RNA–Protein interactions for RNA: ENST00000591470.5

GCDH-216, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-216ENST00000591470 NFAT5O94916 1531 aa23.83■■□□□ 1.41
GCDH-216ENST00000591470 KDM4FA0A1W2PPD8 638 aa23.83■■□□□ 1.4
GCDH-216ENST00000591470 FOXO3O43524 673 aa23.81■■□□□ 1.4
GCDH-216ENST00000591470 HTATSF1O43719 755 aaKnown RBP23.81■■□□□ 1.4
GCDH-216ENST00000591470 USP19O94966 1318 aa23.81■■□□□ 1.4
GCDH-216ENST00000591470 RBM33Q96EV2 1170 aaKnown RBP23.81■■□□□ 1.4
GCDH-216ENST00000591470 PHRF1Q9P1Y6 1649 aaKnown RBP23.81■■□□□ 1.4
GCDH-216ENST00000591470 RTF1Q92541 710 aaKnown RBP23.79■■□□□ 1.4
GCDH-216ENST00000591470 RGS12O14924 1447 aa23.78■■□□□ 1.4
GCDH-216ENST00000591470 KRT24Q2M2I5 525 aa23.78■■□□□ 1.4
GCDH-216ENST00000591470 ESCO1Q5FWF5 840 aa23.77■■□□□ 1.4
GCDH-216ENST00000591470 SEC24BO95487 1268 aa23.77■■□□□ 1.4
GCDH-216ENST00000591470 NUCB1Q02818 461 aa23.77■■□□□ 1.4
GCDH-216ENST00000591470 INTS3Q68E01 1043 aaKnown RBP23.75■■□□□ 1.39
GCDH-216ENST00000591470 IP6K1Q92551 441 aa23.75■■□□□ 1.39
GCDH-216ENST00000591470 PSME1Q06323 249 aa23.75■■□□□ 1.39
GCDH-216ENST00000591470 C14orf37Q86TY3 774 aa23.75■■□□□ 1.39
GCDH-216ENST00000591470 PTPRCP08575 1304 aa23.74■■□□□ 1.39
GCDH-216ENST00000591470 GCC1Q96CN9 775 aa23.73■■□□□ 1.39
GCDH-216ENST00000591470 TSPYL4Q9UJ04 414 aa23.73■■□□□ 1.39
GCDH-216ENST00000591470 GNAT3A8MTJ3 354 aa23.73■■□□□ 1.39
GCDH-216ENST00000591470 KCNH5Q8NCM2 988 aa23.73■■□□□ 1.39
GCDH-216ENST00000591470 SLIT3O75094 1523 aa23.72■■□□□ 1.39
GCDH-216ENST00000591470 MSH6P52701 1360 aa23.72■■□□□ 1.39
GCDH-216ENST00000591470 MAP3K5Q99683 1374 aa23.72■■□□□ 1.39
GCDH-216ENST00000591470 TRPM3Q9HCF6 1732 aaPredicted RBP23.71■■□□□ 1.39
GCDH-216ENST00000591470 KIF1AQ12756 1690 aa23.71■■□□□ 1.39
GCDH-216ENST00000591470 CHD1LQ86WJ1 897 aa23.7■■□□□ 1.39
GCDH-216ENST00000591470 C1orf115Q9H7X2 142 aa23.7■■□□□ 1.39
GCDH-216ENST00000591470 MIS18AQ9NYP9 233 aa23.7■■□□□ 1.39
GCDH-216ENST00000591470 SIRT2Q8IXJ6 389 aa23.7■■□□□ 1.38
GCDH-216ENST00000591470 LTV1Q96GA3 475 aaPredicted RBP23.69■■□□□ 1.38
GCDH-216ENST00000591470 BABAM1Q9NWV8 329 aa23.69■■□□□ 1.38
GCDH-216ENST00000591470 ORAI2Q96SN7 254 aa23.68■■□□□ 1.38
GCDH-216ENST00000591470 FAM208AQ9UK61 1670 aaKnown RBP23.67■■□□□ 1.38
GCDH-216ENST00000591470 NBR1Q14596 966 aa23.66■■□□□ 1.38
GCDH-216ENST00000591470 SOS1Q07889 1333 aaPredicted RBP23.66■■□□□ 1.38
GCDH-216ENST00000591470 IL17REQ8NFR9 667 aa23.66■■□□□ 1.38
GCDH-216ENST00000591470 TBC1D32Q96NH3 1257 aa23.66■■□□□ 1.38
GCDH-216ENST00000591470 UPF2Q9HAU5 1272 aaKnown RBP23.66■■□□□ 1.38
GCDH-216ENST00000591470 SLC4A2P04920 1241 aa23.65■■□□□ 1.38
GCDH-216ENST00000591470 PROSER2Q86WR7 435 aaPredicted RBP23.65■■□□□ 1.38
GCDH-216ENST00000591470 LNPKQ9C0E8 428 aa23.65■■□□□ 1.38
GCDH-216ENST00000591470 DAXXQ9UER7 740 aaPredicted RBP23.65■■□□□ 1.38
GCDH-216ENST00000591470 MST1RQ04912 1400 aa23.65■■□□□ 1.38
GCDH-216ENST00000591470 C1orf167Q5SNV9 1468 aa23.65■■□□□ 1.38
GCDH-216ENST00000591470 MED1Q15648 1581 aaPredicted RBP23.64■■□□□ 1.38
GCDH-216ENST00000591470 NCAPD2Q15021 1401 aa23.64■■□□□ 1.37
GCDH-216ENST00000591470 ATP10DQ9P241 1426 aa23.64■■□□□ 1.37
GCDH-216ENST00000591470 USHBP1Q8N6Y0 703 aa23.64■■□□□ 1.37
GCDH-216ENST00000591470 RGPD2P0DJD1 1756 aa23.64■■□□□ 1.37
GCDH-216ENST00000591470 SLC4A3P48751 1232 aa23.63■■□□□ 1.37
GCDH-216ENST00000591470 NBPF6Q5VWK0 638 aa23.63■■□□□ 1.37
GCDH-216ENST00000591470 NBPF4Q96M43 638 aa23.63■■□□□ 1.37
GCDH-216ENST00000591470 CEMIPQ8WUJ3 1361 aa23.62■■□□□ 1.37
GCDH-216ENST00000591470 TAF7Q15545 349 aaPredicted RBP23.62■■□□□ 1.37
GCDH-216ENST00000591470 ANKRD45Q5TZF3 282 aa23.62■■□□□ 1.37
GCDH-216ENST00000591470 ARHGEF25Q86VW2 580 aa23.62■■□□□ 1.37
GCDH-216ENST00000591470 LMO7Q8WWI1 1683 aa23.61■■□□□ 1.37
GCDH-216ENST00000591470 CAMTA1Q9Y6Y1 1673 aa23.61■■□□□ 1.37
GCDH-216ENST00000591470 GCP02774 474 aa23.61■■□□□ 1.37
GCDH-216ENST00000591470 C19orf44Q9H6X5 657 aa23.61■■□□□ 1.37
GCDH-216ENST00000591470 ANKRD44Q8N8A2 993 aa23.6■■□□□ 1.37
GCDH-216ENST00000591470 CACNA1FO60840 1977 aa23.6■■□□□ 1.37
GCDH-216ENST00000591470 RPAP2Q8IXW5 612 aaPredicted RBP23.6■■□□□ 1.37
GCDH-216ENST00000591470 ALS2Q96Q42 1657 aa23.59■■□□□ 1.37
GCDH-216ENST00000591470 G2E3Q7L622 706 aa23.59■■□□□ 1.37
GCDH-216ENST00000591470 DCTPP1Q9H773 170 aa23.59■■□□□ 1.37
GCDH-216ENST00000591470 BMP2KLQ5H9B9 411 aa23.58■■□□□ 1.37
GCDH-216ENST00000591470 XPCQ01831 940 aaPredicted RBP23.58■■□□□ 1.36
GCDH-216ENST00000591470 CCDC30Q5VVM6 783 aa23.58■■□□□ 1.36
GCDH-216ENST00000591470 KRT28Q7Z3Y7 464 aa23.58■■□□□ 1.36
GCDH-216ENST00000591470 STK31Q9BXU1 1019 aa23.58■■□□□ 1.36
GCDH-216ENST00000591470 N4BP2Q86UW6 1770 aaPredicted RBP23.57■■□□□ 1.36
GCDH-216ENST00000591470 CCT4P50991 539 aaKnown RBP23.57■■□□□ 1.36
GCDH-216ENST00000591470 STRCP1A6NGW2 1772 aa23.57■■□□□ 1.36
GCDH-216ENST00000591470 KDM3BQ7LBC6 1761 aa23.57■■□□□ 1.36
GCDH-216ENST00000591470 DCCP43146 1447 aa23.56■■□□□ 1.36
GCDH-216ENST00000591470 NCOA3Q9Y6Q9 1424 aa23.56■■□□□ 1.36
GCDH-216ENST00000591470 CEP85Q6P2H3 762 aa23.56■■□□□ 1.36
GCDH-216ENST00000591470 USP35Q9P2H5 1018 aa23.56■■□□□ 1.36
GCDH-216ENST00000591470 RTL5Q5HYW3 569 aaPredicted RBP23.55■■□□□ 1.36
GCDH-216ENST00000591470 MEIS3Q99687 375 aa23.55■■□□□ 1.36
GCDH-216ENST00000591470 HSPA2P54652 639 aa23.54■■□□□ 1.36
GCDH-216ENST00000591470 BECN1Q14457 450 aa23.54■■□□□ 1.36
GCDH-216ENST00000591470 ZBTB7CA1YPR0 619 aa23.53■■□□□ 1.36
GCDH-216ENST00000591470 LRRC59Q96AG4 307 aaKnown RBP23.53■■□□□ 1.36
GCDH-216ENST00000591470 FLIIQ13045 1269 aa23.52■■□□□ 1.36
GCDH-216ENST00000591470 AKAP4Q5JQC9 854 aa23.52■■□□□ 1.36
GCDH-216ENST00000591470 PXDNLA1KZ92 1463 aa23.52■■□□□ 1.36
GCDH-216ENST00000591470 OVOS2A0A0G2JMS6 1433 aa23.52■■□□□ 1.35
GCDH-216ENST00000591470 F6X3S4 739 aa23.51■■□□□ 1.35
GCDH-216ENST00000591470 AMOTQ4VCS5 1084 aa23.51■■□□□ 1.35
GCDH-216ENST00000591470 PLEKHO1Q53GL0 409 aaPredicted RBP23.51■■□□□ 1.35
GCDH-216ENST00000591470 C22orf23Q9BZE7 217 aa23.51■■□□□ 1.35
GCDH-216ENST00000591470 TMEM94Q12767 1356 aa23.51■■□□□ 1.35
GCDH-216ENST00000591470 MFAP1P55081 439 aaKnown RBP23.51■■□□□ 1.35
GCDH-216ENST00000591470 ANKRD24Q8TF21 1146 aa23.51■■□□□ 1.35
GCDH-216ENST00000591470 LMTK3Q96Q04 1460 aa23.51■■□□□ 1.35
GCDH-216ENST00000591470 LGR6Q9HBX8 967 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms