RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
TPM4-212ENST00000590180 TNS1Q9HBL0 1735 aaKnown RBP16.45■□□□□ 0.22
TPM4-212ENST00000590180 MAP2P11137 1827 aaKnown RBP16.45■□□□□ 0.22
TPM4-212ENST00000590180 EIF4A2Q14240 407 aaKnown RBP16.45■□□□□ 0.22
TPM4-212ENST00000590180 PRIM1P49642 420 aaKnown RBP16.44■□□□□ 0.22
TPM4-212ENST00000590180 PROM2Q8N271 834 aa16.44■□□□□ 0.22
TPM4-212ENST00000590180 RGPD2P0DJD1 1756 aa16.43■□□□□ 0.22
TPM4-212ENST00000590180 FAM208AQ9UK61 1670 aaKnown RBP16.43■□□□□ 0.22
TPM4-212ENST00000590180 TXNRD1Q16881 649 aa16.43■□□□□ 0.22
TPM4-212ENST00000590180 MEGF6O75095 1541 aa16.43■□□□□ 0.22
TPM4-212ENST00000590180 SPG7Q9UQ90 795 aa16.42■□□□□ 0.22
TPM4-212ENST00000590180 SBF2Q86WG5 1849 aa16.42■□□□□ 0.22
TPM4-212ENST00000590180 MTHFSP49914 203 aa16.4■□□□□ 0.22
TPM4-212ENST00000590180 PCDH11XQ9BZA7 1347 aa16.4■□□□□ 0.22
TPM4-212ENST00000590180 PCDH11YQ9BZA8 1340 aa16.4■□□□□ 0.22
TPM4-212ENST00000590180 CYP27B1O15528 508 aa16.38■□□□□ 0.21
TPM4-212ENST00000590180 STK32BQ9NY57 414 aa16.38■□□□□ 0.21
TPM4-212ENST00000590180 ANKRD26Q9UPS8 1709 aa16.37■□□□□ 0.21
TPM4-212ENST00000590180 MPRIPQ6WCQ1 1025 aa16.36■□□□□ 0.21
TPM4-212ENST00000590180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.36■□□□□ 0.21
TPM4-212ENST00000590180 IL13P35225 146 aa16.35■□□□□ 0.21
TPM4-212ENST00000590180 PLEKHO1Q53GL0 409 aaPredicted RBP16.35■□□□□ 0.21
TPM4-212ENST00000590180 SULT6B1Q6IMI4 303 aa16.35■□□□□ 0.21
TPM4-212ENST00000590180 IFNL2Q8IZJ0 200 aa16.35■□□□□ 0.21
TPM4-212ENST00000590180 ANO8Q9HCE9 1232 aaPredicted RBP16.35■□□□□ 0.21
TPM4-212ENST00000590180 IGSF1Q8N6C5 1336 aa16.35■□□□□ 0.21
TPM4-212ENST00000590180 SLC15A2Q16348 729 aa16.34■□□□□ 0.21
TPM4-212ENST00000590180 KCNQ4P56696 695 aa16.33■□□□□ 0.2
TPM4-212ENST00000590180 AEBP1Q8IUX7 1158 aa16.33■□□□□ 0.2
TPM4-212ENST00000590180 DIAPH1O60610 1272 aaKnown RBP16.32■□□□□ 0.2
TPM4-212ENST00000590180 PHKG2P15735 406 aa16.32■□□□□ 0.2
TPM4-212ENST00000590180 NCAPD2Q15021 1401 aa16.32■□□□□ 0.2
TPM4-212ENST00000590180 NKX1-1Q15270 411 aaPredicted RBP16.32■□□□□ 0.2
TPM4-212ENST00000590180 SLC27A3Q5K4L6 730 aa16.32■□□□□ 0.2
TPM4-212ENST00000590180 NHSQ6T4R5 1651 aa16.32■□□□□ 0.2
TPM4-212ENST00000590180 LRRC4BQ9NT99 713 aa16.32■□□□□ 0.2
TPM4-212ENST00000590180 NPC1L1Q9UHC9 1359 aa16.32■□□□□ 0.2
TPM4-212ENST00000590180 RREB1Q92766 1687 aa16.31■□□□□ 0.2
TPM4-212ENST00000590180 AMOTQ4VCS5 1084 aa16.31■□□□□ 0.2
TPM4-212ENST00000590180 CCNL1Q9UK58 526 aaPredicted RBP16.31■□□□□ 0.2
TPM4-212ENST00000590180 NUP188Q5SRE5 1749 aa16.31■□□□□ 0.2
TPM4-212ENST00000590180 ZNF530Q6P9A1 599 aaPredicted RBP16.3■□□□□ 0.2
TPM4-212ENST00000590180 PIGBQ92521 554 aa16.3■□□□□ 0.2
TPM4-212ENST00000590180 SPON1Q9HCB6 807 aa16.3■□□□□ 0.2
TPM4-212ENST00000590180 BTAF1O14981 1849 aa16.29■□□□□ 0.2
TPM4-212ENST00000590180 HMOX1P09601 288 aa16.29■□□□□ 0.2
TPM4-212ENST00000590180 PDGFDQ9GZP0 370 aaPredicted RBP16.29■□□□□ 0.2
TPM4-212ENST00000590180 TMOD3Q9NYL9 352 aa16.29■□□□□ 0.2
TPM4-212ENST00000590180 U2SURPO15042 1029 aaKnown RBP16.28■□□□□ 0.2
TPM4-212ENST00000590180 HSP90AB1P08238 724 aaKnown RBP16.28■□□□□ 0.2
TPM4-212ENST00000590180 C1orf141Q5JVX7 400 aa16.28■□□□□ 0.2
TPM4-212ENST00000590180 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
TPM4-212ENST00000590180 SHANK3Q9BYB0 1731 aa16.28■□□□□ 0.2
TPM4-212ENST00000590180 ZBTB7AO95365 584 aa16.27■□□□□ 0.2
TPM4-212ENST00000590180 CFAP53Q96M91 514 aa16.27■□□□□ 0.2
TPM4-212ENST00000590180 TFCP2L1Q9NZI6 479 aa16.27■□□□□ 0.2
TPM4-212ENST00000590180 ATF5Q9Y2D1 282 aaPredicted RBP16.27■□□□□ 0.2
TPM4-212ENST00000590180 RGPD3A6NKT7 1758 aaPredicted RBP16.27■□□□□ 0.2
TPM4-212ENST00000590180 RGPD4Q7Z3J3 1758 aa16.27■□□□□ 0.2
TPM4-212ENST00000590180 ZNF827Q17R98 1081 aa16.26■□□□□ 0.19
TPM4-212ENST00000590180 DCAF5Q96JK2 942 aa16.26■□□□□ 0.19
TPM4-212ENST00000590180 PPP1R1BQ9UD71 204 aaPredicted RBP16.26■□□□□ 0.19
TPM4-212ENST00000590180 SRCAPQ6ZRS2 3230 aa16.26■□□□□ 0.19
TPM4-212ENST00000590180 DOT1LQ8TEK3 1739 aa16.25■□□□□ 0.19
TPM4-212ENST00000590180 ERVV-2B6SEH9 535 aa16.25■□□□□ 0.19
TPM4-212ENST00000590180 PPP2R1AP30153 589 aa16.25■□□□□ 0.19
TPM4-212ENST00000590180 AKT1S1Q96B36 256 aa16.25■□□□□ 0.19
TPM4-212ENST00000590180 HMGB2P26583 209 aaKnown RBP16.24■□□□□ 0.19
TPM4-212ENST00000590180 CABP4P57796 275 aa16.24■□□□□ 0.19
TPM4-212ENST00000590180 ASAP1Q9ULH1 1129 aa16.24■□□□□ 0.19
TPM4-212ENST00000590180 PALLDQ8WX93 1383 aa16.24■□□□□ 0.19
TPM4-212ENST00000590180 DDX10Q13206 875 aaKnown RBP16.23■□□□□ 0.19
TPM4-212ENST00000590180 KDRP35968 1356 aa16.23■□□□□ 0.19
TPM4-212ENST00000590180 PLEKHG2Q9H7P9 1386 aa16.23■□□□□ 0.19
TPM4-212ENST00000590180 PKD1L3Q7Z443 1732 aa16.22■□□□□ 0.19
TPM4-212ENST00000590180 MSH5O43196 834 aa16.22■□□□□ 0.19
TPM4-212ENST00000590180 ZEB1P37275 1124 aaPredicted RBP16.22■□□□□ 0.19
TPM4-212ENST00000590180 NUDCQ9Y266 331 aa16.22■□□□□ 0.19
TPM4-212ENST00000590180 LOC102724428A0A0B4J2F2 783 aa16.21■□□□□ 0.19
TPM4-212ENST00000590180 SIK1P57059 783 aa16.21■□□□□ 0.19
TPM4-212ENST00000590180 AKAP4Q5JQC9 854 aa16.21■□□□□ 0.19
TPM4-212ENST00000590180 ATG3Q9NT62 314 aa16.21■□□□□ 0.19
TPM4-212ENST00000590180 ATP6V1AP38606 617 aa16.2■□□□□ 0.18
TPM4-212ENST00000590180 MTHFSDQ2M296 383 aaKnown RBP16.2■□□□□ 0.18
TPM4-212ENST00000590180 NFATC2IPQ8NCF5 419 aa16.2■□□□□ 0.18
TPM4-212ENST00000590180 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
TPM4-212ENST00000590180 MTFR1LQ9H019 292 aa16.2■□□□□ 0.18
TPM4-212ENST00000590180 LRP5O75197 1615 aa16.19■□□□□ 0.18
TPM4-212ENST00000590180 PNPLA7Q6ZV29 1317 aa16.19■□□□□ 0.18
TPM4-212ENST00000590180 U2AF1L5P0DN76 240 aaPredicted RBP16.18■□□□□ 0.18
TPM4-212ENST00000590180 U2AF1Q01081 240 aaKnown RBP eCLIP16.18■□□□□ 0.18
TPM4-212ENST00000590180 SLC16A10Q8TF71 515 aa16.18■□□□□ 0.18
TPM4-212ENST00000590180 LGR6Q9HBX8 967 aa16.18■□□□□ 0.18
TPM4-212ENST00000590180 AK7Q96M32 723 aa16.17■□□□□ 0.18
TPM4-212ENST00000590180 ITGB4P16144 1822 aa16.17■□□□□ 0.18
TPM4-212ENST00000590180 RNMTO43148 476 aaKnown RBP16.16■□□□□ 0.18
TPM4-212ENST00000590180 PTGER2P43116 358 aa16.16■□□□□ 0.18
TPM4-212ENST00000590180 COL23A1Q86Y22 540 aaPredicted RBP16.16■□□□□ 0.18
TPM4-212ENST00000590180 KDM6AO15550 1401 aaPredicted RBP16.15■□□□□ 0.18
TPM4-212ENST00000590180 PTCD1O75127 700 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms