RNA–Protein interactions for RNA: ENST00000588858.5

C19orf53-204, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 3

Gene C19orf53, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-204ENST00000588858 PLEKHF1Q96S99 279 aa10.77□□□□□ -0.69
C19orf53-204ENST00000588858 CCDC9Q9Y3X0 531 aaKnown RBP10.77□□□□□ -0.69
C19orf53-204ENST00000588858 RGS12O14924 1447 aa10.76□□□□□ -0.69
C19orf53-204ENST00000588858 U2SURPO15042 1029 aaKnown RBP10.76□□□□□ -0.69
C19orf53-204ENST00000588858 WDR43Q15061 677 aaKnown RBP eCLIP10.76□□□□□ -0.69
C19orf53-204ENST00000588858 FAM98CQ17RN3 349 aaKnown RBP10.76□□□□□ -0.69
C19orf53-204ENST00000588858 AEBP1Q8IUX7 1158 aa10.76□□□□□ -0.69
C19orf53-204ENST00000588858 USHBP1Q8N6Y0 703 aa10.76□□□□□ -0.69
C19orf53-204ENST00000588858 LRRC37A3O60309 1634 aa10.76□□□□□ -0.69
C19orf53-204ENST00000588858 EXOC5O00471 708 aa10.75□□□□□ -0.69
C19orf53-204ENST00000588858 NKX1-1Q15270 411 aaPredicted RBP10.75□□□□□ -0.69
C19orf53-204ENST00000588858 DDB1Q16531 1140 aa10.75□□□□□ -0.69
C19orf53-204ENST00000588858 PLEKHO1Q53GL0 409 aaPredicted RBP10.75□□□□□ -0.69
C19orf53-204ENST00000588858 SEPT12Q8IYM1 358 aa10.75□□□□□ -0.69
C19orf53-204ENST00000588858 ZCRB1Q8TBF4 217 aaKnown RBP10.75□□□□□ -0.69
C19orf53-204ENST00000588858 ADAMTS8Q9UP79 889 aa10.75□□□□□ -0.69
C19orf53-204ENST00000588858 SPG7Q9UQ90 795 aa10.75□□□□□ -0.69
C19orf53-204ENST00000588858 PCDH11XQ9BZA7 1347 aa10.75□□□□□ -0.69
C19orf53-204ENST00000588858 PCDH11YQ9BZA8 1340 aa10.75□□□□□ -0.69
C19orf53-204ENST00000588858 HMOX1P09601 288 aa10.74□□□□□ -0.69
C19orf53-204ENST00000588858 PRKAR2BP31323 418 aa10.74□□□□□ -0.69
C19orf53-204ENST00000588858 NGEFQ8N5V2 710 aa10.74□□□□□ -0.69
C19orf53-204ENST00000588858 GAS2L2Q8NHY3 880 aa10.74□□□□□ -0.69
C19orf53-204ENST00000588858 USP35Q9P2H5 1018 aa10.74□□□□□ -0.69
C19orf53-204ENST00000588858 HTATSF1O43719 755 aaKnown RBP10.73□□□□□ -0.69
C19orf53-204ENST00000588858 RUNDC1Q96C34 613 aa10.73□□□□□ -0.69
C19orf53-204ENST00000588858 ADAMTS7Q9UKP4 1686 aa10.73□□□□□ -0.69
C19orf53-204ENST00000588858 SHANK3Q9BYB0 1731 aa10.72□□□□□ -0.69
C19orf53-204ENST00000588858 CYP27B1O15528 508 aa10.72□□□□□ -0.69
C19orf53-204ENST00000588858 AKAP4Q5JQC9 854 aa10.72□□□□□ -0.69
C19orf53-204ENST00000588858 IFNL2Q8IZJ0 200 aa10.72□□□□□ -0.69
C19orf53-204ENST00000588858 PHACTR3Q96KR7 559 aa10.72□□□□□ -0.69
C19orf53-204ENST00000588858 NEFMP07197 916 aa10.71□□□□□ -0.69
C19orf53-204ENST00000588858 HSP90AB1P08238 724 aaKnown RBP10.71□□□□□ -0.69
C19orf53-204ENST00000588858 PHKG2P15735 406 aa10.71□□□□□ -0.69
C19orf53-204ENST00000588858 MTHFSDQ2M296 383 aaKnown RBP10.71□□□□□ -0.69
C19orf53-204ENST00000588858 KRT27Q7Z3Y8 459 aa10.71□□□□□ -0.69
C19orf53-204ENST00000588858 MARCH10Q8NA82 808 aaPredicted RBP10.71□□□□□ -0.69
C19orf53-204ENST00000588858 CEMIPQ8WUJ3 1361 aa10.7□□□□□ -0.7
C19orf53-204ENST00000588858 MAPK8IP3Q9UPT6 1336 aa10.7□□□□□ -0.7
C19orf53-204ENST00000588858 PDE3BQ13370 1112 aa10.7□□□□□ -0.7
C19orf53-204ENST00000588858 NFE2L2Q16236 605 aa10.7□□□□□ -0.7
C19orf53-204ENST00000588858 CCDC27Q2M243 656 aa10.7□□□□□ -0.7
C19orf53-204ENST00000588858 MAP3K5Q99683 1374 aa10.69□□□□□ -0.7
C19orf53-204ENST00000588858 ZNF530Q6P9A1 599 aaPredicted RBP10.69□□□□□ -0.7
C19orf53-204ENST00000588858 FAM196AQ6ZSG2 479 aa10.69□□□□□ -0.7
C19orf53-204ENST00000588858 DCAF5Q96JK2 942 aa10.69□□□□□ -0.7
C19orf53-204ENST00000588858 BRWD3Q6RI45 1802 aa10.69□□□□□ -0.7
C19orf53-204ENST00000588858 MRC1P22897 1456 aa10.68□□□□□ -0.7
C19orf53-204ENST00000588858 GNAT3A8MTJ3 354 aa10.68□□□□□ -0.7
C19orf53-204ENST00000588858 ERVV-2B6SEH9 535 aa10.68□□□□□ -0.7
C19orf53-204ENST00000588858 TMPOP42166 694 aaKnown RBP10.68□□□□□ -0.7
C19orf53-204ENST00000588858 LMOD3Q0VAK6 560 aa10.68□□□□□ -0.7
C19orf53-204ENST00000588858 C1orf141Q5JVX7 400 aa10.68□□□□□ -0.7
C19orf53-204ENST00000588858 KDM6AO15550 1401 aaPredicted RBP10.67□□□□□ -0.7
C19orf53-204ENST00000588858 A0A0G2JS52 829 aa10.66□□□□□ -0.7
C19orf53-204ENST00000588858 MYT1Q01538 1121 aa10.66□□□□□ -0.7
C19orf53-204ENST00000588858 FAM9BQ8IZU0 186 aa10.66□□□□□ -0.7
C19orf53-204ENST00000588858 DDX54Q8TDD1 881 aaKnown RBP10.66□□□□□ -0.7
C19orf53-204ENST00000588858 BABAM1Q9NWV8 329 aa10.66□□□□□ -0.7
C19orf53-204ENST00000588858 APAF1O14727 1248 aa10.65□□□□□ -0.7
C19orf53-204ENST00000588858 RNMTO43148 476 aaKnown RBP10.65□□□□□ -0.7
C19orf53-204ENST00000588858 CCDC125Q86Z20 511 aa10.65□□□□□ -0.7
C19orf53-204ENST00000588858 EP400Q96L91 3159 aa10.65□□□□□ -0.7
C19orf53-204ENST00000588858 SCN11AQ9UI33 1791 aa10.65□□□□□ -0.71
C19orf53-204ENST00000588858 NHSQ6T4R5 1651 aa10.64□□□□□ -0.71
C19orf53-204ENST00000588858 RIPK4P57078 832 aa10.64□□□□□ -0.71
C19orf53-204ENST00000588858 CCDC146Q8IYE0 955 aa10.64□□□□□ -0.71
C19orf53-204ENST00000588858 IL17REQ8NFR9 667 aa10.64□□□□□ -0.71
C19orf53-204ENST00000588858 BCL11BQ9C0K0 894 aaPredicted RBP10.64□□□□□ -0.71
C19orf53-204ENST00000588858 TRIM35Q9UPQ4 493 aa10.64□□□□□ -0.71
C19orf53-204ENST00000588858 TOGARAM1Q9Y4F4 1720 aa10.64□□□□□ -0.71
C19orf53-204ENST00000588858 SBF2Q86WG5 1849 aa10.63□□□□□ -0.71
C19orf53-204ENST00000588858 IL16Q14005 1332 aa10.63□□□□□ -0.71
C19orf53-204ENST00000588858 ZNF521Q96K83 1311 aa10.63□□□□□ -0.71
C19orf53-204ENST00000588858 RTF1Q92541 710 aaKnown RBP10.63□□□□□ -0.71
C19orf53-204ENST00000588858 SLC52A2Q9HAB3 445 aa10.63□□□□□ -0.71
C19orf53-204ENST00000588858 CALD1Q05682 793 aaKnown RBP10.62□□□□□ -0.71
C19orf53-204ENST00000588858 MPRIPQ6WCQ1 1025 aa10.62□□□□□ -0.71
C19orf53-204ENST00000588858 WDR63Q8IWG1 891 aa10.62□□□□□ -0.71
C19orf53-204ENST00000588858 DLG5Q8TDM6 1919 aa10.62□□□□□ -0.71
C19orf53-204ENST00000588858 DOT1LQ8TEK3 1739 aa10.61□□□□□ -0.71
C19orf53-204ENST00000588858 PLSCR1O15162 318 aa10.61□□□□□ -0.71
C19orf53-204ENST00000588858 WWC1Q8IX03 1113 aa10.61□□□□□ -0.71
C19orf53-204ENST00000588858 LGR6Q9HBX8 967 aa10.61□□□□□ -0.71
C19orf53-204ENST00000588858 RGPD3A6NKT7 1758 aaPredicted RBP10.61□□□□□ -0.71
C19orf53-204ENST00000588858 SIPA1L3O60292 1781 aaPredicted RBP10.61□□□□□ -0.71
C19orf53-204ENST00000588858 RGPD4Q7Z3J3 1758 aa10.61□□□□□ -0.71
C19orf53-204ENST00000588858 ZNF853P0CG23 659 aa10.6□□□□□ -0.71
C19orf53-204ENST00000588858 HMGB2P26583 209 aaKnown RBP10.6□□□□□ -0.71
C19orf53-204ENST00000588858 PRIM1P49642 420 aaKnown RBP10.6□□□□□ -0.71
C19orf53-204ENST00000588858 TEFQ10587 303 aa10.6□□□□□ -0.71
C19orf53-204ENST00000588858 TAF7Q15545 349 aaPredicted RBP10.6□□□□□ -0.71
C19orf53-204ENST00000588858 PIGBQ92521 554 aa10.6□□□□□ -0.71
C19orf53-204ENST00000588858 TMOD3Q9NYL9 352 aa10.6□□□□□ -0.71
C19orf53-204ENST00000588858 ZNF831Q5JPB2 1677 aa10.6□□□□□ -0.71
C19orf53-204ENST00000588858 PAPPAQ13219 1627 aa10.59□□□□□ -0.71
C19orf53-204ENST00000588858 CICQ96RK0 1608 aaPredicted RBP10.59□□□□□ -0.71
C19orf53-204ENST00000588858 ITGB4P16144 1822 aa10.59□□□□□ -0.71
C19orf53-204ENST00000588858 CHL1O00533 1208 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms