RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 ZNF395Q9H8N7 513 aaPredicted RBP8.11□□□□□ -1.11
TPM4-214ENST00000591645 ADAMTS8Q9UP79 889 aa8.11□□□□□ -1.11
TPM4-214ENST00000591645 ITGA6P23229 1130 aa8.1□□□□□ -1.11
TPM4-214ENST00000591645 ADD1P35611 737 aaKnown RBP8.1□□□□□ -1.11
TPM4-214ENST00000591645 ERVK-9P63128 1117 aa8.1□□□□□ -1.11
TPM4-214ENST00000591645 GDPD2Q9HCC8 539 aa8.1□□□□□ -1.11
TPM4-214ENST00000591645 POLMQ9NP87 494 aaPredicted RBP8.1□□□□□ -1.11
TPM4-214ENST00000591645 CDC14CA4D256 554 aa8.09□□□□□ -1.11
TPM4-214ENST00000591645 EIF4G2P78344 907 aaKnown RBP eCLIP8.09□□□□□ -1.11
TPM4-214ENST00000591645 WASHC4Q2M389 1173 aa8.09□□□□□ -1.11
TPM4-214ENST00000591645 ZNF385CQ66K41 422 aaPredicted RBP8.09□□□□□ -1.11
TPM4-214ENST00000591645 KDF1Q8NAX2 398 aaPredicted RBP8.09□□□□□ -1.11
TPM4-214ENST00000591645 LOC100996750A0A140TA64 210 aa8.08□□□□□ -1.12
TPM4-214ENST00000591645 PTGIRP43119 386 aa8.08□□□□□ -1.12
TPM4-214ENST00000591645 RASSF7Q02833 373 aa8.08□□□□□ -1.12
TPM4-214ENST00000591645 RNF217Q8TC41 542 aa8.08□□□□□ -1.12
TPM4-214ENST00000591645 WHAMMQ8TF30 809 aa8.08□□□□□ -1.12
TPM4-214ENST00000591645 KRTAP4-6Q9BYQ5 205 aa8.08□□□□□ -1.12
TPM4-214ENST00000591645 CYLDQ9NQC7 956 aa8.08□□□□□ -1.12
TPM4-214ENST00000591645 CEP126Q9P2H0 1117 aa8.08□□□□□ -1.12
TPM4-214ENST00000591645 SENP3-EIF4A1A0A087X0R7 540 aa8.07□□□□□ -1.12
TPM4-214ENST00000591645 FLIIQ13045 1269 aa8.07□□□□□ -1.12
TPM4-214ENST00000591645 CC2D2BQ6DHV5 1058 aa8.07□□□□□ -1.12
TPM4-214ENST00000591645 SVOPQ8N4V2 548 aa8.07□□□□□ -1.12
TPM4-214ENST00000591645 COG6Q9Y2V7 657 aa8.07□□□□□ -1.12
TPM4-214ENST00000591645 GDF11O95390 407 aa8.06□□□□□ -1.12
TPM4-214ENST00000591645 ABL2P42684 1182 aa8.06□□□□□ -1.12
TPM4-214ENST00000591645 SV2AQ7L0J3 742 aa8.06□□□□□ -1.12
TPM4-214ENST00000591645 TMEM151AQ8N4L1 468 aa8.06□□□□□ -1.12
TPM4-214ENST00000591645 PCDHB11Q9Y5F2 797 aa8.06□□□□□ -1.12
TPM4-214ENST00000591645 SOX11P35716 441 aa8.05□□□□□ -1.12
TPM4-214ENST00000591645 SUZ12Q15022 739 aaKnown RBP8.05□□□□□ -1.12
TPM4-214ENST00000591645 FOXD4L5Q5VV16 416 aaPredicted RBP8.05□□□□□ -1.12
TPM4-214ENST00000591645 ATP5J2-PTCD1G3V325 749 aa8.04□□□□□ -1.12
TPM4-214ENST00000591645 TRAK2O60296 914 aa8.04□□□□□ -1.12
TPM4-214ENST00000591645 SLURP2P0DP57 97 aa8.04□□□□□ -1.12
TPM4-214ENST00000591645 VAC14Q08AM6 782 aa8.04□□□□□ -1.12
TPM4-214ENST00000591645 PHTF2Q8N3S3 785 aa8.04□□□□□ -1.12
TPM4-214ENST00000591645 CHIC2Q9UKJ5 165 aa8.04□□□□□ -1.12
TPM4-214ENST00000591645 ARHGEF15O94989 841 aa8.03□□□□□ -1.12
TPM4-214ENST00000591645 SCTRP47872 440 aa8.03□□□□□ -1.12
TPM4-214ENST00000591645 CYP2U1Q7Z449 544 aa8.03□□□□□ -1.12
TPM4-214ENST00000591645 CCDC85AQ96PX6 553 aaPredicted RBP8.03□□□□□ -1.12
TPM4-214ENST00000591645 GPC1P35052 558 aa8.02□□□□□ -1.13
TPM4-214ENST00000591645 RNF144AP50876 292 aaPredicted RBP8.02□□□□□ -1.13
TPM4-214ENST00000591645 OSBPL3Q9H4L5 887 aa8.02□□□□□ -1.13
TPM4-214ENST00000591645 CUEDC1Q9NWM3 386 aaPredicted RBP8.02□□□□□ -1.13
TPM4-214ENST00000591645 SLFNL1Q499Z3 407 aa8.01□□□□□ -1.13
TPM4-214ENST00000591645 RNF225M0QZC1 329 aaPredicted RBP8□□□□□ -1.13
TPM4-214ENST00000591645 CLN3Q13286 438 aa8□□□□□ -1.13
TPM4-214ENST00000591645 LYSMD3Q7Z3D4 306 aa8□□□□□ -1.13
TPM4-214ENST00000591645 PRICKLE2Q7Z3G6 844 aa8□□□□□ -1.13
TPM4-214ENST00000591645 RNF135Q8IUD6 432 aa8□□□□□ -1.13
TPM4-214ENST00000591645 WWC1Q8IX03 1113 aa8□□□□□ -1.13
TPM4-214ENST00000591645 A0A1W2PRU2 124 aa7.99□□□□□ -1.13
TPM4-214ENST00000591645 RAD21O60216 631 aa7.99□□□□□ -1.13
TPM4-214ENST00000591645 ADAMTS2O95450 1211 aa7.99□□□□□ -1.13
TPM4-214ENST00000591645 MYCP01106 439 aaPredicted RBP7.99□□□□□ -1.13
TPM4-214ENST00000591645 IRS1P35568 1242 aa7.99□□□□□ -1.13
TPM4-214ENST00000591645 LYPD4Q6UWN0 246 aa7.99□□□□□ -1.13
TPM4-214ENST00000591645 POM121Q96HA1 1249 aa7.99□□□□□ -1.13
TPM4-214ENST00000591645 CDCA7Q9BWT1 371 aaPredicted RBP7.99□□□□□ -1.13
TPM4-214ENST00000591645 DOLKQ9UPQ8 538 aa7.99□□□□□ -1.13
TPM4-214ENST00000591645 GNRH1P01148 92 aa7.98□□□□□ -1.13
TPM4-214ENST00000591645 RHOQP17081 205 aa7.98□□□□□ -1.13
TPM4-214ENST00000591645 UBTFP17480 764 aaKnown RBP7.98□□□□□ -1.13
TPM4-214ENST00000591645 SEMA3FQ13275 785 aa7.98□□□□□ -1.13
TPM4-214ENST00000591645 GAS6Q14393 721 aa7.98□□□□□ -1.13
TPM4-214ENST00000591645 ESF1Q9H501 851 aaKnown RBP7.98□□□□□ -1.13
TPM4-214ENST00000591645 MARSP56192 900 aaKnown RBP7.97□□□□□ -1.13
TPM4-214ENST00000591645 MAP7D1Q3KQU3 841 aa7.97□□□□□ -1.13
TPM4-214ENST00000591645 ALG2Q9H553 416 aa7.97□□□□□ -1.13
TPM4-214ENST00000591645 MEN1O00255 615 aa7.96□□□□□ -1.14
TPM4-214ENST00000591645 SRSF11Q05519 484 aaKnown RBP7.96□□□□□ -1.14
TPM4-214ENST00000591645 USP4Q13107 963 aa7.96□□□□□ -1.14
TPM4-214ENST00000591645 SIRT1Q96EB6 747 aa7.96□□□□□ -1.14
TPM4-214ENST00000591645 ARHGEF10LQ9HCE6 1279 aa7.96□□□□□ -1.14
TPM4-214ENST00000591645 TSGA10IPQ3SY00 556 aa7.95□□□□□ -1.14
TPM4-214ENST00000591645 PLPP7Q8NBV4 271 aa7.95□□□□□ -1.14
TPM4-214ENST00000591645 NFATC2IPQ8NCF5 419 aa7.95□□□□□ -1.14
TPM4-214ENST00000591645 NLRP3Q96P20 1036 aa7.95□□□□□ -1.14
TPM4-214ENST00000591645 GRIP2Q9C0E4 1043 aa7.95□□□□□ -1.14
TPM4-214ENST00000591645 SPATA31C2B4DYI2 1134 aa7.94□□□□□ -1.14
TPM4-214ENST00000591645 GPR25O00155 361 aa7.94□□□□□ -1.14
TPM4-214ENST00000591645 CELA2BP08218 269 aaPredicted RBP7.94□□□□□ -1.14
TPM4-214ENST00000591645 GPAT2Q6NUI2 795 aa7.94□□□□□ -1.14
TPM4-214ENST00000591645 ESYT1Q9BSJ8 1104 aa7.94□□□□□ -1.14
TPM4-214ENST00000591645 HRH3Q9Y5N1 445 aa7.94□□□□□ -1.14
TPM4-214ENST00000591645 IL2RAP01589 272 aa7.93□□□□□ -1.14
TPM4-214ENST00000591645 DBN1Q16643 649 aa7.93□□□□□ -1.14
TPM4-214ENST00000591645 OXLD1Q5BKU9 147 aa7.93□□□□□ -1.14
TPM4-214ENST00000591645 WDR44Q5JSH3 913 aa7.93□□□□□ -1.14
TPM4-214ENST00000591645 ZNF837Q96EG3 531 aaPredicted RBP7.93□□□□□ -1.14
TPM4-214ENST00000591645 DNMT3AQ9Y6K1 912 aaPredicted RBP7.93□□□□□ -1.14
TPM4-214ENST00000591645 MAP3K10Q02779 954 aa7.92□□□□□ -1.14
TPM4-214ENST00000591645 ESCO1Q5FWF5 840 aa7.92□□□□□ -1.14
TPM4-214ENST00000591645 RIPOR1Q6ZS17 1223 aa7.92□□□□□ -1.14
TPM4-214ENST00000591645 TRIM22Q8IYM9 498 aa7.92□□□□□ -1.14
TPM4-214ENST00000591645 CNKSR1Q969H4 720 aa7.92□□□□□ -1.14
TPM4-214ENST00000591645 SCARF2Q96GP6 870 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms