RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 SMG6Q86US8 1419 aaKnown RBP21.08■□□□□ 0.97
TGFB1-202ENST00000597453 INSRP06213 1382 aa21.08■□□□□ 0.96
TGFB1-202ENST00000597453 ZCRB1Q8TBF4 217 aaKnown RBP21.07■□□□□ 0.96
TGFB1-202ENST00000597453 LRRC4BQ9NT99 713 aa21.07■□□□□ 0.96
TGFB1-202ENST00000597453 FLT4P35916 1363 aa21.07■□□□□ 0.96
TGFB1-202ENST00000597453 ANKRD26Q9UPS8 1709 aa21.07■□□□□ 0.96
TGFB1-202ENST00000597453 PTGER2P43116 358 aa21.06■□□□□ 0.96
TGFB1-202ENST00000597453 NSD2O96028 1365 aa21.06■□□□□ 0.96
TGFB1-202ENST00000597453 LY75O60449 1722 aa21.06■□□□□ 0.96
TGFB1-202ENST00000597453 PRIM1P49642 420 aaKnown RBP21.05■□□□□ 0.96
TGFB1-202ENST00000597453 ZNF827Q17R98 1081 aa21.05■□□□□ 0.96
TGFB1-202ENST00000597453 ATF5Q9Y2D1 282 aaPredicted RBP21.05■□□□□ 0.96
TGFB1-202ENST00000597453 KIF24Q5T7B8 1368 aa21.05■□□□□ 0.96
TGFB1-202ENST00000597453 SYTL4Q96C24 671 aaPredicted RBP21.04■□□□□ 0.96
TGFB1-202ENST00000597453 EMILIN1Q9Y6C2 1016 aa21.04■□□□□ 0.96
TGFB1-202ENST00000597453 MAP2P11137 1827 aaKnown RBP21.04■□□□□ 0.96
TGFB1-202ENST00000597453 TUBGCP6Q96RT7 1819 aa21.03■□□□□ 0.96
TGFB1-202ENST00000597453 QSER1Q2KHR3 1735 aa21.03■□□□□ 0.96
TGFB1-202ENST00000597453 RAPGEF4Q8WZA2 1011 aa21.02■□□□□ 0.96
TGFB1-202ENST00000597453 CGNL1Q0VF96 1302 aa21.02■□□□□ 0.95
TGFB1-202ENST00000597453 MTFR1LQ9H019 292 aa21.01■□□□□ 0.95
TGFB1-202ENST00000597453 TATP17735 454 aaPredicted RBP21■□□□□ 0.95
TGFB1-202ENST00000597453 KCNQ4P56696 695 aa21■□□□□ 0.95
TGFB1-202ENST00000597453 SLC27A3Q5K4L6 730 aa21■□□□□ 0.95
TGFB1-202ENST00000597453 AKT1S1Q96B36 256 aa21■□□□□ 0.95
TGFB1-202ENST00000597453 SGIP1Q9BQI5 828 aa21■□□□□ 0.95
TGFB1-202ENST00000597453 POLR3GLQ9BT43 218 aa21■□□□□ 0.95
TGFB1-202ENST00000597453 PKD1L3Q7Z443 1732 aa20.99■□□□□ 0.95
TGFB1-202ENST00000597453 TOGARAM1Q9Y4F4 1720 aa20.98■□□□□ 0.95
TGFB1-202ENST00000597453 NCAPD2Q15021 1401 aa20.97■□□□□ 0.95
TGFB1-202ENST00000597453 PPM1GO15355 546 aaPredicted RBP20.97■□□□□ 0.95
TGFB1-202ENST00000597453 HSPA5P11021 654 aaKnown RBP20.97■□□□□ 0.95
TGFB1-202ENST00000597453 EIF4G2P78344 907 aaKnown RBP eCLIP20.96■□□□□ 0.95
TGFB1-202ENST00000597453 ITGB4P16144 1822 aa20.96■□□□□ 0.95
TGFB1-202ENST00000597453 PCDH11XQ9BZA7 1347 aa20.96■□□□□ 0.95
TGFB1-202ENST00000597453 PCDH11YQ9BZA8 1340 aa20.96■□□□□ 0.95
TGFB1-202ENST00000597453 PNPLA7Q6ZV29 1317 aa20.95■□□□□ 0.94
TGFB1-202ENST00000597453 UTRNP46939 3433 aa20.95■□□□□ 0.94
TGFB1-202ENST00000597453 COL24A1Q17RW2 1714 aa20.95■□□□□ 0.94
TGFB1-202ENST00000597453 CYP27B1O15528 508 aa20.94■□□□□ 0.94
TGFB1-202ENST00000597453 FHDC1Q9C0D6 1143 aaPredicted RBP20.94■□□□□ 0.94
TGFB1-202ENST00000597453 WASHC2AQ641Q2 1341 aa20.94■□□□□ 0.94
TGFB1-202ENST00000597453 POLKQ9UBT6 870 aa20.93■□□□□ 0.94
TGFB1-202ENST00000597453 CCNL1Q9UK58 526 aaPredicted RBP20.93■□□□□ 0.94
TGFB1-202ENST00000597453 C5P01031 1676 aa20.93■□□□□ 0.94
TGFB1-202ENST00000597453 SYT17Q9BSW7 474 aa20.92■□□□□ 0.94
TGFB1-202ENST00000597453 TNNT2P45379 298 aaPredicted RBP20.91■□□□□ 0.94
TGFB1-202ENST00000597453 TAF1LQ8IZX4 1826 aa20.91■□□□□ 0.94
TGFB1-202ENST00000597453 ARXQ96QS3 562 aa20.91■□□□□ 0.94
TGFB1-202ENST00000597453 EYA1Q99502 592 aa20.91■□□□□ 0.94
TGFB1-202ENST00000597453 DCAF8L1A6NGE4 600 aa20.9■□□□□ 0.94
TGFB1-202ENST00000597453 YY1P25490 414 aa20.9■□□□□ 0.94
TGFB1-202ENST00000597453 TFCP2L1Q9NZI6 479 aa20.9■□□□□ 0.94
TGFB1-202ENST00000597453 PANK3Q9H999 370 aa20.89■□□□□ 0.93
TGFB1-202ENST00000597453 MPRIPQ6WCQ1 1025 aa20.88■□□□□ 0.93
TGFB1-202ENST00000597453 SLC16A10Q8TF71 515 aa20.88■□□□□ 0.93
TGFB1-202ENST00000597453 PALLDQ8WX93 1383 aa20.87■□□□□ 0.93
TGFB1-202ENST00000597453 MAP3K5Q99683 1374 aa20.86■□□□□ 0.93
TGFB1-202ENST00000597453 EIF4A2Q14240 407 aaKnown RBP20.86■□□□□ 0.93
TGFB1-202ENST00000597453 SPG7Q9UQ90 795 aa20.85■□□□□ 0.93
TGFB1-202ENST00000597453 NKX1-1Q15270 411 aaPredicted RBP20.84■□□□□ 0.93
TGFB1-202ENST00000597453 COL23A1Q86Y22 540 aaPredicted RBP20.83■□□□□ 0.93
TGFB1-202ENST00000597453 PIGBQ92521 554 aa20.83■□□□□ 0.93
TGFB1-202ENST00000597453 C4BP0C0L5 1744 aa20.82■□□□□ 0.92
TGFB1-202ENST00000597453 POLD1P28340 1107 aa20.82■□□□□ 0.92
TGFB1-202ENST00000597453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.82■□□□□ 0.92
TGFB1-202ENST00000597453 MSH5O43196 834 aa20.8■□□□□ 0.92
TGFB1-202ENST00000597453 PHKG2P15735 406 aa20.8■□□□□ 0.92
TGFB1-202ENST00000597453 CHD4Q14839 1912 aa20.8■□□□□ 0.92
TGFB1-202ENST00000597453 IGSF1Q8N6C5 1336 aa20.79■□□□□ 0.92
TGFB1-202ENST00000597453 UBR3Q6ZT12 1888 aa20.79■□□□□ 0.92
TGFB1-202ENST00000597453 KLHL34Q8N239 644 aa20.79■□□□□ 0.92
TGFB1-202ENST00000597453 SMARCC1Q92922 1105 aaPredicted RBP20.79■□□□□ 0.92
TGFB1-202ENST00000597453 IFNL2Q8IZJ0 200 aa20.78■□□□□ 0.92
TGFB1-202ENST00000597453 MSL1Q68DK7 614 aa20.77■□□□□ 0.92
TGFB1-202ENST00000597453 MORC1Q86VD1 984 aa20.77■□□□□ 0.92
TGFB1-202ENST00000597453 PLEKHG2Q9H7P9 1386 aa20.76■□□□□ 0.91
TGFB1-202ENST00000597453 AMIGO3Q86WK7 504 aa20.76■□□□□ 0.91
TGFB1-202ENST00000597453 TMOD3Q9NYL9 352 aa20.76■□□□□ 0.91
TGFB1-202ENST00000597453 GOLGB1Q14789 3259 aaKnown RBP20.75■□□□□ 0.91
TGFB1-202ENST00000597453 KIF7Q2M1P5 1343 aa20.75■□□□□ 0.91
TGFB1-202ENST00000597453 LOC102724428A0A0B4J2F2 783 aa20.74■□□□□ 0.91
TGFB1-202ENST00000597453 SIK1P57059 783 aa20.74■□□□□ 0.91
TGFB1-202ENST00000597453 NLGN2Q8NFZ4 835 aa20.74■□□□□ 0.91
TGFB1-202ENST00000597453 ASAP1Q9ULH1 1129 aa20.74■□□□□ 0.91
TGFB1-202ENST00000597453 KNSTRNQ9Y448 316 aa20.74■□□□□ 0.91
TGFB1-202ENST00000597453 SMIM5Q71RC9 77 aa20.73■□□□□ 0.91
TGFB1-202ENST00000597453 AK7Q96M32 723 aa20.73■□□□□ 0.91
TGFB1-202ENST00000597453 AEBP1Q8IUX7 1158 aa20.72■□□□□ 0.91
TGFB1-202ENST00000597453 LINC00116Q8NCU8 138 aa20.72■□□□□ 0.91
TGFB1-202ENST00000597453 FLAD1Q8NFF5 587 aa20.72■□□□□ 0.91
TGFB1-202ENST00000597453 HMGB2P26583 209 aaKnown RBP20.71■□□□□ 0.91
TGFB1-202ENST00000597453 ITPK1Q13572 414 aa20.71■□□□□ 0.91
TGFB1-202ENST00000597453 GPR162Q16538 588 aa20.71■□□□□ 0.91
TGFB1-202ENST00000597453 AMER1Q5JTC6 1135 aaPredicted RBP20.71■□□□□ 0.91
TGFB1-202ENST00000597453 ATG3Q9NT62 314 aa20.71■□□□□ 0.91
TGFB1-202ENST00000597453 KDM6AO15550 1401 aaPredicted RBP20.7■□□□□ 0.9
TGFB1-202ENST00000597453 PHF14O94880 888 aa20.7■□□□□ 0.9
TGFB1-202ENST00000597453 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.69■□□□□ 0.9
TGFB1-202ENST00000597453 PLEKHO1Q53GL0 409 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms