RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 PPM1GO15355 546 aaPredicted RBP22.04■■□□□ 1.12
IRF3-210ENST00000595240 ZCRB1Q8TBF4 217 aaKnown RBP22.04■■□□□ 1.12
IRF3-210ENST00000595240 RAPGEF4Q8WZA2 1011 aa22.03■■□□□ 1.12
IRF3-210ENST00000595240 LRP5O75197 1615 aa22.02■■□□□ 1.12
IRF3-210ENST00000595240 NCAPD2Q15021 1401 aa22.01■■□□□ 1.11
IRF3-210ENST00000595240 TNNT2P45379 298 aaPredicted RBP22.01■■□□□ 1.11
IRF3-210ENST00000595240 TXNRD1Q16881 649 aa22■■□□□ 1.11
IRF3-210ENST00000595240 TATP17735 454 aaPredicted RBP21.99■■□□□ 1.11
IRF3-210ENST00000595240 ANO8Q9HCE9 1232 aaPredicted RBP21.99■■□□□ 1.11
IRF3-210ENST00000595240 KNSTRNQ9Y448 316 aa21.98■■□□□ 1.11
IRF3-210ENST00000595240 SHANK3Q9BYB0 1731 aa21.97■■□□□ 1.11
IRF3-210ENST00000595240 EYA1Q99502 592 aa21.96■■□□□ 1.11
IRF3-210ENST00000595240 MAP2P11137 1827 aaKnown RBP21.95■■□□□ 1.1
IRF3-210ENST00000595240 AMER1Q5JTC6 1135 aaPredicted RBP21.95■■□□□ 1.1
IRF3-210ENST00000595240 MORC1Q86VD1 984 aa21.95■■□□□ 1.1
IRF3-210ENST00000595240 PRIM1P49642 420 aaKnown RBP21.94■■□□□ 1.1
IRF3-210ENST00000595240 EIF4A2Q14240 407 aaKnown RBP21.94■■□□□ 1.1
IRF3-210ENST00000595240 PCDH11XQ9BZA7 1347 aa21.94■■□□□ 1.1
IRF3-210ENST00000595240 PCDH11YQ9BZA8 1340 aa21.94■■□□□ 1.1
IRF3-210ENST00000595240 BTAF1O14981 1849 aa21.94■■□□□ 1.1
IRF3-210ENST00000595240 CYP27B1O15528 508 aa21.91■■□□□ 1.1
IRF3-210ENST00000595240 PER1O15534 1290 aaPredicted RBP21.91■■□□□ 1.1
IRF3-210ENST00000595240 SYTL4Q96C24 671 aaPredicted RBP21.91■■□□□ 1.1
IRF3-210ENST00000595240 DOT1LQ8TEK3 1739 aa21.9■■□□□ 1.1
IRF3-210ENST00000595240 STK32BQ9NY57 414 aa21.9■■□□□ 1.1
IRF3-210ENST00000595240 SLC15A2Q16348 729 aa21.89■■□□□ 1.09
IRF3-210ENST00000595240 LRRC4BQ9NT99 713 aa21.89■■□□□ 1.09
IRF3-210ENST00000595240 IGSF1Q8N6C5 1336 aa21.88■■□□□ 1.09
IRF3-210ENST00000595240 SLC27A3Q5K4L6 730 aa21.88■■□□□ 1.09
IRF3-210ENST00000595240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.88■■□□□ 1.09
IRF3-210ENST00000595240 PKD1L3Q7Z443 1732 aa21.88■■□□□ 1.09
IRF3-210ENST00000595240 SPG7Q9UQ90 795 aa21.87■■□□□ 1.09
IRF3-210ENST00000595240 PAPPAQ13219 1627 aa21.87■■□□□ 1.09
IRF3-210ENST00000595240 KAT6BQ8WYB5 2073 aa21.86■■□□□ 1.09
IRF3-210ENST00000595240 PDGFDQ9GZP0 370 aaPredicted RBP21.86■■□□□ 1.09
IRF3-210ENST00000595240 PLEKHG2Q9H7P9 1386 aa21.86■■□□□ 1.09
IRF3-210ENST00000595240 NKX1-1Q15270 411 aaPredicted RBP21.85■■□□□ 1.09
IRF3-210ENST00000595240 SPON1Q9HCB6 807 aa21.85■■□□□ 1.09
IRF3-210ENST00000595240 CASZ1Q86V15 1759 aa21.84■■□□□ 1.09
IRF3-210ENST00000595240 ZNF827Q17R98 1081 aa21.82■■□□□ 1.08
IRF3-210ENST00000595240 NPC1L1Q9UHC9 1359 aa21.82■■□□□ 1.08
IRF3-210ENST00000595240 AKT1S1Q96B36 256 aa21.81■■□□□ 1.08
IRF3-210ENST00000595240 PHKG2P15735 406 aa21.8■■□□□ 1.08
IRF3-210ENST00000595240 IL13P35225 146 aa21.8■■□□□ 1.08
IRF3-210ENST00000595240 KCNQ4P56696 695 aa21.8■■□□□ 1.08
IRF3-210ENST00000595240 CC2D1BQ5T0F9 858 aaKnown RBP21.8■■□□□ 1.08
IRF3-210ENST00000595240 ZBTB7AO95365 584 aa21.79■■□□□ 1.08
IRF3-210ENST00000595240 MTHFSP49914 203 aa21.79■■□□□ 1.08
IRF3-210ENST00000595240 MPRIPQ6WCQ1 1025 aa21.79■■□□□ 1.08
IRF3-210ENST00000595240 IFNL2Q8IZJ0 200 aa21.79■■□□□ 1.08
IRF3-210ENST00000595240 LY75O60449 1722 aa21.78■■□□□ 1.08
IRF3-210ENST00000595240 TOGARAM1Q9Y4F4 1720 aa21.78■■□□□ 1.08
IRF3-210ENST00000595240 AEBP1Q8IUX7 1158 aa21.78■■□□□ 1.08
IRF3-210ENST00000595240 CCNL1Q9UK58 526 aaPredicted RBP21.78■■□□□ 1.08
IRF3-210ENST00000595240 PIGBQ92521 554 aa21.77■■□□□ 1.08
IRF3-210ENST00000595240 KDRP35968 1356 aa21.76■■□□□ 1.07
IRF3-210ENST00000595240 PALLDQ8WX93 1383 aa21.76■■□□□ 1.07
IRF3-210ENST00000595240 PTGER2P43116 358 aa21.75■■□□□ 1.07
IRF3-210ENST00000595240 PLEKHO1Q53GL0 409 aaPredicted RBP21.75■■□□□ 1.07
IRF3-210ENST00000595240 SULT6B1Q6IMI4 303 aa21.75■■□□□ 1.07
IRF3-210ENST00000595240 MTFR1LQ9H019 292 aa21.75■■□□□ 1.07
IRF3-210ENST00000595240 AMOTQ4VCS5 1084 aa21.74■■□□□ 1.07
IRF3-210ENST00000595240 SMARCC1Q92922 1105 aaPredicted RBP21.74■■□□□ 1.07
IRF3-210ENST00000595240 PPP1R1BQ9UD71 204 aaPredicted RBP21.74■■□□□ 1.07
IRF3-210ENST00000595240 ATF5Q9Y2D1 282 aaPredicted RBP21.73■■□□□ 1.07
IRF3-210ENST00000595240 TMOD3Q9NYL9 352 aa21.72■■□□□ 1.07
IRF3-210ENST00000595240 TFCP2L1Q9NZI6 479 aa21.72■■□□□ 1.07
IRF3-210ENST00000595240 PNPLA7Q6ZV29 1317 aa21.72■■□□□ 1.07
IRF3-210ENST00000595240 ITGB4P16144 1822 aa21.71■■□□□ 1.07
IRF3-210ENST00000595240 ZNF530Q6P9A1 599 aaPredicted RBP21.71■■□□□ 1.07
IRF3-210ENST00000595240 SGIP1Q9BQI5 828 aa21.71■■□□□ 1.07
IRF3-210ENST00000595240 HSP90AB1P08238 724 aaKnown RBP21.7■■□□□ 1.06
IRF3-210ENST00000595240 DCAF5Q96JK2 942 aa21.7■■□□□ 1.06
IRF3-210ENST00000595240 HMGB2P26583 209 aaKnown RBP21.69■■□□□ 1.06
IRF3-210ENST00000595240 CNGB1Q14028 1251 aaPredicted RBP21.69■■□□□ 1.06
IRF3-210ENST00000595240 ERVV-2B6SEH9 535 aa21.68■■□□□ 1.06
IRF3-210ENST00000595240 DIAPH1O60610 1272 aaKnown RBP21.68■■□□□ 1.06
IRF3-210ENST00000595240 SLC16A10Q8TF71 515 aa21.68■■□□□ 1.06
IRF3-210ENST00000595240 ASAP1Q9ULH1 1129 aa21.68■■□□□ 1.06
IRF3-210ENST00000595240 KDM6AO15550 1401 aaPredicted RBP21.68■■□□□ 1.06
IRF3-210ENST00000595240 QSER1Q2KHR3 1735 aa21.68■■□□□ 1.06
IRF3-210ENST00000595240 COL3A1P02461 1466 aaPredicted RBP21.66■■□□□ 1.06
IRF3-210ENST00000595240 LOC102724428A0A0B4J2F2 783 aa21.66■■□□□ 1.06
IRF3-210ENST00000595240 SIK1P57059 783 aa21.66■■□□□ 1.06
IRF3-210ENST00000595240 C1orf141Q5JVX7 400 aa21.66■■□□□ 1.06
IRF3-210ENST00000595240 ATG3Q9NT62 314 aa21.66■■□□□ 1.06
IRF3-210ENST00000595240 C5P01031 1676 aa21.65■■□□□ 1.06
IRF3-210ENST00000595240 HMOX1P09601 288 aa21.64■■□□□ 1.05
IRF3-210ENST00000595240 TUBGCP6Q96RT7 1819 aa21.64■■□□□ 1.05
IRF3-210ENST00000595240 COL23A1Q86Y22 540 aaPredicted RBP21.63■■□□□ 1.05
IRF3-210ENST00000595240 ARXQ96QS3 562 aa21.62■■□□□ 1.05
IRF3-210ENST00000595240 CABP4P57796 275 aa21.61■■□□□ 1.05
IRF3-210ENST00000595240 AKAP4Q5JQC9 854 aa21.61■■□□□ 1.05
IRF3-210ENST00000595240 TAF1LQ8IZX4 1826 aa21.6■■□□□ 1.05
IRF3-210ENST00000595240 ITPK1Q13572 414 aa21.6■■□□□ 1.05
IRF3-210ENST00000595240 LINC00116Q8NCU8 138 aa21.6■■□□□ 1.05
IRF3-210ENST00000595240 FHDC1Q9C0D6 1143 aaPredicted RBP21.6■■□□□ 1.05
IRF3-210ENST00000595240 C4BP0C0L5 1744 aa21.6■■□□□ 1.05
IRF3-210ENST00000595240 FLAD1Q8NFF5 587 aa21.59■■□□□ 1.05
IRF3-210ENST00000595240 AK7Q96M32 723 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms