600296 BABAM1Q9NWV8 329 aa21.36■■□□□ 1.01
U2AF1L4-220ENST00000600296 CCDC9Q9Y3X0 531 aaKnown RBP21.36■■□□□ 1.01
U2AF1L4-220ENST00000600296 UBR2Q8IWV8 1755 aa21.35■■□□□ 1.01
U2AF1L4-220ENST00000600296 DOT1LQ8TEK3 1739 aa21.35■■□□□ 1.01
U2AF1L4-220ENST00000600296 RNF123Q5XPI4 1314 aa21.34■■□□□ 1.01
U2AF1L4-220ENST00000600296 HSP90AB1P08238 724 aaKnown RBP21.34■■□□□ 1.01
U2AF1L4-220ENST00000600296 CT47B1P0C2W7 299 aaPredicted RBP21.34■■□□□ 1.01
U2AF1L4-220ENST00000600296 NKX1-1Q15270 411 aaPredicted RBP21.34■■□□□ 1.01
U2AF1L4-220ENST00000600296 TSR2Q969E8 191 aaKnown RBP21.34■■□□□ 1.01
U2AF1L4-220ENST00000600296 MBIPQ9NS73 344 aa21.34■■□□□ 1.01
U2AF1L4-220ENST00000600296 USP35Q9P2H5 1018 aa21.34■■□□□ 1.01
U2AF1L4-220ENST00000600296 CACNA1FO60840 1977 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms