RNA–Protein interactions for RNA: ENST00000589999.1

AC005394.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC005394.1, Length 1,269 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005394.1-201ENST00000589999 APAF1O14727 1248 aa13.32□□□□□ -0.28
AC005394.1-201ENST00000589999 NFE2L2Q16236 605 aa13.32□□□□□ -0.28
AC005394.1-201ENST00000589999 PHACTR3Q96KR7 559 aa13.32□□□□□ -0.28
AC005394.1-201ENST00000589999 MEGF6O75095 1541 aa13.32□□□□□ -0.28
AC005394.1-201ENST00000589999 TMPOP42166 694 aaKnown RBP13.31□□□□□ -0.28
AC005394.1-201ENST00000589999 CCDC27Q2M243 656 aa13.31□□□□□ -0.28
AC005394.1-201ENST00000589999 GJD4Q96KN9 370 aaPredicted RBP13.31□□□□□ -0.28
AC005394.1-201ENST00000589999 PHF23Q9BUL5 403 aaPredicted RBP13.31□□□□□ -0.28
AC005394.1-201ENST00000589999 USP35Q9P2H5 1018 aa13.31□□□□□ -0.28
AC005394.1-201ENST00000589999 SPG7Q9UQ90 795 aa13.31□□□□□ -0.28
AC005394.1-201ENST00000589999 CCDC9Q9Y3X0 531 aaKnown RBP13.31□□□□□ -0.28
AC005394.1-201ENST00000589999 PARP4Q9UKK3 1724 aaKnown RBP13.3□□□□□ -0.28
AC005394.1-201ENST00000589999 MTHFSDQ2M296 383 aaKnown RBP13.3□□□□□ -0.28
AC005394.1-201ENST00000589999 HTATSF1O43719 755 aaKnown RBP13.29□□□□□ -0.28
AC005394.1-201ENST00000589999 ONECUT3O60422 494 aaPredicted RBP13.29□□□□□ -0.28
AC005394.1-201ENST00000589999 HNRNPUQ00839 825 aaKnown RBP eCLIP13.29□□□□□ -0.284e-8■■□□□ 12.2
AC005394.1-201ENST00000589999 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
AC005394.1-201ENST00000589999 QTRT2Q9H974 415 aaKnown RBP13.29□□□□□ -0.28
AC005394.1-201ENST00000589999 RIPK4P57078 832 aa13.28□□□□□ -0.28
AC005394.1-201ENST00000589999 POTEDQ86YR6 584 aa13.28□□□□□ -0.28
AC005394.1-201ENST00000589999 ZCRB1Q8TBF4 217 aaKnown RBP13.28□□□□□ -0.28
AC005394.1-201ENST00000589999 PKD1L3Q7Z443 1732 aa13.27□□□□□ -0.28
AC005394.1-201ENST00000589999 AKAP4Q5JQC9 854 aa13.27□□□□□ -0.29
AC005394.1-201ENST00000589999 ZBED9Q6R2W3 1325 aa13.27□□□□□ -0.29
AC005394.1-201ENST00000589999 PCDH11XQ9BZA7 1347 aa13.27□□□□□ -0.29
AC005394.1-201ENST00000589999 PCDH11YQ9BZA8 1340 aa13.27□□□□□ -0.29
AC005394.1-201ENST00000589999 TNS2Q63HR2 1409 aa13.27□□□□□ -0.29
AC005394.1-201ENST00000589999 GLI3P10071 1580 aa13.27□□□□□ -0.29
AC005394.1-201ENST00000589999 WNK3Q9BYP7 1800 aa13.27□□□□□ -0.29
AC005394.1-201ENST00000589999 GNAT3A8MTJ3 354 aa13.26□□□□□ -0.29
AC005394.1-201ENST00000589999 EXOC5O00471 708 aa13.26□□□□□ -0.29
AC005394.1-201ENST00000589999 RBM6P78332 1123 aaKnown RBP13.26□□□□□ -0.29
AC005394.1-201ENST00000589999 DDB1Q16531 1140 aa13.26□□□□□ -0.29
AC005394.1-201ENST00000589999 C1orf141Q5JVX7 400 aa13.26□□□□□ -0.29
AC005394.1-201ENST00000589999 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
AC005394.1-201ENST00000589999 IFNL2Q8IZJ0 200 aa13.26□□□□□ -0.29
AC005394.1-201ENST00000589999 MAP3K5Q99683 1374 aa13.26□□□□□ -0.29
AC005394.1-201ENST00000589999 ZNF521Q96K83 1311 aa13.25□□□□□ -0.29
AC005394.1-201ENST00000589999 HSP90AB1P08238 724 aaKnown RBP13.25□□□□□ -0.29
AC005394.1-201ENST00000589999 PHKG2P15735 406 aa13.25□□□□□ -0.29
AC005394.1-201ENST00000589999 FAM98CQ17RN3 349 aaKnown RBP13.25□□□□□ -0.29
AC005394.1-201ENST00000589999 WWC1Q8IX03 1113 aa13.25□□□□□ -0.29
AC005394.1-201ENST00000589999 RTF1Q92541 710 aaKnown RBP13.25□□□□□ -0.29
AC005394.1-201ENST00000589999 TRIM35Q9UPQ4 493 aa13.25□□□□□ -0.29
AC005394.1-201ENST00000589999 RRP7AQ9Y3A4 280 aaKnown RBP13.25□□□□□ -0.29
AC005394.1-201ENST00000589999 THSD7AQ9UPZ6 1657 aa13.24□□□□□ -0.29
AC005394.1-201ENST00000589999 CALD1Q05682 793 aaKnown RBP13.24□□□□□ -0.29
AC005394.1-201ENST00000589999 NKX1-1Q15270 411 aaPredicted RBP13.24□□□□□ -0.29
AC005394.1-201ENST00000589999 NEUROD2Q15784 382 aa13.24□□□□□ -0.29
AC005394.1-201ENST00000589999 WDR63Q8IWG1 891 aa13.24□□□□□ -0.29
AC005394.1-201ENST00000589999 RGS17Q9UGC6 210 aaPredicted RBP13.24□□□□□ -0.29
AC005394.1-201ENST00000589999 CYP27B1O15528 508 aa13.23□□□□□ -0.29
AC005394.1-201ENST00000589999 PDE3BQ13370 1112 aa13.23□□□□□ -0.29
AC005394.1-201ENST00000589999 YTHDC1Q96MU7 727 aaKnown RBP13.23□□□□□ -0.29
AC005394.1-201ENST00000589999 CEMIPQ8WUJ3 1361 aa13.22□□□□□ -0.29
AC005394.1-201ENST00000589999 IL16Q14005 1332 aa13.22□□□□□ -0.29
AC005394.1-201ENST00000589999 LRRC37A3O60309 1634 aa13.22□□□□□ -0.29
AC005394.1-201ENST00000589999 RXRBP28702 533 aa13.22□□□□□ -0.29
AC005394.1-201ENST00000589999 DCAF5Q96JK2 942 aa13.22□□□□□ -0.29
AC005394.1-201ENST00000589999 DDX54Q8TDD1 881 aaKnown RBP13.21□□□□□ -0.29
AC005394.1-201ENST00000589999 SALL2Q9Y467 1007 aaPredicted RBP13.21□□□□□ -0.29
AC005394.1-201ENST00000589999 SHANK3Q9BYB0 1731 aa13.21□□□□□ -0.3
AC005394.1-201ENST00000589999 ADAMTS7Q9UKP4 1686 aa13.21□□□□□ -0.3
AC005394.1-201ENST00000589999 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
AC005394.1-201ENST00000589999 SEPT12Q8IYM1 358 aa13.2□□□□□ -0.3
AC005394.1-201ENST00000589999 IL17REQ8NFR9 667 aa13.2□□□□□ -0.3
AC005394.1-201ENST00000589999 BABAM1Q9NWV8 329 aa13.2□□□□□ -0.3
AC005394.1-201ENST00000589999 A0A0G2JS52 829 aa13.19□□□□□ -0.3
AC005394.1-201ENST00000589999 RNMTO43148 476 aaKnown RBP13.19□□□□□ -0.3
AC005394.1-201ENST00000589999 MYT1Q01538 1121 aa13.19□□□□□ -0.3
AC005394.1-201ENST00000589999 POTEAQ6S8J7 498 aa13.19□□□□□ -0.3
AC005394.1-201ENST00000589999 MPRIPQ6WCQ1 1025 aa13.19□□□□□ -0.3
AC005394.1-201ENST00000589999 BCL9O00512 1426 aa13.19□□□□□ -0.3
AC005394.1-201ENST00000589999 KDM6AO15550 1401 aaPredicted RBP13.19□□□□□ -0.3
AC005394.1-201ENST00000589999 DLG5Q8TDM6 1919 aa13.18□□□□□ -0.3
AC005394.1-201ENST00000589999 SENP3-EIF4A1A0A087X0R7 540 aa13.18□□□□□ -0.3
AC005394.1-201ENST00000589999 ERVV-2B6SEH9 535 aa13.18□□□□□ -0.3
AC005394.1-201ENST00000589999 DCTN1Q14203 1278 aa13.18□□□□□ -0.3
AC005394.1-201ENST00000589999 MCM10Q7L590 875 aa13.18□□□□□ -0.3
AC005394.1-201ENST00000589999 MARCH10Q8NA82 808 aaPredicted RBP13.18□□□□□ -0.3
AC005394.1-201ENST00000589999 IFT57Q9NWB7 429 aa13.18□□□□□ -0.3
AC005394.1-201ENST00000589999 MRC1P22897 1456 aa13.17□□□□□ -0.3
AC005394.1-201ENST00000589999 E9PSI1 815 aa13.17□□□□□ -0.3
AC005394.1-201ENST00000589999 GNAI1P63096 354 aa13.17□□□□□ -0.3
AC005394.1-201ENST00000589999 TEFQ10587 303 aa13.17□□□□□ -0.3
AC005394.1-201ENST00000589999 CFAP44Q96MT7 982 aa13.17□□□□□ -0.3
AC005394.1-201ENST00000589999 LGR6Q9HBX8 967 aa13.17□□□□□ -0.3
AC005394.1-201ENST00000589999 ZNF853P0CG23 659 aa13.16□□□□□ -0.3
AC005394.1-201ENST00000589999 THUMPD2Q9BTF0 503 aaKnown RBP13.16□□□□□ -0.3
AC005394.1-201ENST00000589999 MYH16Q9H6N6 1097 aa13.16□□□□□ -0.3
AC005394.1-201ENST00000589999 SLC52A2Q9HAB3 445 aa13.16□□□□□ -0.3
AC005394.1-201ENST00000589999 CHL1O00533 1208 aa13.15□□□□□ -0.3
AC005394.1-201ENST00000589999 SLFN5Q08AF3 891 aa13.15□□□□□ -0.3
AC005394.1-201ENST00000589999 TAF7Q15545 349 aaPredicted RBP13.15□□□□□ -0.3
AC005394.1-201ENST00000589999 KRT27Q7Z3Y8 459 aa13.15□□□□□ -0.3
AC005394.1-201ENST00000589999 TRMT2AQ8IZ69 625 aaKnown RBP13.15□□□□□ -0.3
AC005394.1-201ENST00000589999 SCN11AQ9UI33 1791 aa13.15□□□□□ -0.31
AC005394.1-201ENST00000589999 RGS12O14924 1447 aa13.14□□□□□ -0.31
AC005394.1-201ENST00000589999 CABP4P57796 275 aa13.14□□□□□ -0.31
AC005394.1-201ENST00000589999 CDCA7LQ96GN5 454 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms