RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 GAS2L2Q8NHY3 880 aa24.91■■□□□ 1.58
MBD3-209ENST00000592012 RTF1Q92541 710 aaKnown RBP24.91■■□□□ 1.58
MBD3-209ENST00000592012 C14orf37Q86TY3 774 aa24.9■■□□□ 1.58
MBD3-209ENST00000592012 ESCO1Q5FWF5 840 aa24.9■■□□□ 1.58
MBD3-209ENST00000592012 NWD1Q149M9 1564 aa24.89■■□□□ 1.57
MBD3-209ENST00000592012 NBR1Q14596 966 aa24.88■■□□□ 1.57
MBD3-209ENST00000592012 MIS18AQ9NYP9 233 aa24.88■■□□□ 1.57
MBD3-209ENST00000592012 NUCB1Q02818 461 aa24.88■■□□□ 1.57
MBD3-209ENST00000592012 PSME1Q06323 249 aa24.88■■□□□ 1.57
MBD3-209ENST00000592012 HTATSF1O43719 755 aaKnown RBP24.87■■□□□ 1.57
MBD3-209ENST00000592012 C1orf115Q9H7X2 142 aa24.86■■□□□ 1.57
MBD3-209ENST00000592012 RTL1A6NKG5 1358 aa24.86■■□□□ 1.57
MBD3-209ENST00000592012 SLC4A3P48751 1232 aa24.85■■□□□ 1.57
MBD3-209ENST00000592012 LTV1Q96GA3 475 aaPredicted RBP24.85■■□□□ 1.57
MBD3-209ENST00000592012 TSPYL4Q9UJ04 414 aa24.85■■□□□ 1.57
MBD3-209ENST00000592012 INTS3Q68E01 1043 aaKnown RBP24.84■■□□□ 1.57
MBD3-209ENST00000592012 SIRT2Q8IXJ6 389 aa24.84■■□□□ 1.57
MBD3-209ENST00000592012 IP6K1Q92551 441 aa24.83■■□□□ 1.57
MBD3-209ENST00000592012 RGS12O14924 1447 aa24.83■■□□□ 1.57
MBD3-209ENST00000592012 LTN1O94822 1766 aa24.83■■□□□ 1.57
MBD3-209ENST00000592012 GNAT3A8MTJ3 354 aa24.83■■□□□ 1.57
MBD3-209ENST00000592012 GCC1Q96CN9 775 aa24.82■■□□□ 1.56
MBD3-209ENST00000592012 NFAT5O94916 1531 aa24.82■■□□□ 1.56
MBD3-209ENST00000592012 CHD1LQ86WJ1 897 aa24.82■■□□□ 1.56
MBD3-209ENST00000592012 DAXXQ9UER7 740 aaPredicted RBP24.81■■□□□ 1.56
MBD3-209ENST00000592012 PTPRCP08575 1304 aa24.81■■□□□ 1.56
MBD3-209ENST00000592012 ORAI2Q96SN7 254 aa24.81■■□□□ 1.56
MBD3-209ENST00000592012 LNPKQ9C0E8 428 aa24.8■■□□□ 1.56
MBD3-209ENST00000592012 SLC4A2P04920 1241 aa24.8■■□□□ 1.56
MBD3-209ENST00000592012 KCNH5Q8NCM2 988 aa24.8■■□□□ 1.56
MBD3-209ENST00000592012 IL17REQ8NFR9 667 aa24.78■■□□□ 1.56
MBD3-209ENST00000592012 UPF2Q9HAU5 1272 aaKnown RBP24.78■■□□□ 1.56
MBD3-209ENST00000592012 LRRC37A3O60309 1634 aa24.78■■□□□ 1.56
MBD3-209ENST00000592012 USHBP1Q8N6Y0 703 aa24.77■■□□□ 1.56
MBD3-209ENST00000592012 MAP3K5Q99683 1374 aa24.77■■□□□ 1.56
MBD3-209ENST00000592012 ANKRD45Q5TZF3 282 aa24.76■■□□□ 1.55
MBD3-209ENST00000592012 TBC1D32Q96NH3 1257 aa24.76■■□□□ 1.55
MBD3-209ENST00000592012 MSH6P52701 1360 aa24.76■■□□□ 1.55
MBD3-209ENST00000592012 NBPF6Q5VWK0 638 aa24.75■■□□□ 1.55
MBD3-209ENST00000592012 NBPF4Q96M43 638 aa24.75■■□□□ 1.55
MBD3-209ENST00000592012 PROSER2Q86WR7 435 aaPredicted RBP24.74■■□□□ 1.55
MBD3-209ENST00000592012 XPCQ01831 940 aaPredicted RBP24.73■■□□□ 1.55
MBD3-209ENST00000592012 G2E3Q7L622 706 aa24.73■■□□□ 1.55
MBD3-209ENST00000592012 BABAM1Q9NWV8 329 aa24.73■■□□□ 1.55
MBD3-209ENST00000592012 GCP02774 474 aa24.72■■□□□ 1.55
MBD3-209ENST00000592012 TAF7Q15545 349 aaPredicted RBP24.72■■□□□ 1.55
MBD3-209ENST00000592012 PHRF1Q9P1Y6 1649 aaKnown RBP24.72■■□□□ 1.55
MBD3-209ENST00000592012 DCTPP1Q9H773 170 aa24.7■■□□□ 1.54
MBD3-209ENST00000592012 ARHGEF25Q86VW2 580 aa24.69■■□□□ 1.54
MBD3-209ENST00000592012 C19orf44Q9H6X5 657 aa24.69■■□□□ 1.54
MBD3-209ENST00000592012 ZBTB7CA1YPR0 619 aa24.69■■□□□ 1.54
MBD3-209ENST00000592012 RTL5Q5HYW3 569 aaPredicted RBP24.69■■□□□ 1.54
MBD3-209ENST00000592012 ANKRD44Q8N8A2 993 aa24.69■■□□□ 1.54
MBD3-209ENST00000592012 ATP10DQ9P241 1426 aa24.69■■□□□ 1.54
MBD3-209ENST00000592012 RPAP2Q8IXW5 612 aaPredicted RBP24.68■■□□□ 1.54
MBD3-209ENST00000592012 BMP2KLQ5H9B9 411 aa24.68■■□□□ 1.54
MBD3-209ENST00000592012 MEIS3Q99687 375 aa24.67■■□□□ 1.54
MBD3-209ENST00000592012 STK31Q9BXU1 1019 aa24.67■■□□□ 1.54
MBD3-209ENST00000592012 SLIT3O75094 1523 aa24.67■■□□□ 1.54
MBD3-209ENST00000592012 SOS1Q07889 1333 aaPredicted RBP24.67■■□□□ 1.54
MBD3-209ENST00000592012 CEMIPQ8WUJ3 1361 aa24.67■■□□□ 1.54
MBD3-209ENST00000592012 CCDC30Q5VVM6 783 aa24.67■■□□□ 1.54
MBD3-209ENST00000592012 KRT28Q7Z3Y7 464 aa24.67■■□□□ 1.54
MBD3-209ENST00000592012 C1orf167Q5SNV9 1468 aa24.66■■□□□ 1.54
MBD3-209ENST00000592012 RGPD2P0DJD1 1756 aa24.66■■□□□ 1.54
MBD3-209ENST00000592012 CEP85Q6P2H3 762 aa24.66■■□□□ 1.54
MBD3-209ENST00000592012 LRRC59Q96AG4 307 aaKnown RBP24.66■■□□□ 1.54
MBD3-209ENST00000592012 USP35Q9P2H5 1018 aa24.66■■□□□ 1.54
MBD3-209ENST00000592012 F6X3S4 739 aa24.66■■□□□ 1.54
MBD3-209ENST00000592012 BECN1Q14457 450 aa24.65■■□□□ 1.54
MBD3-209ENST00000592012 TRPM3Q9HCF6 1732 aaPredicted RBP24.65■■□□□ 1.54
MBD3-209ENST00000592012 MFAP1P55081 439 aaKnown RBP24.65■■□□□ 1.54
MBD3-209ENST00000592012 LMOD2Q6P5Q4 547 aa24.65■■□□□ 1.54
MBD3-209ENST00000592012 CACNA1FO60840 1977 aa24.64■■□□□ 1.54
MBD3-209ENST00000592012 CCT4P50991 539 aaKnown RBP24.64■■□□□ 1.54
MBD3-209ENST00000592012 C22orf23Q9BZE7 217 aa24.64■■□□□ 1.54
MBD3-209ENST00000592012 SLC4A10Q6U841 1118 aa24.64■■□□□ 1.53
MBD3-209ENST00000592012 FLIIQ13045 1269 aa24.63■■□□□ 1.53
MBD3-209ENST00000592012 LGR6Q9HBX8 967 aa24.62■■□□□ 1.53
MBD3-209ENST00000592012 PLEKHG5O94827 1062 aa24.62■■□□□ 1.53
MBD3-209ENST00000592012 NECTIN2Q92692 538 aa24.61■■□□□ 1.53
MBD3-209ENST00000592012 KIF1AQ12756 1690 aa24.61■■□□□ 1.53
MBD3-209ENST00000592012 FAM208AQ9UK61 1670 aaKnown RBP24.61■■□□□ 1.53
MBD3-209ENST00000592012 NCAPD2Q15021 1401 aa24.6■■□□□ 1.53
MBD3-209ENST00000592012 AXIN2Q9Y2T1 843 aa24.6■■□□□ 1.53
MBD3-209ENST00000592012 MST1RQ04912 1400 aa24.59■■□□□ 1.53
MBD3-209ENST00000592012 FKBP5Q13451 457 aaPredicted RBP24.59■■□□□ 1.53
MBD3-209ENST00000592012 PLEKHO1Q53GL0 409 aaPredicted RBP24.59■■□□□ 1.53
MBD3-209ENST00000592012 AKAP4Q5JQC9 854 aa24.59■■□□□ 1.53
MBD3-209ENST00000592012 ANKRD24Q8TF21 1146 aa24.59■■□□□ 1.53
MBD3-209ENST00000592012 MED1Q15648 1581 aaPredicted RBP24.58■■□□□ 1.53
MBD3-209ENST00000592012 PLEKHM2Q8IWE5 1019 aa24.58■■□□□ 1.53
MBD3-209ENST00000592012 AMOTQ4VCS5 1084 aa24.58■■□□□ 1.52
MBD3-209ENST00000592012 ZNF530Q6P9A1 599 aaPredicted RBP24.57■■□□□ 1.52
MBD3-209ENST00000592012 TBC1D2Q9BYX2 928 aa24.57■■□□□ 1.52
MBD3-209ENST00000592012 TMEM94Q12767 1356 aa24.57■■□□□ 1.52
MBD3-209ENST00000592012 ATF3P18847 181 aa24.57■■□□□ 1.52
MBD3-209ENST00000592012 NFKBIBQ15653 356 aa24.57■■□□□ 1.52
MBD3-209ENST00000592012 EIF4A1P60842 406 aaKnown RBP24.56■■□□□ 1.52
MBD3-209ENST00000592012 LMO7Q8WWI1 1683 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms