RNA–Protein interactions for RNA: ENST00000590658.1

UBE2O-206, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

TSL 4

Gene UBE2O, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-206ENST00000590658 GLI3P10071 1580 aa15.23■□□□□ 0.03
UBE2O-206ENST00000590658 GJD4Q96KN9 370 aaPredicted RBP15.22■□□□□ 0.03
UBE2O-206ENST00000590658 AMOTQ4VCS5 1084 aa15.21■□□□□ 0.03
UBE2O-206ENST00000590658 CCDC146Q8IYE0 955 aa15.21■□□□□ 0.03
UBE2O-206ENST00000590658 PLEKHF1Q96S99 279 aa15.21■□□□□ 0.03
UBE2O-206ENST00000590658 THSD7AQ9UPZ6 1657 aa15.2■□□□□ 0.02
UBE2O-206ENST00000590658 PLEKHO1Q53GL0 409 aaPredicted RBP15.2■□□□□ 0.02
UBE2O-206ENST00000590658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.2■□□□□ 0.02
UBE2O-206ENST00000590658 SPG7Q9UQ90 795 aa15.2■□□□□ 0.02
UBE2O-206ENST00000590658 LRRC37A3O60309 1634 aa15.19■□□□□ 0.02
UBE2O-206ENST00000590658 GAS2L2Q8NHY3 880 aa15.19■□□□□ 0.02
UBE2O-206ENST00000590658 TNS2Q63HR2 1409 aa15.18■□□□□ 0.02
UBE2O-206ENST00000590658 RBM6P78332 1123 aaKnown RBP15.18■□□□□ 0.02
UBE2O-206ENST00000590658 FAM98CQ17RN3 349 aaKnown RBP15.18■□□□□ 0.02
UBE2O-206ENST00000590658 PHACTR3Q96KR7 559 aa15.18■□□□□ 0.02
UBE2O-206ENST00000590658 SHANK3Q9BYB0 1731 aa15.17■□□□□ 0.02
UBE2O-206ENST00000590658 NGEFQ8N5V2 710 aa15.17■□□□□ 0.02
UBE2O-206ENST00000590658 ZCRB1Q8TBF4 217 aaKnown RBP15.17■□□□□ 0.02
UBE2O-206ENST00000590658 PCDH11XQ9BZA7 1347 aa15.17■□□□□ 0.02
UBE2O-206ENST00000590658 PCDH11YQ9BZA8 1340 aa15.17■□□□□ 0.02
UBE2O-206ENST00000590658 DLG5Q8TDM6 1919 aa15.16■□□□□ 0.02
UBE2O-206ENST00000590658 A0A0G2JS52 829 aa15.16■□□□□ 0.02
UBE2O-206ENST00000590658 APAF1O14727 1248 aa15.16■□□□□ 0.02
UBE2O-206ENST00000590658 MYT1Q01538 1121 aa15.16■□□□□ 0.02
UBE2O-206ENST00000590658 NFE2L2Q16236 605 aa15.16■□□□□ 0.02
UBE2O-206ENST00000590658 ZNF530Q6P9A1 599 aaPredicted RBP15.16■□□□□ 0.02
UBE2O-206ENST00000590658 EXOC5O00471 708 aa15.15■□□□□ 0.02
UBE2O-206ENST00000590658 ONECUT3O60422 494 aaPredicted RBP15.15■□□□□ 0.02
UBE2O-206ENST00000590658 RXRBP28702 533 aa15.15■□□□□ 0.02
UBE2O-206ENST00000590658 DDB1Q16531 1140 aa15.15■□□□□ 0.02
UBE2O-206ENST00000590658 MTHFSDQ2M296 383 aaKnown RBP15.15■□□□□ 0.02
UBE2O-206ENST00000590658 NCBP3Q53F19 620 aaKnown RBP15.15■□□□□ 0.02
UBE2O-206ENST00000590658 C1orf141Q5JVX7 400 aa15.15■□□□□ 0.02
UBE2O-206ENST00000590658 RGS17Q9UGC6 210 aaPredicted RBP15.15■□□□□ 0.02
UBE2O-206ENST00000590658 MAP3K5Q99683 1374 aa15.14■□□□□ 0.01
UBE2O-206ENST00000590658 TMPOP42166 694 aaKnown RBP15.14■□□□□ 0.01
UBE2O-206ENST00000590658 LMOD3Q0VAK6 560 aa15.14■□□□□ 0.01
UBE2O-206ENST00000590658 RIPK4P57078 832 aa15.13■□□□□ 0.01
UBE2O-206ENST00000590658 AKAP4Q5JQC9 854 aa15.13■□□□□ 0.01
UBE2O-206ENST00000590658 IFNL2Q8IZJ0 200 aa15.13■□□□□ 0.01
UBE2O-206ENST00000590658 GNAT3A8MTJ3 354 aa15.12■□□□□ 0.01
UBE2O-206ENST00000590658 HTATSF1O43719 755 aaKnown RBP15.12■□□□□ 0.01
UBE2O-206ENST00000590658 HSP90AB1P08238 724 aaKnown RBP15.12■□□□□ 0.01
UBE2O-206ENST00000590658 HNRNPUQ00839 825 aaKnown RBP eCLIP15.12■□□□□ 0.01
UBE2O-206ENST00000590658 NEUROD2Q15784 382 aa15.12■□□□□ 0.01
UBE2O-206ENST00000590658 POTEAQ6S8J7 498 aa15.12■□□□□ 0.01
UBE2O-206ENST00000590658 RRP7AQ9Y3A4 280 aaKnown RBP15.12■□□□□ 0.01
UBE2O-206ENST00000590658 PHKG2P15735 406 aa15.11■□□□□ 0.01
UBE2O-206ENST00000590658 CCDC27Q2M243 656 aa15.11■□□□□ 0.01
UBE2O-206ENST00000590658 SEPT12Q8IYM1 358 aa15.11■□□□□ 0.01
UBE2O-206ENST00000590658 RTF1Q92541 710 aaKnown RBP15.11■□□□□ 0.01
UBE2O-206ENST00000590658 VIRMAQ69YN4 1812 aaKnown RBP15.1■□□□□ 0.01
UBE2O-206ENST00000590658 ADAMTS7Q9UKP4 1686 aa15.1■□□□□ 0.01
UBE2O-206ENST00000590658 CYP27B1O15528 508 aa15.1■□□□□ 0.01
UBE2O-206ENST00000590658 PDE3BQ13370 1112 aa15.1■□□□□ 0.01
UBE2O-206ENST00000590658 DDX54Q8TDD1 881 aaKnown RBP15.1■□□□□ 0.01
UBE2O-206ENST00000590658 SCN11AQ9UI33 1791 aa15.1■□□□□ 0.01
UBE2O-206ENST00000590658 BRWD3Q6RI45 1802 aa15.09■□□□□ 0.01
UBE2O-206ENST00000590658 CALD1Q05682 793 aaKnown RBP15.08■□□□□ 0
UBE2O-206ENST00000590658 NKX1-1Q15270 411 aaPredicted RBP15.08■□□□□ 0
UBE2O-206ENST00000590658 DCAF5Q96JK2 942 aa15.08■□□□□ 0
UBE2O-206ENST00000590658 RGS12O14924 1447 aa15.08■□□□□ 0
UBE2O-206ENST00000590658 YTHDC1Q96MU7 727 aaKnown RBP15.07■□□□□ 0
UBE2O-206ENST00000590658 TRIM35Q9UPQ4 493 aa15.07■□□□□ 0
UBE2O-206ENST00000590658 SALL2Q9Y467 1007 aaPredicted RBP15.07■□□□□ 0
UBE2O-206ENST00000590658 ZBED9Q6R2W3 1325 aa15.07■□□□□ 0
UBE2O-206ENST00000590658 SENP3-EIF4A1A0A087X0R7 540 aa15.06■□□□□ 0
UBE2O-206ENST00000590658 RNMTO43148 476 aaKnown RBP15.06■□□□□ 0
UBE2O-206ENST00000590658 WWC1Q8IX03 1113 aa15.06■□□□□ 0
UBE2O-206ENST00000590658 MARCH10Q8NA82 808 aaPredicted RBP15.06■□□□□ 0
UBE2O-206ENST00000590658 CEMIPQ8WUJ3 1361 aa15.06■□□□□ 0
UBE2O-206ENST00000590658 KDM6AO15550 1401 aaPredicted RBP15.06■□□□□ 0
UBE2O-206ENST00000590658 DOT1LQ8TEK3 1739 aa15.06■□□□□ 0
UBE2O-206ENST00000590658 TOGARAM1Q9Y4F4 1720 aa15.06■□□□□ 0
UBE2O-206ENST00000590658 MPRIPQ6WCQ1 1025 aa15.05■□□□□ -0
UBE2O-206ENST00000590658 MCM10Q7L590 875 aa15.05■□□□□ -0
UBE2O-206ENST00000590658 KRT27Q7Z3Y8 459 aa15.05■□□□□ -0
UBE2O-206ENST00000590658 MRC1P22897 1456 aa15.05■□□□□ -0
UBE2O-206ENST00000590658 BCL9O00512 1426 aa15.04■□□□□ -0
UBE2O-206ENST00000590658 ZNF521Q96K83 1311 aa15.04■□□□□ -0
UBE2O-206ENST00000590658 IL16Q14005 1332 aa15.03■□□□□ -0
UBE2O-206ENST00000590658 ERVV-2B6SEH9 535 aa15.03■□□□□ -0
UBE2O-206ENST00000590658 TEFQ10587 303 aa15.03■□□□□ -0
UBE2O-206ENST00000590658 DCTN1Q14203 1278 aa15.03■□□□□ -0
UBE2O-206ENST00000590658 WDR63Q8IWG1 891 aa15.03■□□□□ -0
UBE2O-206ENST00000590658 IL17REQ8NFR9 667 aa15.03■□□□□ -0
UBE2O-206ENST00000590658 LGR6Q9HBX8 967 aa15.03■□□□□ -0
UBE2O-206ENST00000590658 SIPA1L3O60292 1781 aaPredicted RBP15.03■□□□□ -0
UBE2O-206ENST00000590658 ITGB4P16144 1822 aa15.02■□□□□ -0
UBE2O-206ENST00000590658 NHSQ6T4R5 1651 aa15.01□□□□□ -0.01
UBE2O-206ENST00000590658 CABP4P57796 275 aa15.01□□□□□ -0.01
UBE2O-206ENST00000590658 GOLGA2Q08379 1002 aa15.01□□□□□ -0.01
UBE2O-206ENST00000590658 THUMPD2Q9BTF0 503 aaKnown RBP15.01□□□□□ -0.01
UBE2O-206ENST00000590658 SLC52A2Q9HAB3 445 aa15.01□□□□□ -0.01
UBE2O-206ENST00000590658 FAM196AQ6ZSG2 479 aa15□□□□□ -0.01
UBE2O-206ENST00000590658 IFT57Q9NWB7 429 aa15□□□□□ -0.01
UBE2O-206ENST00000590658 SBF2Q86WG5 1849 aa15□□□□□ -0.01
UBE2O-206ENST00000590658 GNAI1P63096 354 aa14.99□□□□□ -0.01
UBE2O-206ENST00000590658 TAF7Q15545 349 aaPredicted RBP14.99□□□□□ -0.01
UBE2O-206ENST00000590658 BABAM1Q9NWV8 329 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms