RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 PPP2R1AP30153 589 aa23.31■■□□□ 1.32
DNMT1-212ENST00000587197 EIF4A2Q14240 407 aaKnown RBP23.3■■□□□ 1.32
DNMT1-212ENST00000587197 NBPF6Q5VWK0 638 aa23.3■■□□□ 1.32
DNMT1-212ENST00000587197 NBPF4Q96M43 638 aa23.3■■□□□ 1.32
DNMT1-212ENST00000587197 RGPD3A6NKT7 1758 aaPredicted RBP23.29■■□□□ 1.32
DNMT1-212ENST00000587197 RGPD4Q7Z3J3 1758 aa23.29■■□□□ 1.32
DNMT1-212ENST00000587197 DDX54Q8TDD1 881 aaKnown RBP23.29■■□□□ 1.32
DNMT1-212ENST00000587197 RAPGEF4Q8WZA2 1011 aa23.28■■□□□ 1.32
DNMT1-212ENST00000587197 PTF1AQ7RTS3 328 aa23.27■■□□□ 1.32
DNMT1-212ENST00000587197 ZCRB1Q8TBF4 217 aaKnown RBP23.27■■□□□ 1.32
DNMT1-212ENST00000587197 ACSBG1Q96GR2 724 aa23.27■■□□□ 1.32
DNMT1-212ENST00000587197 NUP188Q5SRE5 1749 aa23.27■■□□□ 1.32
DNMT1-212ENST00000587197 NCAPD2Q15021 1401 aa23.26■■□□□ 1.31
DNMT1-212ENST00000587197 IL13P35225 146 aa23.26■■□□□ 1.31
DNMT1-212ENST00000587197 EYA1Q99502 592 aa23.26■■□□□ 1.31
DNMT1-212ENST00000587197 KCNQ2O43526 872 aa23.25■■□□□ 1.31
DNMT1-212ENST00000587197 PRKRIP1Q9H875 184 aaPredicted RBP23.25■■□□□ 1.31
DNMT1-212ENST00000587197 TATP17735 454 aaPredicted RBP23.24■■□□□ 1.31
DNMT1-212ENST00000587197 CFAP53Q96M91 514 aa23.24■■□□□ 1.31
DNMT1-212ENST00000587197 NHSQ6T4R5 1651 aa23.24■■□□□ 1.31
DNMT1-212ENST00000587197 LRP5O75197 1615 aa23.23■■□□□ 1.31
DNMT1-212ENST00000587197 RGPD2P0DJD1 1756 aa23.23■■□□□ 1.31
DNMT1-212ENST00000587197 DIAPH1O60610 1272 aaKnown RBP23.23■■□□□ 1.31
DNMT1-212ENST00000587197 IGSF1Q8N6C5 1336 aa23.23■■□□□ 1.31
DNMT1-212ENST00000587197 TXNRD1Q16881 649 aa23.22■■□□□ 1.31
DNMT1-212ENST00000587197 USHBP1Q8N6Y0 703 aa23.22■■□□□ 1.31
DNMT1-212ENST00000587197 MYBBP1AQ9BQG0 1328 aaKnown RBP23.21■■□□□ 1.31
DNMT1-212ENST00000587197 COL3A1P02461 1466 aaPredicted RBP23.21■■□□□ 1.31
DNMT1-212ENST00000587197 MEGF6O75095 1541 aa23.2■■□□□ 1.3
DNMT1-212ENST00000587197 PLEKHG2Q9H7P9 1386 aa23.2■■□□□ 1.3
DNMT1-212ENST00000587197 PROM2Q8N271 834 aa23.19■■□□□ 1.3
DNMT1-212ENST00000587197 KAT6BQ8WYB5 2073 aa23.19■■□□□ 1.3
DNMT1-212ENST00000587197 SYTL4Q96C24 671 aaPredicted RBP23.17■■□□□ 1.3
DNMT1-212ENST00000587197 STK32BQ9NY57 414 aa23.17■■□□□ 1.3
DNMT1-212ENST00000587197 KDRP35968 1356 aa23.16■■□□□ 1.3
DNMT1-212ENST00000587197 PCDH11XQ9BZA7 1347 aa23.16■■□□□ 1.3
DNMT1-212ENST00000587197 PCDH11YQ9BZA8 1340 aa23.16■■□□□ 1.3
DNMT1-212ENST00000587197 NUDCQ9Y266 331 aa23.15■■□□□ 1.3
DNMT1-212ENST00000587197 ANP32CO43423 234 aa23.14■■□□□ 1.29
DNMT1-212ENST00000587197 PRIM1P49642 420 aaKnown RBP23.14■■□□□ 1.29
DNMT1-212ENST00000587197 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.14■■□□□ 1.29
DNMT1-212ENST00000587197 BTAF1O14981 1849 aa23.14■■□□□ 1.29
DNMT1-212ENST00000587197 ANO8Q9HCE9 1232 aaPredicted RBP23.13■■□□□ 1.29
DNMT1-212ENST00000587197 SLC15A2Q16348 729 aa23.12■■□□□ 1.29
DNMT1-212ENST00000587197 SULT6B1Q6IMI4 303 aa23.12■■□□□ 1.29
DNMT1-212ENST00000587197 SPON1Q9HCB6 807 aa23.12■■□□□ 1.29
DNMT1-212ENST00000587197 SPG7Q9UQ90 795 aa23.12■■□□□ 1.29
DNMT1-212ENST00000587197 SLC27A3Q5K4L6 730 aa23.11■■□□□ 1.29
DNMT1-212ENST00000587197 AEBP1Q8IUX7 1158 aa23.11■■□□□ 1.29
DNMT1-212ENST00000587197 SHANK3Q9BYB0 1731 aa23.11■■□□□ 1.29
DNMT1-212ENST00000587197 DOT1LQ8TEK3 1739 aa23.08■■□□□ 1.29
DNMT1-212ENST00000587197 U2SURPO15042 1029 aaKnown RBP23.08■■□□□ 1.29
DNMT1-212ENST00000587197 HMGB2P26583 209 aaKnown RBP23.07■■□□□ 1.28
DNMT1-212ENST00000587197 HMOX1P09601 288 aa23.06■■□□□ 1.28
DNMT1-212ENST00000587197 AMOTQ4VCS5 1084 aa23.06■■□□□ 1.28
DNMT1-212ENST00000587197 PLEKHO1Q53GL0 409 aaPredicted RBP23.06■■□□□ 1.28
DNMT1-212ENST00000587197 PPP1R1BQ9UD71 204 aaPredicted RBP23.06■■□□□ 1.28
DNMT1-212ENST00000587197 CYP27B1O15528 508 aa23.05■■□□□ 1.28
DNMT1-212ENST00000587197 FCHSD2O94868 740 aa23.04■■□□□ 1.28
DNMT1-212ENST00000587197 U2AF1L5P0DN76 240 aaPredicted RBP23.04■■□□□ 1.28
DNMT1-212ENST00000587197 U2AF1Q01081 240 aaKnown RBP eCLIP23.04■■□□□ 1.28
DNMT1-212ENST00000587197 PKD1L3Q7Z443 1732 aa23.03■■□□□ 1.28
DNMT1-212ENST00000587197 RSPH6AQ9H0K4 717 aa23.03■■□□□ 1.28
DNMT1-212ENST00000587197 LRRC4BQ9NT99 713 aa23.03■■□□□ 1.28
DNMT1-212ENST00000587197 SRCAPQ6ZRS2 3230 aa23.03■■□□□ 1.28
DNMT1-212ENST00000587197 IFNL2Q8IZJ0 200 aa23.02■■□□□ 1.28
DNMT1-212ENST00000587197 NKX1-1Q15270 411 aaPredicted RBP23.01■■□□□ 1.27
DNMT1-212ENST00000587197 MPRIPQ6WCQ1 1025 aa23.01■■□□□ 1.27
DNMT1-212ENST00000587197 CASZ1Q86V15 1759 aa23■■□□□ 1.27
DNMT1-212ENST00000587197 CCNL1Q9UK58 526 aaPredicted RBP23■■□□□ 1.27
DNMT1-212ENST00000587197 ZBTB7AO95365 584 aa22.99■■□□□ 1.27
DNMT1-212ENST00000587197 SMARCC1Q92922 1105 aaPredicted RBP22.99■■□□□ 1.27
DNMT1-212ENST00000587197 PAPPAQ13219 1627 aa22.99■■□□□ 1.27
DNMT1-212ENST00000587197 PHKG2P15735 406 aa22.98■■□□□ 1.27
DNMT1-212ENST00000587197 PDGFDQ9GZP0 370 aaPredicted RBP22.98■■□□□ 1.27
DNMT1-212ENST00000587197 MTFR1LQ9H019 292 aa22.98■■□□□ 1.27
DNMT1-212ENST00000587197 PNNQ9H307 717 aaKnown RBP22.98■■□□□ 1.27
DNMT1-212ENST00000587197 LY75O60449 1722 aa22.97■■□□□ 1.27
DNMT1-212ENST00000587197 PRKAR2BP31323 418 aa22.97■■□□□ 1.27
DNMT1-212ENST00000587197 ZNF530Q6P9A1 599 aaPredicted RBP22.97■■□□□ 1.27
DNMT1-212ENST00000587197 AKT1S1Q96B36 256 aa22.97■■□□□ 1.27
DNMT1-212ENST00000587197 HSP90AB1P08238 724 aaKnown RBP22.96■■□□□ 1.27
DNMT1-212ENST00000587197 ZNF827Q17R98 1081 aa22.96■■□□□ 1.27
DNMT1-212ENST00000587197 TFCP2L1Q9NZI6 479 aa22.96■■□□□ 1.27
DNMT1-212ENST00000587197 ATF5Q9Y2D1 282 aaPredicted RBP22.95■■□□□ 1.26
DNMT1-212ENST00000587197 PALLDQ8WX93 1383 aa22.94■■□□□ 1.26
DNMT1-212ENST00000587197 KCNQ4P56696 695 aa22.94■■□□□ 1.26
DNMT1-212ENST00000587197 WDR43Q15061 677 aaKnown RBP eCLIP22.94■■□□□ 1.26
DNMT1-212ENST00000587197 MTHFSDQ2M296 383 aaKnown RBP22.94■■□□□ 1.26
DNMT1-212ENST00000587197 DIEXFQ68CQ4 756 aaKnown RBP22.94■■□□□ 1.26
DNMT1-212ENST00000587197 GAS2L2Q8NHY3 880 aa22.94■■□□□ 1.26
DNMT1-212ENST00000587197 SLC16A10Q8TF71 515 aa22.94■■□□□ 1.26
DNMT1-212ENST00000587197 TMOD3Q9NYL9 352 aa22.94■■□□□ 1.26
DNMT1-212ENST00000587197 AKAP4Q5JQC9 854 aa22.93■■□□□ 1.26
DNMT1-212ENST00000587197 C1orf141Q5JVX7 400 aa22.93■■□□□ 1.26
DNMT1-212ENST00000587197 CCDC184Q52MB2 194 aa22.92■■□□□ 1.26
DNMT1-212ENST00000587197 PIGBQ92521 554 aa22.92■■□□□ 1.26
DNMT1-212ENST00000587197 DCAF5Q96JK2 942 aa22.92■■□□□ 1.26
DNMT1-212ENST00000587197 PHACTR3Q96KR7 559 aa22.92■■□□□ 1.26
DNMT1-212ENST00000587197 PLEKHF1Q96S99 279 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms