RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 PHF23Q9BUL5 403 aaPredicted RBP18.39■□□□□ 0.53
NLE1-205ENST00000588642 SPG7Q9UQ90 795 aa18.39■□□□□ 0.53
NLE1-205ENST00000588642 ZNF521Q96K83 1311 aa18.39■□□□□ 0.53
NLE1-205ENST00000588642 IL2RBP14784 551 aa18.38■□□□□ 0.53
NLE1-205ENST00000588642 RTF1Q92541 710 aaKnown RBP18.38■□□□□ 0.53
NLE1-205ENST00000588642 USP21Q9UK80 565 aa18.38■□□□□ 0.53
NLE1-205ENST00000588642 CDCA7LQ96GN5 454 aa18.37■□□□□ 0.53
NLE1-205ENST00000588642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.37■□□□□ 0.53
NLE1-205ENST00000588642 GNAT3A8MTJ3 354 aa18.36■□□□□ 0.53
NLE1-205ENST00000588642 HTATSF1O43719 755 aaKnown RBP18.36■□□□□ 0.53
NLE1-205ENST00000588642 C1orf141Q5JVX7 400 aa18.36■□□□□ 0.53
NLE1-205ENST00000588642 RGPD2P0DJD1 1756 aa18.35■□□□□ 0.53
NLE1-205ENST00000588642 FAM208AQ9UK61 1670 aaKnown RBP18.35■□□□□ 0.53
NLE1-205ENST00000588642 AFF2P51816 1311 aa18.35■□□□□ 0.53
NLE1-205ENST00000588642 SPATA31A1Q5TZJ5 1347 aa18.35■□□□□ 0.53
NLE1-205ENST00000588642 SPATA31A5Q5VU36 1347 aa18.35■□□□□ 0.53
NLE1-205ENST00000588642 SPATA31A7Q8IWB4 1347 aa18.35■□□□□ 0.53
NLE1-205ENST00000588642 CALD1Q05682 793 aaKnown RBP18.35■□□□□ 0.53
NLE1-205ENST00000588642 DCTN1Q14203 1278 aa18.35■□□□□ 0.53
NLE1-205ENST00000588642 VPS72Q15906 364 aa18.35■□□□□ 0.53
NLE1-205ENST00000588642 ZCRB1Q8TBF4 217 aaKnown RBP18.35■□□□□ 0.53
NLE1-205ENST00000588642 THUMPD2Q9BTF0 503 aaKnown RBP18.35■□□□□ 0.53
NLE1-205ENST00000588642 MEGF6O75095 1541 aa18.34■□□□□ 0.53
NLE1-205ENST00000588642 SLFN5Q08AF3 891 aa18.34■□□□□ 0.53
NLE1-205ENST00000588642 AKAP4Q5JQC9 854 aa18.34■□□□□ 0.53
NLE1-205ENST00000588642 MCM10Q7L590 875 aa18.34■□□□□ 0.53
NLE1-205ENST00000588642 THRAP3Q9Y2W1 955 aaKnown RBP18.34■□□□□ 0.53
NLE1-205ENST00000588642 BCL9LQ86UU0 1499 aa18.33■□□□□ 0.53
NLE1-205ENST00000588642 MAP3K5Q99683 1374 aa18.33■□□□□ 0.53
NLE1-205ENST00000588642 E9PSI1 815 aa18.33■□□□□ 0.52
NLE1-205ENST00000588642 PLEKHG2Q9H7P9 1386 aa18.32■□□□□ 0.52
NLE1-205ENST00000588642 PLCH1Q4KWH8 1693 aa18.32■□□□□ 0.52
NLE1-205ENST00000588642 IL16Q14005 1332 aa18.32■□□□□ 0.52
NLE1-205ENST00000588642 CDCA7Q9BWT1 371 aaPredicted RBP18.32■□□□□ 0.52
NLE1-205ENST00000588642 SPINK5Q9NQ38 1064 aaPredicted RBP18.32■□□□□ 0.52
NLE1-205ENST00000588642 LAS1LQ9Y4W2 734 aaKnown RBP18.32■□□□□ 0.52
NLE1-205ENST00000588642 OVOS2A0A0G2JMS6 1433 aa18.32■□□□□ 0.52
NLE1-205ENST00000588642 IFNL2Q8IZJ0 200 aa18.31■□□□□ 0.52
NLE1-205ENST00000588642 MPRIPQ6WCQ1 1025 aa18.3■□□□□ 0.52
NLE1-205ENST00000588642 IL17REQ8NFR9 667 aa18.3■□□□□ 0.52
NLE1-205ENST00000588642 DDX54Q8TDD1 881 aaKnown RBP18.3■□□□□ 0.52
NLE1-205ENST00000588642 MYH16Q9H6N6 1097 aa18.3■□□□□ 0.52
NLE1-205ENST00000588642 EXOC5O00471 708 aa18.29■□□□□ 0.52
NLE1-205ENST00000588642 PHKG2P15735 406 aa18.29■□□□□ 0.52
NLE1-205ENST00000588642 BARGINQ6ZT62 677 aa18.29■□□□□ 0.52
NLE1-205ENST00000588642 LGR6Q9HBX8 967 aa18.29■□□□□ 0.52
NLE1-205ENST00000588642 NWD2Q9ULI1 1742 aa18.29■□□□□ 0.52
NLE1-205ENST00000588642 PCDH11XQ9BZA7 1347 aa18.28■□□□□ 0.52
NLE1-205ENST00000588642 PCDH11YQ9BZA8 1340 aa18.28■□□□□ 0.52
NLE1-205ENST00000588642 CYP27B1O15528 508 aa18.28■□□□□ 0.52
NLE1-205ENST00000588642 HSP90AB1P08238 724 aaKnown RBP18.28■□□□□ 0.52
NLE1-205ENST00000588642 GNAI1P63096 354 aa18.28■□□□□ 0.52
NLE1-205ENST00000588642 TRMT2AQ8IZ69 625 aaKnown RBP18.28■□□□□ 0.52
NLE1-205ENST00000588642 QTRT2Q9H974 415 aaKnown RBP18.28■□□□□ 0.52
NLE1-205ENST00000588642 TRPC5Q9UL62 973 aaPredicted RBP18.28■□□□□ 0.52
NLE1-205ENST00000588642 NRAPQ86VF7 1730 aa18.27■□□□□ 0.52
NLE1-205ENST00000588642 RNMTO43148 476 aaKnown RBP18.27■□□□□ 0.52
NLE1-205ENST00000588642 FAM98CQ17RN3 349 aaKnown RBP18.27■□□□□ 0.52
NLE1-205ENST00000588642 DUSP27Q5VZP5 1158 aa18.27■□□□□ 0.52
NLE1-205ENST00000588642 IFT57Q9NWB7 429 aa18.27■□□□□ 0.52
NLE1-205ENST00000588642 DISP2A7MBM2 1401 aa18.26■□□□□ 0.51
NLE1-205ENST00000588642 GJD4Q96KN9 370 aaPredicted RBP18.26■□□□□ 0.51
NLE1-205ENST00000588642 CFAP44Q96MT7 982 aa18.26■□□□□ 0.51
NLE1-205ENST00000588642 TEFQ10587 303 aa18.25■□□□□ 0.51
NLE1-205ENST00000588642 DDB1Q16531 1140 aa18.25■□□□□ 0.51
NLE1-205ENST00000588642 TSR2Q969E8 191 aaKnown RBP18.25■□□□□ 0.51
NLE1-205ENST00000588642 DCAF5Q96JK2 942 aa18.25■□□□□ 0.51
NLE1-205ENST00000588642 A0A0G2JS52 829 aa18.24■□□□□ 0.51
NLE1-205ENST00000588642 ZNF853P0CG23 659 aa18.24■□□□□ 0.51
NLE1-205ENST00000588642 MYT1Q01538 1121 aa18.24■□□□□ 0.51
NLE1-205ENST00000588642 TAF7Q15545 349 aaPredicted RBP18.24■□□□□ 0.51
NLE1-205ENST00000588642 CHL1O00533 1208 aa18.23■□□□□ 0.51
NLE1-205ENST00000588642 ZNF772Q68DY9 489 aaPredicted RBP18.23■□□□□ 0.51
NLE1-205ENST00000588642 ATRNO75882 1429 aa18.23■□□□□ 0.51
NLE1-205ENST00000588642 FANCIQ9NVI1 1328 aa18.23■□□□□ 0.51
NLE1-205ENST00000588642 NKX1-1Q15270 411 aaPredicted RBP18.22■□□□□ 0.51
NLE1-205ENST00000588642 MBIPQ9NS73 344 aa18.22■□□□□ 0.51
NLE1-205ENST00000588642 MIS18AQ9NYP9 233 aa18.22■□□□□ 0.51
NLE1-205ENST00000588642 PARP4Q9UKK3 1724 aaKnown RBP18.21■□□□□ 0.51
NLE1-205ENST00000588642 CEMIPQ8WUJ3 1361 aa18.21■□□□□ 0.51
NLE1-205ENST00000588642 TSPYL4Q9UJ04 414 aa18.21■□□□□ 0.51
NLE1-205ENST00000588642 CABP4P57796 275 aa18.2■□□□□ 0.5
NLE1-205ENST00000588642 EXOSC9Q06265 439 aaKnown RBP18.2■□□□□ 0.5
NLE1-205ENST00000588642 SLC52A2Q9HAB3 445 aa18.19■□□□□ 0.5
NLE1-205ENST00000588642 BABAM1Q9NWV8 329 aa18.19■□□□□ 0.5
NLE1-205ENST00000588642 KDM6AO15550 1401 aaPredicted RBP18.18■□□□□ 0.5
NLE1-205ENST00000588642 TNS2Q63HR2 1409 aa18.18■□□□□ 0.5
NLE1-205ENST00000588642 BTBD11A6QL63 1104 aa18.18■□□□□ 0.5
NLE1-205ENST00000588642 ERVV-2B6SEH9 535 aa18.18■□□□□ 0.5
NLE1-205ENST00000588642 NFATC2IPQ8NCF5 419 aa18.18■□□□□ 0.5
NLE1-205ENST00000588642 PKD1L3Q7Z443 1732 aa18.18■□□□□ 0.5
NLE1-205ENST00000588642 DLG5Q8TDM6 1919 aa18.17■□□□□ 0.5
NLE1-205ENST00000588642 ONECUT3O60422 494 aaPredicted RBP18.17■□□□□ 0.5
NLE1-205ENST00000588642 RCAN3Q9UKA8 241 aa18.17■□□□□ 0.5
NLE1-205ENST00000588642 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.17■□□□□ 0.5
NLE1-205ENST00000588642 SEPT12Q8IYM1 358 aa18.16■□□□□ 0.5
NLE1-205ENST00000588642 MARCH10Q8NA82 808 aaPredicted RBP18.16■□□□□ 0.5
NLE1-205ENST00000588642 RBM6P78332 1123 aaKnown RBP18.15■□□□□ 0.5
NLE1-205ENST00000588642 ELL2O00472 640 aaPredicted RBP18.14■□□□□ 0.49
NLE1-205ENST00000588642 CT47B1P0C2W7 299 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms