RNA–Protein interactions for RNA: ENST00000592632.5

DDX39A-218, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-218ENST00000592632 DDX54Q8TDD1 881 aaKnown RBP17.62■□□□□ 0.41
DDX39A-218ENST00000592632 BCL9O00512 1426 aa17.62■□□□□ 0.41
DDX39A-218ENST00000592632 RGPD1P0DJD0 1748 aa17.61■□□□□ 0.41
DDX39A-218ENST00000592632 SBF2Q86WG5 1849 aa17.61■□□□□ 0.41
DDX39A-218ENST00000592632 IGSF1Q8N6C5 1336 aa17.6■□□□□ 0.41
DDX39A-218ENST00000592632 APBA3O96018 575 aa17.59■□□□□ 0.41
DDX39A-218ENST00000592632 KCNQ2O43526 872 aa17.58■□□□□ 0.4
DDX39A-218ENST00000592632 PPP2R1AP30153 589 aa17.58■□□□□ 0.4
DDX39A-218ENST00000592632 BCL11BQ9C0K0 894 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-218ENST00000592632 LRP5O75197 1615 aa17.58■□□□□ 0.4
DDX39A-218ENST00000592632 CAMKK2Q96RR4 588 aa17.57■□□□□ 0.4
DDX39A-218ENST00000592632 TNS1Q9HBL0 1735 aaKnown RBP17.57■□□□□ 0.4
DDX39A-218ENST00000592632 R3HDM1Q15032 1099 aaKnown RBP17.56■□□□□ 0.4
DDX39A-218ENST00000592632 EZH2Q15910 746 aaKnown RBP17.56■□□□□ 0.4
DDX39A-218ENST00000592632 AEBP1Q8IUX7 1158 aa17.56■□□□□ 0.4
DDX39A-218ENST00000592632 ACSBG1Q96GR2 724 aa17.56■□□□□ 0.4
DDX39A-218ENST00000592632 SHANK3Q9BYB0 1731 aa17.55■□□□□ 0.4
DDX39A-218ENST00000592632 CYP27B1O15528 508 aa17.55■□□□□ 0.4
DDX39A-218ENST00000592632 DIAPH1O60610 1272 aaKnown RBP17.55■□□□□ 0.4
DDX39A-218ENST00000592632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.55■□□□□ 0.4
DDX39A-218ENST00000592632 SULT6B1Q6IMI4 303 aa17.54■□□□□ 0.4
DDX39A-218ENST00000592632 SPG7Q9UQ90 795 aa17.53■□□□□ 0.4
DDX39A-218ENST00000592632 PARD3Q8TEW0 1356 aa17.53■□□□□ 0.4
DDX39A-218ENST00000592632 COL3A1P02461 1466 aaPredicted RBP17.52■□□□□ 0.4
DDX39A-218ENST00000592632 ZNF316A6NFI3 1004 aaPredicted RBP17.52■□□□□ 0.4
DDX39A-218ENST00000592632 PLSCR1O15162 318 aa17.52■□□□□ 0.4
DDX39A-218ENST00000592632 KDRP35968 1356 aa17.52■□□□□ 0.39
DDX39A-218ENST00000592632 PCDH11XQ9BZA7 1347 aa17.51■□□□□ 0.39
DDX39A-218ENST00000592632 PCDH11YQ9BZA8 1340 aa17.51■□□□□ 0.39
DDX39A-218ENST00000592632 PRIM1P49642 420 aaKnown RBP17.51■□□□□ 0.39
DDX39A-218ENST00000592632 PKD1L3Q7Z443 1732 aa17.5■□□□□ 0.39
DDX39A-218ENST00000592632 HMOX1P09601 288 aa17.5■□□□□ 0.39
DDX39A-218ENST00000592632 NKX1-1Q15270 411 aaPredicted RBP17.5■□□□□ 0.39
DDX39A-218ENST00000592632 PLEKHO1Q53GL0 409 aaPredicted RBP17.5■□□□□ 0.39
DDX39A-218ENST00000592632 PROM2Q8N271 834 aa17.5■□□□□ 0.39
DDX39A-218ENST00000592632 RALBP1Q15311 655 aa17.49■□□□□ 0.39
DDX39A-218ENST00000592632 CFAP53Q96M91 514 aa17.49■□□□□ 0.39
DDX39A-218ENST00000592632 PLEKHG2Q9H7P9 1386 aa17.49■□□□□ 0.39
DDX39A-218ENST00000592632 PHKG2P15735 406 aa17.48■□□□□ 0.39
DDX39A-218ENST00000592632 IFNL2Q8IZJ0 200 aa17.48■□□□□ 0.39
DDX39A-218ENST00000592632 NHSQ6T4R5 1651 aa17.48■□□□□ 0.39
DDX39A-218ENST00000592632 AMOTQ4VCS5 1084 aa17.47■□□□□ 0.39
DDX39A-218ENST00000592632 U2SURPO15042 1029 aaKnown RBP17.46■□□□□ 0.39
DDX39A-218ENST00000592632 SYTL4Q96C24 671 aaPredicted RBP17.46■□□□□ 0.39
DDX39A-218ENST00000592632 BTAF1O14981 1849 aa17.45■□□□□ 0.38
DDX39A-218ENST00000592632 ZNF530Q6P9A1 599 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-218ENST00000592632 TXNRD1Q16881 649 aa17.44■□□□□ 0.38
DDX39A-218ENST00000592632 NBPF14Q5TI25 921 aa17.44■□□□□ 0.38
DDX39A-218ENST00000592632 NUDCQ9Y266 331 aa17.44■□□□□ 0.38
DDX39A-218ENST00000592632 DOT1LQ8TEK3 1739 aa17.44■□□□□ 0.38
DDX39A-218ENST00000592632 RREB1Q92766 1687 aa17.43■□□□□ 0.38
DDX39A-218ENST00000592632 MPRIPQ6WCQ1 1025 aa17.42■□□□□ 0.38
DDX39A-218ENST00000592632 RGPD3A6NKT7 1758 aaPredicted RBP17.41■□□□□ 0.38
DDX39A-218ENST00000592632 RGPD4Q7Z3J3 1758 aa17.41■□□□□ 0.38
DDX39A-218ENST00000592632 U2AF1L5P0DN76 240 aaPredicted RBP17.41■□□□□ 0.38
DDX39A-218ENST00000592632 U2AF1Q01081 240 aaKnown RBP eCLIP17.41■□□□□ 0.38
DDX39A-218ENST00000592632 MTHFSDQ2M296 383 aaKnown RBP17.41■□□□□ 0.38
DDX39A-218ENST00000592632 PIGBQ92521 554 aa17.41■□□□□ 0.38
DDX39A-218ENST00000592632 RSPH6AQ9H0K4 717 aa17.41■□□□□ 0.38
DDX39A-218ENST00000592632 PRKRIP1Q9H875 184 aaPredicted RBP17.41■□□□□ 0.38
DDX39A-218ENST00000592632 ITGB4P16144 1822 aa17.41■□□□□ 0.38
DDX39A-218ENST00000592632 NUP188Q5SRE5 1749 aa17.41■□□□□ 0.38
DDX39A-218ENST00000592632 TOGARAM1Q9Y4F4 1720 aa17.41■□□□□ 0.38
DDX39A-218ENST00000592632 HSP90AB1P08238 724 aaKnown RBP17.4■□□□□ 0.38
DDX39A-218ENST00000592632 DCAF5Q96JK2 942 aa17.4■□□□□ 0.38
DDX39A-218ENST00000592632 ERVV-2B6SEH9 535 aa17.39■□□□□ 0.37
DDX39A-218ENST00000592632 C1orf141Q5JVX7 400 aa17.39■□□□□ 0.37
DDX39A-218ENST00000592632 PHACTR3Q96KR7 559 aa17.39■□□□□ 0.37
DDX39A-218ENST00000592632 LRRC4BQ9NT99 713 aa17.39■□□□□ 0.37
DDX39A-218ENST00000592632 MYBBP1AQ9BQG0 1328 aaKnown RBP17.39■□□□□ 0.37
DDX39A-218ENST00000592632 FCHSD2O94868 740 aa17.38■□□□□ 0.37
DDX39A-218ENST00000592632 PRKAR2BP31323 418 aa17.38■□□□□ 0.37
DDX39A-218ENST00000592632 AKAP4Q5JQC9 854 aa17.38■□□□□ 0.37
DDX39A-218ENST00000592632 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
DDX39A-218ENST00000592632 LGR6Q9HBX8 967 aa17.37■□□□□ 0.37
DDX39A-218ENST00000592632 TMOD3Q9NYL9 352 aa17.37■□□□□ 0.37
DDX39A-218ENST00000592632 KCNQ4P56696 695 aa17.36■□□□□ 0.37
DDX39A-218ENST00000592632 SLC27A3Q5K4L6 730 aa17.36■□□□□ 0.37
DDX39A-218ENST00000592632 ANO8Q9HCE9 1232 aaPredicted RBP17.36■□□□□ 0.37
DDX39A-218ENST00000592632 ASAP1Q9ULH1 1129 aa17.35■□□□□ 0.37
DDX39A-218ENST00000592632 RNMTO43148 476 aaKnown RBP17.34■□□□□ 0.37
DDX39A-218ENST00000592632 CABP4P57796 275 aa17.34■□□□□ 0.37
DDX39A-218ENST00000592632 SMARCC1Q92922 1105 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-218ENST00000592632 ATG3Q9NT62 314 aa17.34■□□□□ 0.37
DDX39A-218ENST00000592632 PPP1R1BQ9UD71 204 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-218ENST00000592632 LY75O60449 1722 aa17.33■□□□□ 0.37
DDX39A-218ENST00000592632 NFATC2IPQ8NCF5 419 aa17.33■□□□□ 0.36
DDX39A-218ENST00000592632 GAS2L2Q8NHY3 880 aa17.33■□□□□ 0.36
DDX39A-218ENST00000592632 PALLDQ8WX93 1383 aa17.32■□□□□ 0.36
DDX39A-218ENST00000592632 SLC15A2Q16348 729 aa17.32■□□□□ 0.36
DDX39A-218ENST00000592632 PLEKHF1Q96S99 279 aa17.32■□□□□ 0.36
DDX39A-218ENST00000592632 SPON1Q9HCB6 807 aa17.32■□□□□ 0.36
DDX39A-218ENST00000592632 CCNL1Q9UK58 526 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-218ENST00000592632 SCN11AQ9UI33 1791 aa17.32■□□□□ 0.36
DDX39A-218ENST00000592632 IL17REQ8NFR9 667 aa17.31■□□□□ 0.36
DDX39A-218ENST00000592632 STK32BQ9NY57 414 aa17.31■□□□□ 0.36
DDX39A-218ENST00000592632 GNAT3A8MTJ3 354 aa17.3■□□□□ 0.36
DDX39A-218ENST00000592632 AKT1S1Q96B36 256 aa17.3■□□□□ 0.36
DDX39A-218ENST00000592632 SLC52A2Q9HAB3 445 aa17.3■□□□□ 0.36
DDX39A-218ENST00000592632 LOC102724428A0A0B4J2F2 783 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms