RNA–Protein interactions for RNA: ENST00000594044.1

ARHGEF1-206, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 834 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-206ENST00000594044 DDX54Q8TDD1 881 aaKnown RBP18.69■□□□□ 0.58
ARHGEF1-206ENST00000594044 EMILIN1Q9Y6C2 1016 aa18.68■□□□□ 0.58
ARHGEF1-206ENST00000594044 SLC15A2Q16348 729 aa18.66■□□□□ 0.58
ARHGEF1-206ENST00000594044 USHBP1Q8N6Y0 703 aa18.66■□□□□ 0.58
ARHGEF1-206ENST00000594044 SPON1Q9HCB6 807 aa18.66■□□□□ 0.58
ARHGEF1-206ENST00000594044 WASHC2AQ641Q2 1341 aa18.66■□□□□ 0.58
ARHGEF1-206ENST00000594044 PAPPAQ13219 1627 aa18.66■□□□□ 0.58
ARHGEF1-206ENST00000594044 NCAPD2Q15021 1401 aa18.66■□□□□ 0.58
ARHGEF1-206ENST00000594044 DOT1LQ8TEK3 1739 aa18.65■□□□□ 0.58
ARHGEF1-206ENST00000594044 RAPGEF4Q8WZA2 1011 aa18.64■□□□□ 0.57
ARHGEF1-206ENST00000594044 STK32BQ9NY57 414 aa18.64■□□□□ 0.57
ARHGEF1-206ENST00000594044 POLKQ9UBT6 870 aa18.64■□□□□ 0.57
ARHGEF1-206ENST00000594044 TATP17735 454 aaPredicted RBP18.63■□□□□ 0.57
ARHGEF1-206ENST00000594044 PRIM1P49642 420 aaKnown RBP18.63■□□□□ 0.57
ARHGEF1-206ENST00000594044 POLR3GLQ9BT43 218 aa18.63■□□□□ 0.57
ARHGEF1-206ENST00000594044 PDGFDQ9GZP0 370 aaPredicted RBP18.63■□□□□ 0.57
ARHGEF1-206ENST00000594044 PANK3Q9H999 370 aa18.63■□□□□ 0.57
ARHGEF1-206ENST00000594044 NSD2O96028 1365 aa18.63■□□□□ 0.57
ARHGEF1-206ENST00000594044 LRRC4BQ9NT99 713 aa18.62■□□□□ 0.57
ARHGEF1-206ENST00000594044 LY75O60449 1722 aa18.62■□□□□ 0.57
ARHGEF1-206ENST00000594044 SLC27A3Q5K4L6 730 aa18.61■□□□□ 0.57
ARHGEF1-206ENST00000594044 PKD1L3Q7Z443 1732 aa18.6■□□□□ 0.57
ARHGEF1-206ENST00000594044 PPM1GO15355 546 aaPredicted RBP18.59■□□□□ 0.57
ARHGEF1-206ENST00000594044 QSER1Q2KHR3 1735 aa18.59■□□□□ 0.57
ARHGEF1-206ENST00000594044 PCDH11XQ9BZA7 1347 aa18.58■□□□□ 0.57
ARHGEF1-206ENST00000594044 PCDH11YQ9BZA8 1340 aa18.58■□□□□ 0.57
ARHGEF1-206ENST00000594044 CYP27B1O15528 508 aa18.58■□□□□ 0.56
ARHGEF1-206ENST00000594044 EYA1Q99502 592 aa18.58■□□□□ 0.56
ARHGEF1-206ENST00000594044 PTGER2P43116 358 aa18.57■□□□□ 0.56
ARHGEF1-206ENST00000594044 ZNF827Q17R98 1081 aa18.57■□□□□ 0.56
ARHGEF1-206ENST00000594044 AKT1S1Q96B36 256 aa18.57■□□□□ 0.56
ARHGEF1-206ENST00000594044 SYTL4Q96C24 671 aaPredicted RBP18.57■□□□□ 0.56
ARHGEF1-206ENST00000594044 ITGB4P16144 1822 aa18.56■□□□□ 0.56
ARHGEF1-206ENST00000594044 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.56■□□□□ 0.56
ARHGEF1-206ENST00000594044 ZBTB7AO95365 584 aa18.55■□□□□ 0.56
ARHGEF1-206ENST00000594044 NKX1-1Q15270 411 aaPredicted RBP18.55■□□□□ 0.56
ARHGEF1-206ENST00000594044 PPP1R1BQ9UD71 204 aaPredicted RBP18.55■□□□□ 0.56
ARHGEF1-206ENST00000594044 TNNT2P45379 298 aaPredicted RBP18.54■□□□□ 0.56
ARHGEF1-206ENST00000594044 EIF4A2Q14240 407 aaKnown RBP18.54■□□□□ 0.56
ARHGEF1-206ENST00000594044 SGIP1Q9BQI5 828 aa18.54■□□□□ 0.56
ARHGEF1-206ENST00000594044 MTFR1LQ9H019 292 aa18.54■□□□□ 0.56
ARHGEF1-206ENST00000594044 TOGARAM1Q9Y4F4 1720 aa18.54■□□□□ 0.56
ARHGEF1-206ENST00000594044 PLEKHG2Q9H7P9 1386 aa18.54■□□□□ 0.56
ARHGEF1-206ENST00000594044 ATF5Q9Y2D1 282 aaPredicted RBP18.53■□□□□ 0.56
ARHGEF1-206ENST00000594044 TUBGCP6Q96RT7 1819 aa18.53■□□□□ 0.56
ARHGEF1-206ENST00000594044 KIF7Q2M1P5 1343 aa18.52■□□□□ 0.56
ARHGEF1-206ENST00000594044 SPG7Q9UQ90 795 aa18.52■□□□□ 0.56
ARHGEF1-206ENST00000594044 KNSTRNQ9Y448 316 aa18.52■□□□□ 0.56
ARHGEF1-206ENST00000594044 COL24A1Q17RW2 1714 aa18.52■□□□□ 0.55
ARHGEF1-206ENST00000594044 IGSF1Q8N6C5 1336 aa18.5■□□□□ 0.55
ARHGEF1-206ENST00000594044 KCNQ4P56696 695 aa18.5■□□□□ 0.55
ARHGEF1-206ENST00000594044 AMER1Q5JTC6 1135 aaPredicted RBP18.5■□□□□ 0.55
ARHGEF1-206ENST00000594044 MORC1Q86VD1 984 aa18.5■□□□□ 0.55
ARHGEF1-206ENST00000594044 SLC16A10Q8TF71 515 aa18.5■□□□□ 0.55
ARHGEF1-206ENST00000594044 CCNL1Q9UK58 526 aaPredicted RBP18.5■□□□□ 0.55
ARHGEF1-206ENST00000594044 TAF1LQ8IZX4 1826 aa18.5■□□□□ 0.55
ARHGEF1-206ENST00000594044 PNPLA7Q6ZV29 1317 aa18.49■□□□□ 0.55
ARHGEF1-206ENST00000594044 PER1O15534 1290 aaPredicted RBP18.48■□□□□ 0.55
ARHGEF1-206ENST00000594044 MPRIPQ6WCQ1 1025 aa18.48■□□□□ 0.55
ARHGEF1-206ENST00000594044 HMGB2P26583 209 aaKnown RBP18.47■□□□□ 0.55
ARHGEF1-206ENST00000594044 C5P01031 1676 aa18.47■□□□□ 0.55
ARHGEF1-206ENST00000594044 PHKG2P15735 406 aa18.46■□□□□ 0.55
ARHGEF1-206ENST00000594044 IFNL2Q8IZJ0 200 aa18.46■□□□□ 0.55
ARHGEF1-206ENST00000594044 PIGBQ92521 554 aa18.46■□□□□ 0.55
ARHGEF1-206ENST00000594044 SMARCC1Q92922 1105 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF1-206ENST00000594044 TFCP2L1Q9NZI6 479 aa18.46■□□□□ 0.55
ARHGEF1-206ENST00000594044 PALLDQ8WX93 1383 aa18.45■□□□□ 0.54
ARHGEF1-206ENST00000594044 SYT17Q9BSW7 474 aa18.44■□□□□ 0.54
ARHGEF1-206ENST00000594044 MAP3K5Q99683 1374 aa18.43■□□□□ 0.54
ARHGEF1-206ENST00000594044 ARXQ96QS3 562 aa18.43■□□□□ 0.54
ARHGEF1-206ENST00000594044 FHDC1Q9C0D6 1143 aaPredicted RBP18.43■□□□□ 0.54
ARHGEF1-206ENST00000594044 IL13P35225 146 aa18.41■□□□□ 0.54
ARHGEF1-206ENST00000594044 PLEKHO1Q53GL0 409 aaPredicted RBP18.41■□□□□ 0.54
ARHGEF1-206ENST00000594044 KDRP35968 1356 aa18.41■□□□□ 0.54
ARHGEF1-206ENST00000594044 AMOTQ4VCS5 1084 aa18.4■□□□□ 0.54
ARHGEF1-206ENST00000594044 COL23A1Q86Y22 540 aaPredicted RBP18.4■□□□□ 0.54
ARHGEF1-206ENST00000594044 TMOD3Q9NYL9 352 aa18.4■□□□□ 0.54
ARHGEF1-206ENST00000594044 NPC1L1Q9UHC9 1359 aa18.4■□□□□ 0.54
ARHGEF1-206ENST00000594044 C4BP0C0L5 1744 aa18.4■□□□□ 0.54
ARHGEF1-206ENST00000594044 DCAF8L1A6NGE4 600 aa18.39■□□□□ 0.53
ARHGEF1-206ENST00000594044 ERVV-2B6SEH9 535 aa18.39■□□□□ 0.53
ARHGEF1-206ENST00000594044 AEBP1Q8IUX7 1158 aa18.39■□□□□ 0.53
ARHGEF1-206ENST00000594044 UBR3Q6ZT12 1888 aa18.39■□□□□ 0.53
ARHGEF1-206ENST00000594044 HSP90AB1P08238 724 aaKnown RBP18.38■□□□□ 0.53
ARHGEF1-206ENST00000594044 FLAD1Q8NFF5 587 aa18.38■□□□□ 0.53
ARHGEF1-206ENST00000594044 DCAF5Q96JK2 942 aa18.38■□□□□ 0.53
ARHGEF1-206ENST00000594044 ASAP1Q9ULH1 1129 aa18.38■□□□□ 0.53
ARHGEF1-206ENST00000594044 UTRNP46939 3433 aa18.38■□□□□ 0.53
ARHGEF1-206ENST00000594044 LOC102724428A0A0B4J2F2 783 aa18.37■□□□□ 0.53
ARHGEF1-206ENST00000594044 POLD1P28340 1107 aa18.37■□□□□ 0.53
ARHGEF1-206ENST00000594044 MTHFSP49914 203 aa18.37■□□□□ 0.53
ARHGEF1-206ENST00000594044 SIK1P57059 783 aa18.37■□□□□ 0.53
ARHGEF1-206ENST00000594044 ATG3Q9NT62 314 aa18.37■□□□□ 0.53
ARHGEF1-206ENST00000594044 ZNF831Q5JPB2 1677 aa18.36■□□□□ 0.53
ARHGEF1-206ENST00000594044 SULT6B1Q6IMI4 303 aa18.36■□□□□ 0.53
ARHGEF1-206ENST00000594044 KDM6AO15550 1401 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF1-206ENST00000594044 ZNF530Q6P9A1 599 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF1-206ENST00000594044 CC2D1BQ5T0F9 858 aaKnown RBP18.34■□□□□ 0.53
ARHGEF1-206ENST00000594044 LINC00116Q8NCU8 138 aa18.34■□□□□ 0.53
ARHGEF1-206ENST00000594044 SCN11AQ9UI33 1791 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 467 ms