RNA–Protein interactions for RNA: ENST00000596809.5

C19orf54-205, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 5

Gene C19orf54, Length 1,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-205ENST00000596809 RGPD2P0DJD1 1756 aa29.66■■■□□ 2.34
C19orf54-205ENST00000596809 NHSQ6T4R5 1651 aa29.66■■■□□ 2.34
C19orf54-205ENST00000596809 TATP17735 454 aaPredicted RBP29.65■■■□□ 2.34
C19orf54-205ENST00000596809 WASHC2AQ641Q2 1341 aa29.65■■■□□ 2.34
C19orf54-205ENST00000596809 TNNT2P45379 298 aaPredicted RBP29.63■■■□□ 2.33
C19orf54-205ENST00000596809 PRIM1P49642 420 aaKnown RBP29.61■■■□□ 2.33
C19orf54-205ENST00000596809 SYTL4Q96C24 671 aaPredicted RBP29.6■■■□□ 2.33
C19orf54-205ENST00000596809 STK32BQ9NY57 414 aa29.6■■■□□ 2.33
C19orf54-205ENST00000596809 SLC15A2Q16348 729 aa29.57■■■□□ 2.32
C19orf54-205ENST00000596809 SPON1Q9HCB6 807 aa29.57■■■□□ 2.32
C19orf54-205ENST00000596809 KIF7Q2M1P5 1343 aa29.56■■■□□ 2.32
C19orf54-205ENST00000596809 EYA1Q99502 592 aa29.56■■■□□ 2.32
C19orf54-205ENST00000596809 KNSTRNQ9Y448 316 aa29.56■■■□□ 2.32
C19orf54-205ENST00000596809 NSD2O96028 1365 aa29.55■■■□□ 2.32
C19orf54-205ENST00000596809 PDGFDQ9GZP0 370 aaPredicted RBP29.54■■■□□ 2.32
C19orf54-205ENST00000596809 BTAF1O14981 1849 aa29.54■■■□□ 2.32
C19orf54-205ENST00000596809 PCDH11XQ9BZA7 1347 aa29.53■■■□□ 2.32
C19orf54-205ENST00000596809 PCDH11YQ9BZA8 1340 aa29.53■■■□□ 2.32
C19orf54-205ENST00000596809 MORC1Q86VD1 984 aa29.53■■■□□ 2.32
C19orf54-205ENST00000596809 LRRC4BQ9NT99 713 aa29.53■■■□□ 2.32
C19orf54-205ENST00000596809 SHANK3Q9BYB0 1731 aa29.52■■■□□ 2.32
C19orf54-205ENST00000596809 ANKRD26Q9UPS8 1709 aa29.52■■■□□ 2.32
C19orf54-205ENST00000596809 NCAPD2Q15021 1401 aa29.52■■■□□ 2.32
C19orf54-205ENST00000596809 MAP2P11137 1827 aaKnown RBP29.52■■■□□ 2.32
C19orf54-205ENST00000596809 CYP27B1O15528 508 aa29.51■■■□□ 2.31
C19orf54-205ENST00000596809 EIF4A2Q14240 407 aaKnown RBP29.51■■■□□ 2.31
C19orf54-205ENST00000596809 KAT6BQ8WYB5 2073 aa29.5■■■□□ 2.31
C19orf54-205ENST00000596809 SLC27A3Q5K4L6 730 aa29.5■■■□□ 2.31
C19orf54-205ENST00000596809 SPG7Q9UQ90 795 aa29.47■■■□□ 2.31
C19orf54-205ENST00000596809 DOT1LQ8TEK3 1739 aa29.46■■■□□ 2.31
C19orf54-205ENST00000596809 ZBTB7AO95365 584 aa29.46■■■□□ 2.31
C19orf54-205ENST00000596809 PPP1R1BQ9UD71 204 aaPredicted RBP29.46■■■□□ 2.31
C19orf54-205ENST00000596809 AMER1Q5JTC6 1135 aaPredicted RBP29.45■■■□□ 2.31
C19orf54-205ENST00000596809 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.45■■■□□ 2.31
C19orf54-205ENST00000596809 KCNQ4P56696 695 aa29.44■■■□□ 2.3
C19orf54-205ENST00000596809 ZNF827Q17R98 1081 aa29.44■■■□□ 2.3
C19orf54-205ENST00000596809 AKT1S1Q96B36 256 aa29.43■■■□□ 2.3
C19orf54-205ENST00000596809 CASZ1Q86V15 1759 aa29.43■■■□□ 2.3
C19orf54-205ENST00000596809 NKX1-1Q15270 411 aaPredicted RBP29.42■■■□□ 2.3
C19orf54-205ENST00000596809 ATF5Q9Y2D1 282 aaPredicted RBP29.42■■■□□ 2.3
C19orf54-205ENST00000596809 PAPPAQ13219 1627 aa29.42■■■□□ 2.3
C19orf54-205ENST00000596809 MPRIPQ6WCQ1 1025 aa29.41■■■□□ 2.3
C19orf54-205ENST00000596809 PER1O15534 1290 aaPredicted RBP29.4■■■□□ 2.3
C19orf54-205ENST00000596809 CCNL1Q9UK58 526 aaPredicted RBP29.4■■■□□ 2.3
C19orf54-205ENST00000596809 IGSF1Q8N6C5 1336 aa29.4■■■□□ 2.3
C19orf54-205ENST00000596809 MTFR1LQ9H019 292 aa29.39■■■□□ 2.3
C19orf54-205ENST00000596809 PTGER2P43116 358 aa29.38■■■□□ 2.29
C19orf54-205ENST00000596809 PKD1L3Q7Z443 1732 aa29.37■■■□□ 2.29
C19orf54-205ENST00000596809 IFNL2Q8IZJ0 200 aa29.37■■■□□ 2.29
C19orf54-205ENST00000596809 PHKG2P15735 406 aa29.35■■■□□ 2.29
C19orf54-205ENST00000596809 PIGBQ92521 554 aa29.34■■■□□ 2.29
C19orf54-205ENST00000596809 TFCP2L1Q9NZI6 479 aa29.34■■■□□ 2.29
C19orf54-205ENST00000596809 PALLDQ8WX93 1383 aa29.32■■■□□ 2.28
C19orf54-205ENST00000596809 PLEKHG2Q9H7P9 1386 aa29.32■■■□□ 2.28
C19orf54-205ENST00000596809 CC2D1BQ5T0F9 858 aaKnown RBP29.32■■■□□ 2.28
C19orf54-205ENST00000596809 SMARCC1Q92922 1105 aaPredicted RBP29.32■■■□□ 2.28
C19orf54-205ENST00000596809 LY75O60449 1722 aa29.31■■■□□ 2.28
C19orf54-205ENST00000596809 PNPLA7Q6ZV29 1317 aa29.31■■■□□ 2.28
C19orf54-205ENST00000596809 SGIP1Q9BQI5 828 aa29.31■■■□□ 2.28
C19orf54-205ENST00000596809 IL13P35225 146 aa29.3■■■□□ 2.28
C19orf54-205ENST00000596809 PLEKHO1Q53GL0 409 aaPredicted RBP29.3■■■□□ 2.28
C19orf54-205ENST00000596809 MTHFSP49914 203 aa29.29■■■□□ 2.28
C19orf54-205ENST00000596809 AEBP1Q8IUX7 1158 aa29.29■■■□□ 2.28
C19orf54-205ENST00000596809 SLC16A10Q8TF71 515 aa29.29■■■□□ 2.28
C19orf54-205ENST00000596809 TMOD3Q9NYL9 352 aa29.28■■■□□ 2.28
C19orf54-205ENST00000596809 TOGARAM1Q9Y4F4 1720 aa29.28■■■□□ 2.28
C19orf54-205ENST00000596809 HMGB2P26583 209 aaKnown RBP29.27■■■□□ 2.28
C19orf54-205ENST00000596809 AMOTQ4VCS5 1084 aa29.27■■■□□ 2.28
C19orf54-205ENST00000596809 SULT6B1Q6IMI4 303 aa29.27■■■□□ 2.28
C19orf54-205ENST00000596809 HSP90AB1P08238 724 aaKnown RBP29.23■■■□□ 2.27
C19orf54-205ENST00000596809 ZNF530Q6P9A1 599 aaPredicted RBP29.23■■■□□ 2.27
C19orf54-205ENST00000596809 ARXQ96QS3 562 aa29.23■■■□□ 2.27
C19orf54-205ENST00000596809 ASAP1Q9ULH1 1129 aa29.23■■■□□ 2.27
C19orf54-205ENST00000596809 NPC1L1Q9UHC9 1359 aa29.23■■■□□ 2.27
C19orf54-205ENST00000596809 CNGB1Q14028 1251 aaPredicted RBP29.22■■■□□ 2.27
C19orf54-205ENST00000596809 DCAF5Q96JK2 942 aa29.22■■■□□ 2.27
C19orf54-205ENST00000596809 FHDC1Q9C0D6 1143 aaPredicted RBP29.22■■■□□ 2.27
C19orf54-205ENST00000596809 ITGB4P16144 1822 aa29.22■■■□□ 2.27
C19orf54-205ENST00000596809 KDRP35968 1356 aa29.21■■■□□ 2.27
C19orf54-205ENST00000596809 ERVV-2B6SEH9 535 aa29.2■■■□□ 2.26
C19orf54-205ENST00000596809 COL23A1Q86Y22 540 aaPredicted RBP29.2■■■□□ 2.26
C19orf54-205ENST00000596809 SYT17Q9BSW7 474 aa29.2■■■□□ 2.26
C19orf54-205ENST00000596809 LOC102724428A0A0B4J2F2 783 aa29.19■■■□□ 2.26
C19orf54-205ENST00000596809 DCAF8L1A6NGE4 600 aa29.19■■■□□ 2.26
C19orf54-205ENST00000596809 MSH5O43196 834 aa29.19■■■□□ 2.26
C19orf54-205ENST00000596809 SIK1P57059 783 aa29.19■■■□□ 2.26
C19orf54-205ENST00000596809 ATG3Q9NT62 314 aa29.19■■■□□ 2.26
C19orf54-205ENST00000596809 QSER1Q2KHR3 1735 aa29.18■■■□□ 2.26
C19orf54-205ENST00000596809 C1orf141Q5JVX7 400 aa29.18■■■□□ 2.26
C19orf54-205ENST00000596809 POLD1P28340 1107 aa29.17■■■□□ 2.26
C19orf54-205ENST00000596809 DIAPH1O60610 1272 aaKnown RBP29.16■■■□□ 2.26
C19orf54-205ENST00000596809 FLAD1Q8NFF5 587 aa29.15■■■□□ 2.26
C19orf54-205ENST00000596809 HMOX1P09601 288 aa29.14■■■□□ 2.26
C19orf54-205ENST00000596809 CABP4P57796 275 aa29.14■■■□□ 2.26
C19orf54-205ENST00000596809 AK7Q96M32 723 aa29.14■■■□□ 2.26
C19orf54-205ENST00000596809 KDM6AO15550 1401 aaPredicted RBP29.13■■■□□ 2.25
C19orf54-205ENST00000596809 C5P01031 1676 aa29.13■■■□□ 2.25
C19orf54-205ENST00000596809 ATP6V1AP38606 617 aa29.13■■■□□ 2.25
C19orf54-205ENST00000596809 TUBGCP6Q96RT7 1819 aa29.13■■■□□ 2.25
C19orf54-205ENST00000596809 ITPK1Q13572 414 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 220.8 ms