RNA–Protein interactions for RNA: ENST00000600139.1

C19orf54-210, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-210ENST00000600139 TERF2IPQ9NYB0 399 aa12.43□□□□□ -0.42
C19orf54-210ENST00000600139 RTL1A6NKG5 1358 aa12.43□□□□□ -0.42
C19orf54-210ENST00000600139 CHD4Q14839 1912 aa12.43□□□□□ -0.42
C19orf54-210ENST00000600139 NBPF6Q5VWK0 638 aa12.42□□□□□ -0.42
C19orf54-210ENST00000600139 NBPF4Q96M43 638 aa12.42□□□□□ -0.42
C19orf54-210ENST00000600139 PKD1L3Q7Z443 1732 aa12.42□□□□□ -0.42
C19orf54-210ENST00000600139 TAF1LQ8IZX4 1826 aa12.41□□□□□ -0.42
C19orf54-210ENST00000600139 FYB1O15117 783 aa12.41□□□□□ -0.42
C19orf54-210ENST00000600139 LTV1Q96GA3 475 aaPredicted RBP12.41□□□□□ -0.42
C19orf54-210ENST00000600139 MAP2P11137 1827 aaKnown RBP12.4□□□□□ -0.42
C19orf54-210ENST00000600139 RRS1Q15050 365 aaKnown RBP12.4□□□□□ -0.42
C19orf54-210ENST00000600139 ZNF784Q8NCA9 323 aaPredicted RBP12.4□□□□□ -0.42
C19orf54-210ENST00000600139 USP47Q96K76 1375 aa12.4□□□□□ -0.42
C19orf54-210ENST00000600139 C5P01031 1676 aa12.39□□□□□ -0.43
C19orf54-210ENST00000600139 PRIM1P49642 420 aaKnown RBP12.39□□□□□ -0.43
C19orf54-210ENST00000600139 USHBP1Q8N6Y0 703 aa12.39□□□□□ -0.43
C19orf54-210ENST00000600139 CARD14Q9BXL6 1004 aa12.39□□□□□ -0.43
C19orf54-210ENST00000600139 GGNBP2Q9H3C7 697 aa12.39□□□□□ -0.43
C19orf54-210ENST00000600139 ITGB4P16144 1822 aa12.39□□□□□ -0.43
C19orf54-210ENST00000600139 AMIGO3Q86WK7 504 aa12.38□□□□□ -0.43
C19orf54-210ENST00000600139 DDX54Q8TDD1 881 aaKnown RBP12.38□□□□□ -0.43
C19orf54-210ENST00000600139 ARXQ96QS3 562 aa12.38□□□□□ -0.43
C19orf54-210ENST00000600139 SLC27A3Q5K4L6 730 aa12.37□□□□□ -0.43
C19orf54-210ENST00000600139 COG3Q96JB2 828 aa12.37□□□□□ -0.43
C19orf54-210ENST00000600139 INSRP06213 1382 aa12.37□□□□□ -0.43
C19orf54-210ENST00000600139 HSP90AB2PQ58FF8 381 aa12.36□□□□□ -0.43
C19orf54-210ENST00000600139 NLGN2Q8NFZ4 835 aa12.36□□□□□ -0.43
C19orf54-210ENST00000600139 UBR3Q6ZT12 1888 aa12.36□□□□□ -0.43
C19orf54-210ENST00000600139 CYP27B1O15528 508 aa12.35□□□□□ -0.43
C19orf54-210ENST00000600139 ZCRB1Q8TBF4 217 aaKnown RBP12.35□□□□□ -0.43
C19orf54-210ENST00000600139 NSD3Q9BZ95 1437 aa12.34□□□□□ -0.43
C19orf54-210ENST00000600139 C4BP0C0L5 1744 aa12.34□□□□□ -0.43
C19orf54-210ENST00000600139 FLT4P35916 1363 aa12.33□□□□□ -0.44
C19orf54-210ENST00000600139 AMPHP49418 695 aa12.33□□□□□ -0.44
C19orf54-210ENST00000600139 COL23A1Q86Y22 540 aaPredicted RBP12.33□□□□□ -0.44
C19orf54-210ENST00000600139 EMILIN1Q9Y6C2 1016 aa12.33□□□□□ -0.44
C19orf54-210ENST00000600139 KIF24Q5T7B8 1368 aa12.32□□□□□ -0.44
C19orf54-210ENST00000600139 YBX3P16989 372 aaKnown RBP eCLIP12.32□□□□□ -0.44
C19orf54-210ENST00000600139 SLC16A10Q8TF71 515 aa12.32□□□□□ -0.44
C19orf54-210ENST00000600139 KIAA1551Q9HCM1 1747 aa12.31□□□□□ -0.44
C19orf54-210ENST00000600139 CCNL1Q9UK58 526 aaPredicted RBP12.31□□□□□ -0.44
C19orf54-210ENST00000600139 SMIM5Q71RC9 77 aa12.3□□□□□ -0.44
C19orf54-210ENST00000600139 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
C19orf54-210ENST00000600139 CGNL1Q0VF96 1302 aa12.3□□□□□ -0.44
C19orf54-210ENST00000600139 PALLDQ8WX93 1383 aa12.3□□□□□ -0.44
C19orf54-210ENST00000600139 TMF1P82094 1093 aa12.29□□□□□ -0.44
C19orf54-210ENST00000600139 TFCP2L1Q9NZI6 479 aa12.29□□□□□ -0.44
C19orf54-210ENST00000600139 NKX1-1Q15270 411 aaPredicted RBP12.28□□□□□ -0.44
C19orf54-210ENST00000600139 PCDH11XQ9BZA7 1347 aa12.28□□□□□ -0.44
C19orf54-210ENST00000600139 PCDH11YQ9BZA8 1340 aa12.28□□□□□ -0.44
C19orf54-210ENST00000600139 MSL1Q68DK7 614 aa12.27□□□□□ -0.45
C19orf54-210ENST00000600139 PIGBQ92521 554 aa12.27□□□□□ -0.45
C19orf54-210ENST00000600139 ADCY9O60503 1353 aa12.27□□□□□ -0.45
C19orf54-210ENST00000600139 KDRP35968 1356 aa12.27□□□□□ -0.45
C19orf54-210ENST00000600139 SMG6Q86US8 1419 aaKnown RBP12.27□□□□□ -0.45
C19orf54-210ENST00000600139 RAPGEF4Q8WZA2 1011 aa12.26□□□□□ -0.45
C19orf54-210ENST00000600139 EYA1Q99502 592 aa12.26□□□□□ -0.45
C19orf54-210ENST00000600139 WASHC2AQ641Q2 1341 aa12.26□□□□□ -0.45
C19orf54-210ENST00000600139 COL5A3P25940 1745 aaPredicted RBP12.25□□□□□ -0.45
C19orf54-210ENST00000600139 TATP17735 454 aaPredicted RBP12.25□□□□□ -0.45
C19orf54-210ENST00000600139 LINC00116Q8NCU8 138 aa12.25□□□□□ -0.45
C19orf54-210ENST00000600139 POLKQ9UBT6 870 aa12.25□□□□□ -0.45
C19orf54-210ENST00000600139 CICQ96RK0 1608 aaPredicted RBP12.25□□□□□ -0.45
C19orf54-210ENST00000600139 ZNF831Q5JPB2 1677 aa12.25□□□□□ -0.45
C19orf54-210ENST00000600139 KIF13BQ9NQT8 1826 aa12.25□□□□□ -0.45
C19orf54-210ENST00000600139 DCAF8L1A6NGE4 600 aa12.24□□□□□ -0.45
C19orf54-210ENST00000600139 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
C19orf54-210ENST00000600139 POLD1P28340 1107 aa12.24□□□□□ -0.45
C19orf54-210ENST00000600139 C1QTNF8P60827 252 aa12.24□□□□□ -0.45
C19orf54-210ENST00000600139 ITPK1Q13572 414 aa12.24□□□□□ -0.45
C19orf54-210ENST00000600139 SLC4A9Q96Q91 983 aa12.24□□□□□ -0.45
C19orf54-210ENST00000600139 MYH14Q7Z406 1995 aaKnown RBP12.23□□□□□ -0.45
C19orf54-210ENST00000600139 KDM6AO15550 1401 aaPredicted RBP12.23□□□□□ -0.45
C19orf54-210ENST00000600139 GPR162Q16538 588 aa12.23□□□□□ -0.45
C19orf54-210ENST00000600139 MPRIPQ6WCQ1 1025 aa12.23□□□□□ -0.45
C19orf54-210ENST00000600139 ADAMTS7Q9UKP4 1686 aa12.22□□□□□ -0.45
C19orf54-210ENST00000600139 TRIM26Q12899 539 aaPredicted RBP12.22□□□□□ -0.45
C19orf54-210ENST00000600139 EIF4A2Q14240 407 aaKnown RBP12.22□□□□□ -0.45
C19orf54-210ENST00000600139 KLHL34Q8N239 644 aa12.22□□□□□ -0.45
C19orf54-210ENST00000600139 ASAP1Q9ULH1 1129 aa12.22□□□□□ -0.45
C19orf54-210ENST00000600139 C4AP0C0L4 1744 aa12.22□□□□□ -0.45
C19orf54-210ENST00000600139 IGSF1Q8N6C5 1336 aa12.21□□□□□ -0.45
C19orf54-210ENST00000600139 PHKG2P15735 406 aa12.21□□□□□ -0.45
C19orf54-210ENST00000600139 ATP10DQ9P241 1426 aa12.2□□□□□ -0.46
C19orf54-210ENST00000600139 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.2□□□□□ -0.46
C19orf54-210ENST00000600139 LOC102724428A0A0B4J2F2 783 aa12.2□□□□□ -0.46
C19orf54-210ENST00000600139 SIK1P57059 783 aa12.2□□□□□ -0.46
C19orf54-210ENST00000600139 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.2□□□□□ -0.46
C19orf54-210ENST00000600139 BRCA1P38398 1863 aaKnown RBP12.2□□□□□ -0.46
C19orf54-210ENST00000600139 TJP1Q07157 1748 aa12.2□□□□□ -0.46
C19orf54-210ENST00000600139 PLEKHG2Q9H7P9 1386 aa12.19□□□□□ -0.46
C19orf54-210ENST00000600139 CDCA8Q53HL2 280 aa12.19□□□□□ -0.46
C19orf54-210ENST00000600139 ATG3Q9NT62 314 aa12.19□□□□□ -0.46
C19orf54-210ENST00000600139 CD2APQ9Y5K6 639 aa12.19□□□□□ -0.46
C19orf54-210ENST00000600139 PXDNLA1KZ92 1463 aa12.19□□□□□ -0.46
C19orf54-210ENST00000600139 PELP1Q8IZL8 1130 aaKnown RBP12.18□□□□□ -0.46
C19orf54-210ENST00000600139 N4BP2Q86UW6 1770 aaPredicted RBP12.18□□□□□ -0.46
C19orf54-210ENST00000600139 AEBP1Q8IUX7 1158 aa12.17□□□□□ -0.46
C19orf54-210ENST00000600139 SMARCC1Q92922 1105 aaPredicted RBP12.17□□□□□ -0.46
C19orf54-210ENST00000600139 C10orf71Q711Q0 1435 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms