RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 TNS1Q9HBL0 1735 aaKnown RBP31.04■■■□□ 2.56
IRF3-220ENST00000598108 ACSBG1Q96GR2 724 aa31.03■■■□□ 2.56
IRF3-220ENST00000598108 NCAPD2Q15021 1401 aa31.02■■■□□ 2.56
IRF3-220ENST00000598108 MTHFSP49914 203 aa31.01■■■□□ 2.55
IRF3-220ENST00000598108 IGSF1Q8N6C5 1336 aa30.96■■■□□ 2.55
IRF3-220ENST00000598108 PLSCR1O15162 318 aa30.95■■■□□ 2.55
IRF3-220ENST00000598108 IL13P35225 146 aa30.95■■■□□ 2.55
IRF3-220ENST00000598108 ZEB1P37275 1124 aaPredicted RBP30.94■■■□□ 2.54
IRF3-220ENST00000598108 PARD3Q8TEW0 1356 aa30.93■■■□□ 2.54
IRF3-220ENST00000598108 SBF2Q86WG5 1849 aa30.93■■■□□ 2.54
IRF3-220ENST00000598108 CYP27B1O15528 508 aa30.92■■■□□ 2.54
IRF3-220ENST00000598108 PROM2Q8N271 834 aa30.91■■■□□ 2.54
IRF3-220ENST00000598108 PRIM1P49642 420 aaKnown RBP30.9■■■□□ 2.54
IRF3-220ENST00000598108 AEBP1Q8IUX7 1158 aa30.9■■■□□ 2.54
IRF3-220ENST00000598108 PCDH11XQ9BZA7 1347 aa30.89■■■□□ 2.54
IRF3-220ENST00000598108 PCDH11YQ9BZA8 1340 aa30.89■■■□□ 2.54
IRF3-220ENST00000598108 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.87■■■□□ 2.53
IRF3-220ENST00000598108 SPG7Q9UQ90 795 aa30.87■■■□□ 2.53
IRF3-220ENST00000598108 PSDA5PKW4 1024 aaPredicted RBP30.86■■■□□ 2.53
IRF3-220ENST00000598108 SHANK3Q9BYB0 1731 aa30.86■■■□□ 2.53
IRF3-220ENST00000598108 SULT6B1Q6IMI4 303 aa30.85■■■□□ 2.53
IRF3-220ENST00000598108 SYTL4Q96C24 671 aaPredicted RBP30.85■■■□□ 2.53
IRF3-220ENST00000598108 DDX10Q13206 875 aaKnown RBP30.83■■■□□ 2.53
IRF3-220ENST00000598108 TXNRD1Q16881 649 aa30.83■■■□□ 2.53
IRF3-220ENST00000598108 NHSQ6T4R5 1651 aa30.82■■■□□ 2.52
IRF3-220ENST00000598108 DIAPH1O60610 1272 aaKnown RBP30.82■■■□□ 2.52
IRF3-220ENST00000598108 R3HDM1Q15032 1099 aaKnown RBP30.82■■■□□ 2.52
IRF3-220ENST00000598108 PPP2R1AP30153 589 aa30.81■■■□□ 2.52
IRF3-220ENST00000598108 NKX1-1Q15270 411 aaPredicted RBP30.81■■■□□ 2.52
IRF3-220ENST00000598108 KDRP35968 1356 aa30.79■■■□□ 2.52
IRF3-220ENST00000598108 PHKG2P15735 406 aa30.78■■■□□ 2.52
IRF3-220ENST00000598108 SRCAPQ6ZRS2 3230 aa30.77■■■□□ 2.52
IRF3-220ENST00000598108 PLEKHO1Q53GL0 409 aaPredicted RBP30.77■■■□□ 2.52
IRF3-220ENST00000598108 IFNL2Q8IZJ0 200 aa30.77■■■□□ 2.52
IRF3-220ENST00000598108 PKD1L3Q7Z443 1732 aa30.76■■■□□ 2.52
IRF3-220ENST00000598108 HMOX1P09601 288 aa30.76■■■□□ 2.51
IRF3-220ENST00000598108 NBPF14Q5TI25 921 aa30.76■■■□□ 2.51
IRF3-220ENST00000598108 COL3A1P02461 1466 aaPredicted RBP30.76■■■□□ 2.51
IRF3-220ENST00000598108 RREB1Q92766 1687 aa30.75■■■□□ 2.51
IRF3-220ENST00000598108 ANO8Q9HCE9 1232 aaPredicted RBP30.75■■■□□ 2.51
IRF3-220ENST00000598108 KAT6BQ8WYB5 2073 aa30.74■■■□□ 2.51
IRF3-220ENST00000598108 PLEKHG2Q9H7P9 1386 aa30.74■■■□□ 2.51
IRF3-220ENST00000598108 AMOTQ4VCS5 1084 aa30.73■■■□□ 2.51
IRF3-220ENST00000598108 MPRIPQ6WCQ1 1025 aa30.73■■■□□ 2.51
IRF3-220ENST00000598108 NUP188Q5SRE5 1749 aa30.73■■■□□ 2.51
IRF3-220ENST00000598108 ZNF530Q6P9A1 599 aaPredicted RBP30.72■■■□□ 2.51
IRF3-220ENST00000598108 LRRC4BQ9NT99 713 aa30.72■■■□□ 2.51
IRF3-220ENST00000598108 BTAF1O14981 1849 aa30.71■■■□□ 2.51
IRF3-220ENST00000598108 RGPD3A6NKT7 1758 aaPredicted RBP30.71■■■□□ 2.51
IRF3-220ENST00000598108 RGPD4Q7Z3J3 1758 aa30.71■■■□□ 2.51
IRF3-220ENST00000598108 DOT1LQ8TEK3 1739 aa30.7■■■□□ 2.51
IRF3-220ENST00000598108 U2SURPO15042 1029 aaKnown RBP30.7■■■□□ 2.51
IRF3-220ENST00000598108 KCNQ4P56696 695 aa30.69■■■□□ 2.5
IRF3-220ENST00000598108 PIGBQ92521 554 aa30.69■■■□□ 2.5
IRF3-220ENST00000598108 CFAP53Q96M91 514 aa30.69■■■□□ 2.5
IRF3-220ENST00000598108 SLC27A3Q5K4L6 730 aa30.64■■■□□ 2.5
IRF3-220ENST00000598108 DCAF5Q96JK2 942 aa30.64■■■□□ 2.5
IRF3-220ENST00000598108 HSP90AB1P08238 724 aaKnown RBP30.63■■■□□ 2.49
IRF3-220ENST00000598108 C1orf141Q5JVX7 400 aa30.63■■■□□ 2.49
IRF3-220ENST00000598108 TOGARAM1Q9Y4F4 1720 aa30.62■■■□□ 2.49
IRF3-220ENST00000598108 SLC15A2Q16348 729 aa30.62■■■□□ 2.49
IRF3-220ENST00000598108 STK32BQ9NY57 414 aa30.62■■■□□ 2.49
IRF3-220ENST00000598108 TMOD3Q9NYL9 352 aa30.62■■■□□ 2.49
IRF3-220ENST00000598108 MTHFSDQ2M296 383 aaKnown RBP30.61■■■□□ 2.49
IRF3-220ENST00000598108 ERVV-2B6SEH9 535 aa30.6■■■□□ 2.49
IRF3-220ENST00000598108 KDM6AO15550 1401 aaPredicted RBP30.6■■■□□ 2.49
IRF3-220ENST00000598108 PDGFDQ9GZP0 370 aaPredicted RBP30.6■■■□□ 2.49
IRF3-220ENST00000598108 CCNL1Q9UK58 526 aaPredicted RBP30.6■■■□□ 2.49
IRF3-220ENST00000598108 RALBP1Q15311 655 aa30.59■■■□□ 2.49
IRF3-220ENST00000598108 ZNF827Q17R98 1081 aa30.59■■■□□ 2.49
IRF3-220ENST00000598108 ASAP1Q9ULH1 1129 aa30.59■■■□□ 2.49
IRF3-220ENST00000598108 NUDCQ9Y266 331 aa30.59■■■□□ 2.49
IRF3-220ENST00000598108 PALLDQ8WX93 1383 aa30.58■■■□□ 2.49
IRF3-220ENST00000598108 AKAP4Q5JQC9 854 aa30.58■■■□□ 2.49
IRF3-220ENST00000598108 SMARCC1Q92922 1105 aaPredicted RBP30.57■■■□□ 2.48
IRF3-220ENST00000598108 U2AF1L5P0DN76 240 aaPredicted RBP30.56■■■□□ 2.48
IRF3-220ENST00000598108 U2AF1Q01081 240 aaKnown RBP eCLIP30.56■■■□□ 2.48
IRF3-220ENST00000598108 AKT1S1Q96B36 256 aa30.56■■■□□ 2.48
IRF3-220ENST00000598108 RSPH6AQ9H0K4 717 aa30.56■■■□□ 2.48
IRF3-220ENST00000598108 ATG3Q9NT62 314 aa30.56■■■□□ 2.48
IRF3-220ENST00000598108 PHACTR3Q96KR7 559 aa30.54■■■□□ 2.48
IRF3-220ENST00000598108 LGR6Q9HBX8 967 aa30.54■■■□□ 2.48
IRF3-220ENST00000598108 PRKAR2BP31323 418 aa30.53■■■□□ 2.48
IRF3-220ENST00000598108 CABP4P57796 275 aa30.53■■■□□ 2.48
IRF3-220ENST00000598108 PAPPAQ13219 1627 aa30.52■■■□□ 2.48
IRF3-220ENST00000598108 ITGB4P16144 1822 aa30.52■■■□□ 2.48
IRF3-220ENST00000598108 ZNF316A6NFI3 1004 aaPredicted RBP30.51■■■□□ 2.47
IRF3-220ENST00000598108 NFATC2IPQ8NCF5 419 aa30.51■■■□□ 2.47
IRF3-220ENST00000598108 LOC102724428A0A0B4J2F2 783 aa30.49■■■□□ 2.47
IRF3-220ENST00000598108 RNMTO43148 476 aaKnown RBP30.49■■■□□ 2.47
IRF3-220ENST00000598108 FCHSD2O94868 740 aa30.49■■■□□ 2.47
IRF3-220ENST00000598108 SIK1P57059 783 aa30.49■■■□□ 2.47
IRF3-220ENST00000598108 LY75O60449 1722 aa30.49■■■□□ 2.47
IRF3-220ENST00000598108 GAS2L2Q8NHY3 880 aa30.47■■■□□ 2.47
IRF3-220ENST00000598108 TFCP2L1Q9NZI6 479 aa30.46■■■□□ 2.47
IRF3-220ENST00000598108 MYBBP1AQ9BQG0 1328 aaKnown RBP30.46■■■□□ 2.47
IRF3-220ENST00000598108 ZBTB7AO95365 584 aa30.45■■■□□ 2.47
IRF3-220ENST00000598108 SLC4A9Q96Q91 983 aa30.44■■■□□ 2.46
IRF3-220ENST00000598108 PRKRIP1Q9H875 184 aaPredicted RBP30.44■■■□□ 2.46
IRF3-220ENST00000598108 SLC52A2Q9HAB3 445 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms