RNA–Protein interactions for RNA: ENST00000590238.1

APBA3-206, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 5

Gene APBA3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-206ENST00000590238 USHBP1Q8N6Y0 703 aa22.19■■□□□ 1.14
APBA3-206ENST00000590238 NBPF4Q96M43 638 aa22.19■■□□□ 1.14
APBA3-206ENST00000590238 RTL1A6NKG5 1358 aa22.19■■□□□ 1.14
APBA3-206ENST00000590238 MEGF6O75095 1541 aa22.19■■□□□ 1.14
APBA3-206ENST00000590238 DOT1LQ8TEK3 1739 aa22.18■■□□□ 1.14
APBA3-206ENST00000590238 ZNF827Q17R98 1081 aa22.17■■□□□ 1.14
APBA3-206ENST00000590238 ZCRB1Q8TBF4 217 aaKnown RBP22.17■■□□□ 1.14
APBA3-206ENST00000590238 PRIM1P49642 420 aaKnown RBP22.16■■□□□ 1.14
APBA3-206ENST00000590238 HSP90AB2PQ58FF8 381 aa22.16■■□□□ 1.14
APBA3-206ENST00000590238 SYTL4Q96C24 671 aaPredicted RBP22.16■■□□□ 1.14
APBA3-206ENST00000590238 MTFR1LQ9H019 292 aa22.14■■□□□ 1.13
APBA3-206ENST00000590238 KCNQ4P56696 695 aa22.13■■□□□ 1.13
APBA3-206ENST00000590238 PANK3Q9H999 370 aa22.13■■□□□ 1.13
APBA3-206ENST00000590238 CGNL1Q0VF96 1302 aa22.12■■□□□ 1.13
APBA3-206ENST00000590238 SGIP1Q9BQI5 828 aa22.12■■□□□ 1.13
APBA3-206ENST00000590238 NSD2O96028 1365 aa22.12■■□□□ 1.13
APBA3-206ENST00000590238 INSRP06213 1382 aa22.12■■□□□ 1.13
APBA3-206ENST00000590238 SMG6Q86US8 1419 aaKnown RBP22.11■■□□□ 1.13
APBA3-206ENST00000590238 RAPGEF4Q8WZA2 1011 aa22.1■■□□□ 1.13
APBA3-206ENST00000590238 AKT1S1Q96B36 256 aa22.1■■□□□ 1.13
APBA3-206ENST00000590238 EMILIN1Q9Y6C2 1016 aa22.1■■□□□ 1.13
APBA3-206ENST00000590238 FLT4P35916 1363 aa22.1■■□□□ 1.13
APBA3-206ENST00000590238 LY75O60449 1722 aa22.09■■□□□ 1.13
APBA3-206ENST00000590238 DCAF8L1A6NGE4 600 aa22.09■■□□□ 1.13
APBA3-206ENST00000590238 YY1P25490 414 aa22.09■■□□□ 1.13
APBA3-206ENST00000590238 SLC27A3Q5K4L6 730 aa22.09■■□□□ 1.13
APBA3-206ENST00000590238 FHDC1Q9C0D6 1143 aaPredicted RBP22.09■■□□□ 1.13
APBA3-206ENST00000590238 TUBGCP6Q96RT7 1819 aa22.08■■□□□ 1.13
APBA3-206ENST00000590238 TATP17735 454 aaPredicted RBP22.08■■□□□ 1.13
APBA3-206ENST00000590238 KIF7Q2M1P5 1343 aa22.07■■□□□ 1.12
APBA3-206ENST00000590238 SYT17Q9BSW7 474 aa22.07■■□□□ 1.12
APBA3-206ENST00000590238 QSER1Q2KHR3 1735 aa22.06■■□□□ 1.12
APBA3-206ENST00000590238 KIF24Q5T7B8 1368 aa22.06■■□□□ 1.12
APBA3-206ENST00000590238 MAP2P11137 1827 aaKnown RBP22.06■■□□□ 1.12
APBA3-206ENST00000590238 PPM1GO15355 546 aaPredicted RBP22.05■■□□□ 1.12
APBA3-206ENST00000590238 TNNT2P45379 298 aaPredicted RBP22.05■■□□□ 1.12
APBA3-206ENST00000590238 PNPLA7Q6ZV29 1317 aa22.05■■□□□ 1.12
APBA3-206ENST00000590238 ARXQ96QS3 562 aa22.04■■□□□ 1.12
APBA3-206ENST00000590238 CCNL1Q9UK58 526 aaPredicted RBP22.03■■□□□ 1.12
APBA3-206ENST00000590238 KNSTRNQ9Y448 316 aa22.03■■□□□ 1.12
APBA3-206ENST00000590238 TFCP2L1Q9NZI6 479 aa22.02■■□□□ 1.12
APBA3-206ENST00000590238 ANKRD26Q9UPS8 1709 aa22.02■■□□□ 1.12
APBA3-206ENST00000590238 PCDH11XQ9BZA7 1347 aa22.02■■□□□ 1.12
APBA3-206ENST00000590238 PCDH11YQ9BZA8 1340 aa22.02■■□□□ 1.12
APBA3-206ENST00000590238 CYP27B1O15528 508 aa22.01■■□□□ 1.11
APBA3-206ENST00000590238 TOGARAM1Q9Y4F4 1720 aa22■■□□□ 1.11
APBA3-206ENST00000590238 ITGB4P16144 1822 aa21.99■■□□□ 1.11
APBA3-206ENST00000590238 SLC16A10Q8TF71 515 aa21.99■■□□□ 1.11
APBA3-206ENST00000590238 PKD1L3Q7Z443 1732 aa21.99■■□□□ 1.11
APBA3-206ENST00000590238 WASHC2AQ641Q2 1341 aa21.99■■□□□ 1.11
APBA3-206ENST00000590238 COL24A1Q17RW2 1714 aa21.98■■□□□ 1.11
APBA3-206ENST00000590238 MPRIPQ6WCQ1 1025 aa21.98■■□□□ 1.11
APBA3-206ENST00000590238 POLKQ9UBT6 870 aa21.98■■□□□ 1.11
APBA3-206ENST00000590238 MORC1Q86VD1 984 aa21.97■■□□□ 1.11
APBA3-206ENST00000590238 NCAPD2Q15021 1401 aa21.97■■□□□ 1.11
APBA3-206ENST00000590238 UTRNP46939 3433 aa21.96■■□□□ 1.11
APBA3-206ENST00000590238 EYA1Q99502 592 aa21.96■■□□□ 1.11
APBA3-206ENST00000590238 C5P01031 1676 aa21.95■■□□□ 1.1
APBA3-206ENST00000590238 KLHL34Q8N239 644 aa21.95■■□□□ 1.1
APBA3-206ENST00000590238 TAF1LQ8IZX4 1826 aa21.94■■□□□ 1.1
APBA3-206ENST00000590238 POLD1P28340 1107 aa21.94■■□□□ 1.1
APBA3-206ENST00000590238 COL23A1Q86Y22 540 aaPredicted RBP21.94■■□□□ 1.1
APBA3-206ENST00000590238 PALLDQ8WX93 1383 aa21.94■■□□□ 1.1
APBA3-206ENST00000590238 MAP3K5Q99683 1374 aa21.94■■□□□ 1.1
APBA3-206ENST00000590238 MSH5O43196 834 aa21.93■■□□□ 1.1
APBA3-206ENST00000590238 CNGB1Q14028 1251 aaPredicted RBP21.93■■□□□ 1.1
APBA3-206ENST00000590238 SPG7Q9UQ90 795 aa21.92■■□□□ 1.1
APBA3-206ENST00000590238 EIF4A2Q14240 407 aaKnown RBP21.91■■□□□ 1.1
APBA3-206ENST00000590238 CHD4Q14839 1912 aa21.9■■□□□ 1.1
APBA3-206ENST00000590238 NKX1-1Q15270 411 aaPredicted RBP21.9■■□□□ 1.1
APBA3-206ENST00000590238 PIGBQ92521 554 aa21.9■■□□□ 1.1
APBA3-206ENST00000590238 AMER1Q5JTC6 1135 aaPredicted RBP21.89■■□□□ 1.09
APBA3-206ENST00000590238 CC2D1BQ5T0F9 858 aaKnown RBP21.89■■□□□ 1.09
APBA3-206ENST00000590238 MSL1Q68DK7 614 aa21.89■■□□□ 1.09
APBA3-206ENST00000590238 NLGN2Q8NFZ4 835 aa21.87■■□□□ 1.09
APBA3-206ENST00000590238 SMARCC1Q92922 1105 aaPredicted RBP21.87■■□□□ 1.09
APBA3-206ENST00000590238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.87■■□□□ 1.09
APBA3-206ENST00000590238 C4BP0C0L5 1744 aa21.86■■□□□ 1.09
APBA3-206ENST00000590238 PHKG2P15735 406 aa21.86■■□□□ 1.09
APBA3-206ENST00000590238 GPR162Q16538 588 aa21.86■■□□□ 1.09
APBA3-206ENST00000590238 SMIM5Q71RC9 77 aa21.86■■□□□ 1.09
APBA3-206ENST00000590238 PER1O15534 1290 aaPredicted RBP21.85■■□□□ 1.09
APBA3-206ENST00000590238 AMIGO3Q86WK7 504 aa21.85■■□□□ 1.09
APBA3-206ENST00000590238 IFNL2Q8IZJ0 200 aa21.84■■□□□ 1.09
APBA3-206ENST00000590238 PELP1Q8IZL8 1130 aaKnown RBP21.84■■□□□ 1.09
APBA3-206ENST00000590238 ZNF784Q8NCA9 323 aaPredicted RBP21.84■■□□□ 1.09
APBA3-206ENST00000590238 TMOD3Q9NYL9 352 aa21.83■■□□□ 1.09
APBA3-206ENST00000590238 ASAP1Q9ULH1 1129 aa21.83■■□□□ 1.09
APBA3-206ENST00000590238 UBR3Q6ZT12 1888 aa21.83■■□□□ 1.08
APBA3-206ENST00000590238 IGSF1Q8N6C5 1336 aa21.82■■□□□ 1.08
APBA3-206ENST00000590238 GOLGB1Q14789 3259 aaKnown RBP21.82■■□□□ 1.08
APBA3-206ENST00000590238 AK7Q96M32 723 aa21.82■■□□□ 1.08
APBA3-206ENST00000590238 LOC102724428A0A0B4J2F2 783 aa21.81■■□□□ 1.08
APBA3-206ENST00000590238 SIK1P57059 783 aa21.81■■□□□ 1.08
APBA3-206ENST00000590238 FLAD1Q8NFF5 587 aa21.81■■□□□ 1.08
APBA3-206ENST00000590238 PHF14O94880 888 aa21.8■■□□□ 1.08
APBA3-206ENST00000590238 LINC00116Q8NCU8 138 aa21.8■■□□□ 1.08
APBA3-206ENST00000590238 HMGB2P26583 209 aaKnown RBP21.79■■□□□ 1.08
APBA3-206ENST00000590238 ITPK1Q13572 414 aa21.79■■□□□ 1.08
APBA3-206ENST00000590238 ATG3Q9NT62 314 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms