RNA–Protein interactions for RNA: ENST00000588352.5

GHDC-208, Transcript of GH3 domain containing, humanhuman

TSL 5

Gene GHDC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-208ENST00000588352 ZCRB1Q8TBF4 217 aaKnown RBP23.05■■□□□ 1.28
GHDC-208ENST00000588352 TNS1Q9HBL0 1735 aaKnown RBP23.05■■□□□ 1.28
GHDC-208ENST00000588352 PKD1L3Q7Z443 1732 aa23.04■■□□□ 1.28
GHDC-208ENST00000588352 SHANK3Q9BYB0 1731 aa23.03■■□□□ 1.28
GHDC-208ENST00000588352 PCDH11XQ9BZA7 1347 aa23.03■■□□□ 1.28
GHDC-208ENST00000588352 PCDH11YQ9BZA8 1340 aa23.03■■□□□ 1.28
GHDC-208ENST00000588352 DIAPH1O60610 1272 aaKnown RBP23.02■■□□□ 1.28
GHDC-208ENST00000588352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.02■■□□□ 1.28
GHDC-208ENST00000588352 TRIM37O94972 964 aa23.01■■□□□ 1.27
GHDC-208ENST00000588352 CFAP53Q96M91 514 aa23.01■■□□□ 1.27
GHDC-208ENST00000588352 BAG6P46379 1132 aa23■■□□□ 1.27
GHDC-208ENST00000588352 RALBP1Q15311 655 aa23■■□□□ 1.27
GHDC-208ENST00000588352 NHSQ6T4R5 1651 aa22.99■■□□□ 1.27
GHDC-208ENST00000588352 DDX54Q8TDD1 881 aaKnown RBP22.98■■□□□ 1.27
GHDC-208ENST00000588352 BCL11BQ9C0K0 894 aaPredicted RBP22.98■■□□□ 1.27
GHDC-208ENST00000588352 SPG7Q9UQ90 795 aa22.98■■□□□ 1.27
GHDC-208ENST00000588352 SULT6B1Q6IMI4 303 aa22.97■■□□□ 1.27
GHDC-208ENST00000588352 AEBP1Q8IUX7 1158 aa22.97■■□□□ 1.27
GHDC-208ENST00000588352 DEFB132Q7Z7B7 95 aa22.95■■□□□ 1.26
GHDC-208ENST00000588352 CYP27B1O15528 508 aa22.94■■□□□ 1.26
GHDC-208ENST00000588352 RGPD3A6NKT7 1758 aaPredicted RBP22.94■■□□□ 1.26
GHDC-208ENST00000588352 RGPD4Q7Z3J3 1758 aa22.94■■□□□ 1.26
GHDC-208ENST00000588352 MYBBP1AQ9BQG0 1328 aaKnown RBP22.93■■□□□ 1.26
GHDC-208ENST00000588352 AMOTQ4VCS5 1084 aa22.93■■□□□ 1.26
GHDC-208ENST00000588352 SBF2Q86WG5 1849 aa22.92■■□□□ 1.26
GHDC-208ENST00000588352 APBA3O96018 575 aa22.92■■□□□ 1.26
GHDC-208ENST00000588352 NKX1-1Q15270 411 aaPredicted RBP22.91■■□□□ 1.26
GHDC-208ENST00000588352 NUDCQ9Y266 331 aa22.91■■□□□ 1.26
GHDC-208ENST00000588352 DOT1LQ8TEK3 1739 aa22.91■■□□□ 1.26
GHDC-208ENST00000588352 PHKG2P15735 406 aa22.9■■□□□ 1.26
GHDC-208ENST00000588352 PLEKHO1Q53GL0 409 aaPredicted RBP22.9■■□□□ 1.26
GHDC-208ENST00000588352 PRKRIP1Q9H875 184 aaPredicted RBP22.9■■□□□ 1.26
GHDC-208ENST00000588352 U2SURPO15042 1029 aaKnown RBP22.89■■□□□ 1.25
GHDC-208ENST00000588352 KCNQ2O43526 872 aa22.89■■□□□ 1.25
GHDC-208ENST00000588352 EN1Q05925 392 aaPredicted RBP22.89■■□□□ 1.25
GHDC-208ENST00000588352 PTF1AQ7RTS3 328 aa22.89■■□□□ 1.25
GHDC-208ENST00000588352 IFNL2Q8IZJ0 200 aa22.89■■□□□ 1.25
GHDC-208ENST00000588352 ACSBG1Q96GR2 724 aa22.89■■□□□ 1.25
GHDC-208ENST00000588352 CAMKK2Q96RR4 588 aa22.89■■□□□ 1.25
GHDC-208ENST00000588352 PLSCR1O15162 318 aa22.88■■□□□ 1.25
GHDC-208ENST00000588352 HMOX1P09601 288 aa22.88■■□□□ 1.25
GHDC-208ENST00000588352 RREB1Q92766 1687 aa22.87■■□□□ 1.25
GHDC-208ENST00000588352 HSP90AB1P08238 724 aaKnown RBP22.86■■□□□ 1.25
GHDC-208ENST00000588352 TOGARAM1Q9Y4F4 1720 aa22.85■■□□□ 1.25
GHDC-208ENST00000588352 EZH2Q15910 746 aaKnown RBP22.85■■□□□ 1.25
GHDC-208ENST00000588352 ZNF530Q6P9A1 599 aaPredicted RBP22.85■■□□□ 1.25
GHDC-208ENST00000588352 PRIM1P49642 420 aaKnown RBP22.84■■□□□ 1.25
GHDC-208ENST00000588352 RSPH6AQ9H0K4 717 aa22.84■■□□□ 1.25
GHDC-208ENST00000588352 KDM6AO15550 1401 aaPredicted RBP22.82■■□□□ 1.24
GHDC-208ENST00000588352 U2AF1L5P0DN76 240 aaPredicted RBP22.82■■□□□ 1.24
GHDC-208ENST00000588352 U2AF1Q01081 240 aaKnown RBP eCLIP22.82■■□□□ 1.24
GHDC-208ENST00000588352 C1orf141Q5JVX7 400 aa22.82■■□□□ 1.24
GHDC-208ENST00000588352 SYTL4Q96C24 671 aaPredicted RBP22.82■■□□□ 1.24
GHDC-208ENST00000588352 DCAF5Q96JK2 942 aa22.82■■□□□ 1.24
GHDC-208ENST00000588352 BTAF1O14981 1849 aa22.82■■□□□ 1.24
GHDC-208ENST00000588352 FCHSD2O94868 740 aa22.8■■□□□ 1.24
GHDC-208ENST00000588352 PRKAR2BP31323 418 aa22.79■■□□□ 1.24
GHDC-208ENST00000588352 AKAP4Q5JQC9 854 aa22.79■■□□□ 1.24
GHDC-208ENST00000588352 NUP188Q5SRE5 1749 aa22.79■■□□□ 1.24
GHDC-208ENST00000588352 MTHFSDQ2M296 383 aaKnown RBP22.78■■□□□ 1.24
GHDC-208ENST00000588352 GAS2L2Q8NHY3 880 aa22.78■■□□□ 1.24
GHDC-208ENST00000588352 MRC1P22897 1456 aa22.78■■□□□ 1.24
GHDC-208ENST00000588352 ERVV-2B6SEH9 535 aa22.76■■□□□ 1.23
GHDC-208ENST00000588352 TXNRD1Q16881 649 aa22.76■■□□□ 1.23
GHDC-208ENST00000588352 ADAMTS7Q9UKP4 1686 aa22.76■■□□□ 1.23
GHDC-208ENST00000588352 PROM2Q8N271 834 aa22.75■■□□□ 1.23
GHDC-208ENST00000588352 TMOD3Q9NYL9 352 aa22.75■■□□□ 1.23
GHDC-208ENST00000588352 MAP3K5Q99683 1374 aa22.75■■□□□ 1.23
GHDC-208ENST00000588352 SLC27A3Q5K4L6 730 aa22.74■■□□□ 1.23
GHDC-208ENST00000588352 MPRIPQ6WCQ1 1025 aa22.74■■□□□ 1.23
GHDC-208ENST00000588352 PALLDQ8WX93 1383 aa22.74■■□□□ 1.23
GHDC-208ENST00000588352 PAPPAQ13219 1627 aa22.73■■□□□ 1.23
GHDC-208ENST00000588352 PIGBQ92521 554 aa22.73■■□□□ 1.23
GHDC-208ENST00000588352 ANP32CO43423 234 aa22.72■■□□□ 1.23
GHDC-208ENST00000588352 SMARCC1Q92922 1105 aaPredicted RBP22.72■■□□□ 1.23
GHDC-208ENST00000588352 PHACTR3Q96KR7 559 aa22.72■■□□□ 1.23
GHDC-208ENST00000588352 LY75O60449 1722 aa22.71■■□□□ 1.23
GHDC-208ENST00000588352 PNNQ9H307 717 aaKnown RBP22.7■■□□□ 1.22
GHDC-208ENST00000588352 CABP4P57796 275 aa22.69■■□□□ 1.22
GHDC-208ENST00000588352 NBPF14Q5TI25 921 aa22.69■■□□□ 1.22
GHDC-208ENST00000588352 PLEKHF1Q96S99 279 aa22.69■■□□□ 1.22
GHDC-208ENST00000588352 ITGB4P16144 1822 aa22.68■■□□□ 1.22
GHDC-208ENST00000588352 GNAT3A8MTJ3 354 aa22.68■■□□□ 1.22
GHDC-208ENST00000588352 RNMTO43148 476 aaKnown RBP22.68■■□□□ 1.22
GHDC-208ENST00000588352 NEFMP07197 916 aa22.68■■□□□ 1.22
GHDC-208ENST00000588352 ANO8Q9HCE9 1232 aaPredicted RBP22.68■■□□□ 1.22
GHDC-208ENST00000588352 CEMIPQ8WUJ3 1361 aa22.67■■□□□ 1.22
GHDC-208ENST00000588352 WDR43Q15061 677 aaKnown RBP eCLIP22.67■■□□□ 1.22
GHDC-208ENST00000588352 LRRC4BQ9NT99 713 aa22.67■■□□□ 1.22
GHDC-208ENST00000588352 SCN11AQ9UI33 1791 aa22.67■■□□□ 1.22
GHDC-208ENST00000588352 SLC52A2Q9HAB3 445 aa22.66■■□□□ 1.22
GHDC-208ENST00000588352 CCNL1Q9UK58 526 aaPredicted RBP22.66■■□□□ 1.22
GHDC-208ENST00000588352 MAPK8IP3Q9UPT6 1336 aa22.65■■□□□ 1.22
GHDC-208ENST00000588352 HMGB2P26583 209 aaKnown RBP22.65■■□□□ 1.22
GHDC-208ENST00000588352 LGR6Q9HBX8 967 aa22.64■■□□□ 1.21
GHDC-208ENST00000588352 ATG3Q9NT62 314 aa22.64■■□□□ 1.21
GHDC-208ENST00000588352 ASAP1Q9ULH1 1129 aa22.64■■□□□ 1.21
GHDC-208ENST00000588352 HTATSF1O43719 755 aaKnown RBP22.63■■□□□ 1.21
GHDC-208ENST00000588352 R3HDM1Q15032 1099 aaKnown RBP22.63■■□□□ 1.21
GHDC-208ENST00000588352 NFATC2IPQ8NCF5 419 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms