RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 CT47B1P0C2W7 299 aaPredicted RBP13.74□□□□□ -0.21
NEDD4L-224ENST00000588712 IFT57Q9NWB7 429 aa13.74□□□□□ -0.21
NEDD4L-224ENST00000588712 AKAP4Q5JQC9 854 aa13.73□□□□□ -0.21
NEDD4L-224ENST00000588712 C1orf141Q5JVX7 400 aa13.73□□□□□ -0.21
NEDD4L-224ENST00000588712 RGPD2P0DJD1 1756 aa13.73□□□□□ -0.21
NEDD4L-224ENST00000588712 CRB1P82279 1406 aa13.73□□□□□ -0.21
NEDD4L-224ENST00000588712 CFAP44Q96MT7 982 aa13.73□□□□□ -0.21
NEDD4L-224ENST00000588712 STRN4Q9NRL3 753 aa13.73□□□□□ -0.21
NEDD4L-224ENST00000588712 MAP3K5Q99683 1374 aa13.73□□□□□ -0.21
NEDD4L-224ENST00000588712 DLG5Q8TDM6 1919 aa13.72□□□□□ -0.21
NEDD4L-224ENST00000588712 NUTM2BA6NNL0 878 aaPredicted RBP13.72□□□□□ -0.21
NEDD4L-224ENST00000588712 NUTM2EB1AL46 878 aaPredicted RBP13.72□□□□□ -0.21
NEDD4L-224ENST00000588712 NUTM2AQ8IVF1 878 aaPredicted RBP13.72□□□□□ -0.21
NEDD4L-224ENST00000588712 BABAM1Q9NWV8 329 aa13.72□□□□□ -0.21
NEDD4L-224ENST00000588712 RCAN3Q9UKA8 241 aa13.72□□□□□ -0.21
NEDD4L-224ENST00000588712 ADAMTS2O95450 1211 aa13.71□□□□□ -0.21
NEDD4L-224ENST00000588712 NEFLP07196 543 aa13.71□□□□□ -0.21
NEDD4L-224ENST00000588712 ZNF530Q6P9A1 599 aaPredicted RBP13.71□□□□□ -0.21
NEDD4L-224ENST00000588712 SPINK5Q9NQ38 1064 aaPredicted RBP13.71□□□□□ -0.21
NEDD4L-224ENST00000588712 HSP90AB1P08238 724 aaKnown RBP13.7□□□□□ -0.22
NEDD4L-224ENST00000588712 IL2RBP14784 551 aa13.7□□□□□ -0.22
NEDD4L-224ENST00000588712 HSPA1LP34931 641 aa13.7□□□□□ -0.22
NEDD4L-224ENST00000588712 LARP1Q6PKG0 1096 aaKnown RBP13.7□□□□□ -0.22
NEDD4L-224ENST00000588712 CDCA7Q9BWT1 371 aaPredicted RBP13.7□□□□□ -0.22
NEDD4L-224ENST00000588712 ZNF853P0CG23 659 aa13.7□□□□□ -0.22
NEDD4L-224ENST00000588712 THRAP3Q9Y2W1 955 aaKnown RBP13.7□□□□□ -0.22
NEDD4L-224ENST00000588712 SUPT16HQ9Y5B9 1047 aaKnown RBP13.7□□□□□ -0.22
NEDD4L-224ENST00000588712 IFNL2Q8IZJ0 200 aa13.69□□□□□ -0.22
NEDD4L-224ENST00000588712 ZNF428Q96B54 188 aa13.69□□□□□ -0.22
NEDD4L-224ENST00000588712 OVOS2A0A0G2JMS6 1433 aa13.68□□□□□ -0.22
NEDD4L-224ENST00000588712 MCM10Q7L590 875 aa13.68□□□□□ -0.22
NEDD4L-224ENST00000588712 NWD2Q9ULI1 1742 aa13.68□□□□□ -0.22
NEDD4L-224ENST00000588712 FANCIQ9NVI1 1328 aa13.68□□□□□ -0.22
NEDD4L-224ENST00000588712 NGLY1Q96IV0 654 aa13.68□□□□□ -0.22
NEDD4L-224ENST00000588712 LAS1LQ9Y4W2 734 aaKnown RBP13.68□□□□□ -0.22
NEDD4L-224ENST00000588712 PARP4Q9UKK3 1724 aaKnown RBP13.67□□□□□ -0.22
NEDD4L-224ENST00000588712 CHL1O00533 1208 aa13.67□□□□□ -0.22
NEDD4L-224ENST00000588712 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.67□□□□□ -0.22
NEDD4L-224ENST00000588712 PLCH1Q4KWH8 1693 aa13.67□□□□□ -0.22
NEDD4L-224ENST00000588712 DCTN1Q14203 1278 aa13.67□□□□□ -0.22
NEDD4L-224ENST00000588712 TAF7Q15545 349 aaPredicted RBP13.67□□□□□ -0.22
NEDD4L-224ENST00000588712 ZCRB1Q8TBF4 217 aaKnown RBP13.67□□□□□ -0.22
NEDD4L-224ENST00000588712 SLIT2O94813 1529 aa13.67□□□□□ -0.22
NEDD4L-224ENST00000588712 PCDH11XQ9BZA7 1347 aa13.66□□□□□ -0.22
NEDD4L-224ENST00000588712 PCDH11YQ9BZA8 1340 aa13.66□□□□□ -0.22
NEDD4L-224ENST00000588712 UNC5CLQ8IV45 518 aa13.66□□□□□ -0.22
NEDD4L-224ENST00000588712 IL17REQ8NFR9 667 aa13.66□□□□□ -0.22
NEDD4L-224ENST00000588712 THUMPD2Q9BTF0 503 aaKnown RBP13.66□□□□□ -0.22
NEDD4L-224ENST00000588712 RNF123Q5XPI4 1314 aa13.66□□□□□ -0.22
NEDD4L-224ENST00000588712 CEMIPQ8WUJ3 1361 aa13.66□□□□□ -0.22
NEDD4L-224ENST00000588712 MEGF6O75095 1541 aa13.65□□□□□ -0.22
NEDD4L-224ENST00000588712 TEFQ10587 303 aa13.65□□□□□ -0.22
NEDD4L-224ENST00000588712 FNBP4Q8N3X1 1017 aaPredicted RBP13.65□□□□□ -0.22
NEDD4L-224ENST00000588712 DCAF5Q96JK2 942 aa13.65□□□□□ -0.22
NEDD4L-224ENST00000588712 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
NEDD4L-224ENST00000588712 PHKG2P15735 406 aa13.65□□□□□ -0.22
NEDD4L-224ENST00000588712 MEX3CQ5U5Q3 659 aaKnown RBP13.65□□□□□ -0.22
NEDD4L-224ENST00000588712 TSR2Q969E8 191 aaKnown RBP13.65□□□□□ -0.22
NEDD4L-224ENST00000588712 MBIPQ9NS73 344 aa13.65□□□□□ -0.22
NEDD4L-224ENST00000588712 PKD1L3Q7Z443 1732 aa13.64□□□□□ -0.23
NEDD4L-224ENST00000588712 RNMTO43148 476 aaKnown RBP13.64□□□□□ -0.23
NEDD4L-224ENST00000588712 ERICH6BQ5W0A0 696 aa13.64□□□□□ -0.23
NEDD4L-224ENST00000588712 C8orf37Q96NL8 207 aa13.64□□□□□ -0.23
NEDD4L-224ENST00000588712 SOS1Q07889 1333 aaPredicted RBP13.64□□□□□ -0.23
NEDD4L-224ENST00000588712 EXOSC9Q06265 439 aaKnown RBP13.63□□□□□ -0.23
NEDD4L-224ENST00000588712 USP35Q9P2H5 1018 aa13.63□□□□□ -0.23
NEDD4L-224ENST00000588712 TSPYL4Q9UJ04 414 aa13.63□□□□□ -0.23
NEDD4L-224ENST00000588712 SPATA31A1Q5TZJ5 1347 aa13.63□□□□□ -0.23
NEDD4L-224ENST00000588712 SPATA31A5Q5VU36 1347 aa13.63□□□□□ -0.23
NEDD4L-224ENST00000588712 SPATA31A7Q8IWB4 1347 aa13.63□□□□□ -0.23
NEDD4L-224ENST00000588712 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
NEDD4L-224ENST00000588712 GTF3C3Q9Y5Q9 886 aa13.63□□□□□ -0.23
NEDD4L-224ENST00000588712 EXOC5O00471 708 aa13.62□□□□□ -0.23
NEDD4L-224ENST00000588712 VPS72Q15906 364 aa13.62□□□□□ -0.23
NEDD4L-224ENST00000588712 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
NEDD4L-224ENST00000588712 NRAPQ86VF7 1730 aa13.62□□□□□ -0.23
NEDD4L-224ENST00000588712 LRRC37A3O60309 1634 aa13.62□□□□□ -0.23
NEDD4L-224ENST00000588712 NKX1-1Q15270 411 aaPredicted RBP13.62□□□□□ -0.23
NEDD4L-224ENST00000588712 ALDH1L2Q3SY69 923 aa13.62□□□□□ -0.23
NEDD4L-224ENST00000588712 LGR6Q9HBX8 967 aa13.62□□□□□ -0.23
NEDD4L-224ENST00000588712 RRP1P56182 461 aaKnown RBP13.61□□□□□ -0.23
NEDD4L-224ENST00000588712 USP21Q9UK80 565 aa13.61□□□□□ -0.23
NEDD4L-224ENST00000588712 CCDC9Q9Y3X0 531 aaKnown RBP13.61□□□□□ -0.23
NEDD4L-224ENST00000588712 CYP27B1O15528 508 aa13.6□□□□□ -0.23
NEDD4L-224ENST00000588712 RARSP54136 660 aaKnown RBP13.6□□□□□ -0.23
NEDD4L-224ENST00000588712 DISP2A7MBM2 1401 aa13.6□□□□□ -0.23
NEDD4L-224ENST00000588712 BTBD11A6QL63 1104 aa13.6□□□□□ -0.23
NEDD4L-224ENST00000588712 ERVV-2B6SEH9 535 aa13.6□□□□□ -0.23
NEDD4L-224ENST00000588712 TWISTNBQ3B726 338 aaPredicted RBP13.6□□□□□ -0.23
NEDD4L-224ENST00000588712 ADAMTS7Q9UKP4 1686 aa13.6□□□□□ -0.23
NEDD4L-224ENST00000588712 BCL9LQ86UU0 1499 aa13.59□□□□□ -0.23
NEDD4L-224ENST00000588712 SLC52A2Q9HAB3 445 aa13.59□□□□□ -0.23
NEDD4L-224ENST00000588712 LRP6O75581 1613 aa13.59□□□□□ -0.23
NEDD4L-224ENST00000588712 VAMP4O75379 141 aa13.59□□□□□ -0.23
NEDD4L-224ENST00000588712 MS4A1P11836 297 aa13.59□□□□□ -0.23
NEDD4L-224ENST00000588712 PRKCSHP14314 528 aaPredicted RBP13.59□□□□□ -0.23
NEDD4L-224ENST00000588712 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.58□□□□□ -0.23
NEDD4L-224ENST00000588712 DDX54Q8TDD1 881 aaKnown RBP13.58□□□□□ -0.24
NEDD4L-224ENST00000588712 IPO8O15397 1037 aaKnown RBP13.57□□□□□ -0.24
NEDD4L-224ENST00000588712 HOXB7P09629 217 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms