RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 IL13P35225 146 aa22.82■■□□□ 1.24
VAT1-204ENST00000587147 DDX10Q13206 875 aaKnown RBP22.82■■□□□ 1.24
VAT1-204ENST00000587147 RGPD3A6NKT7 1758 aaPredicted RBP22.81■■□□□ 1.24
VAT1-204ENST00000587147 RGPD4Q7Z3J3 1758 aa22.81■■□□□ 1.24
VAT1-204ENST00000587147 COL3A1P02461 1466 aaPredicted RBP22.81■■□□□ 1.24
VAT1-204ENST00000587147 BAG6P46379 1132 aa22.81■■□□□ 1.24
VAT1-204ENST00000587147 PCDH11XQ9BZA7 1347 aa22.81■■□□□ 1.24
VAT1-204ENST00000587147 PCDH11YQ9BZA8 1340 aa22.81■■□□□ 1.24
VAT1-204ENST00000587147 NHSQ6T4R5 1651 aa22.8■■□□□ 1.24
VAT1-204ENST00000587147 ZNF316A6NFI3 1004 aaPredicted RBP22.79■■□□□ 1.24
VAT1-204ENST00000587147 DIAPH1O60610 1272 aaKnown RBP22.79■■□□□ 1.24
VAT1-204ENST00000587147 PPP2R1AP30153 589 aa22.79■■□□□ 1.24
VAT1-204ENST00000587147 RALBP1Q15311 655 aa22.79■■□□□ 1.24
VAT1-204ENST00000587147 CFAP53Q96M91 514 aa22.79■■□□□ 1.24
VAT1-204ENST00000587147 BCL11BQ9C0K0 894 aaPredicted RBP22.79■■□□□ 1.24
VAT1-204ENST00000587147 TRIM37O94972 964 aa22.78■■□□□ 1.24
VAT1-204ENST00000587147 SPG7Q9UQ90 795 aa22.78■■□□□ 1.24
VAT1-204ENST00000587147 DDX54Q8TDD1 881 aaKnown RBP22.75■■□□□ 1.23
VAT1-204ENST00000587147 AMOTQ4VCS5 1084 aa22.74■■□□□ 1.23
VAT1-204ENST00000587147 PLSCR1O15162 318 aa22.72■■□□□ 1.23
VAT1-204ENST00000587147 APBA3O96018 575 aa22.72■■□□□ 1.23
VAT1-204ENST00000587147 CNGB1Q14028 1251 aaPredicted RBP22.72■■□□□ 1.23
VAT1-204ENST00000587147 NKX1-1Q15270 411 aaPredicted RBP22.72■■□□□ 1.23
VAT1-204ENST00000587147 DOT1LQ8TEK3 1739 aa22.71■■□□□ 1.23
VAT1-204ENST00000587147 PLEKHO1Q53GL0 409 aaPredicted RBP22.71■■□□□ 1.23
VAT1-204ENST00000587147 SULT6B1Q6IMI4 303 aa22.71■■□□□ 1.23
VAT1-204ENST00000587147 DEFB132Q7Z7B7 95 aa22.71■■□□□ 1.23
VAT1-204ENST00000587147 NUDCQ9Y266 331 aa22.71■■□□□ 1.23
VAT1-204ENST00000587147 CYP27B1O15528 508 aa22.7■■□□□ 1.22
VAT1-204ENST00000587147 RREB1Q92766 1687 aa22.7■■□□□ 1.22
VAT1-204ENST00000587147 IFNL2Q8IZJ0 200 aa22.69■■□□□ 1.22
VAT1-204ENST00000587147 CAMKK2Q96RR4 588 aa22.69■■□□□ 1.22
VAT1-204ENST00000587147 AEBP1Q8IUX7 1158 aa22.68■■□□□ 1.22
VAT1-204ENST00000587147 BTAF1O14981 1849 aa22.67■■□□□ 1.22
VAT1-204ENST00000587147 HSP90AB1P08238 724 aaKnown RBP22.67■■□□□ 1.22
VAT1-204ENST00000587147 EN1Q05925 392 aaPredicted RBP22.67■■□□□ 1.22
VAT1-204ENST00000587147 MYBBP1AQ9BQG0 1328 aaKnown RBP22.66■■□□□ 1.22
VAT1-204ENST00000587147 PHKG2P15735 406 aa22.66■■□□□ 1.22
VAT1-204ENST00000587147 KAT6BQ8WYB5 2073 aa22.64■■□□□ 1.22
VAT1-204ENST00000587147 KCNQ2O43526 872 aa22.64■■□□□ 1.21
VAT1-204ENST00000587147 ACSBG1Q96GR2 724 aa22.64■■□□□ 1.21
VAT1-204ENST00000587147 TOGARAM1Q9Y4F4 1720 aa22.63■■□□□ 1.21
VAT1-204ENST00000587147 U2SURPO15042 1029 aaKnown RBP22.63■■□□□ 1.21
VAT1-204ENST00000587147 PRKRIP1Q9H875 184 aaPredicted RBP22.63■■□□□ 1.21
VAT1-204ENST00000587147 EZH2Q15910 746 aaKnown RBP22.62■■□□□ 1.21
VAT1-204ENST00000587147 NUP188Q5SRE5 1749 aa22.62■■□□□ 1.21
VAT1-204ENST00000587147 HMOX1P09601 288 aa22.61■■□□□ 1.21
VAT1-204ENST00000587147 PRIM1P49642 420 aaKnown RBP22.61■■□□□ 1.21
VAT1-204ENST00000587147 C1orf141Q5JVX7 400 aa22.61■■□□□ 1.21
VAT1-204ENST00000587147 ZNF530Q6P9A1 599 aaPredicted RBP22.61■■□□□ 1.21
VAT1-204ENST00000587147 PTF1AQ7RTS3 328 aa22.61■■□□□ 1.21
VAT1-204ENST00000587147 DCAF5Q96JK2 942 aa22.61■■□□□ 1.21
VAT1-204ENST00000587147 ITGB4P16144 1822 aa22.61■■□□□ 1.21
VAT1-204ENST00000587147 FCHSD2O94868 740 aa22.6■■□□□ 1.21
VAT1-204ENST00000587147 HMGB2P26583 209 aaKnown RBP22.6■■□□□ 1.21
VAT1-204ENST00000587147 ERVV-2B6SEH9 535 aa22.59■■□□□ 1.21
VAT1-204ENST00000587147 LY75O60449 1722 aa22.58■■□□□ 1.21
VAT1-204ENST00000587147 AKAP4Q5JQC9 854 aa22.58■■□□□ 1.21
VAT1-204ENST00000587147 SYTL4Q96C24 671 aaPredicted RBP22.58■■□□□ 1.21
VAT1-204ENST00000587147 U2AF1L5P0DN76 240 aaPredicted RBP22.57■■□□□ 1.2
VAT1-204ENST00000587147 U2AF1Q01081 240 aaKnown RBP eCLIP22.57■■□□□ 1.2
VAT1-204ENST00000587147 RSPH6AQ9H0K4 717 aa22.57■■□□□ 1.2
VAT1-204ENST00000587147 ADAMTS7Q9UKP4 1686 aa22.57■■□□□ 1.2
VAT1-204ENST00000587147 SLC27A3Q5K4L6 730 aa22.56■■□□□ 1.2
VAT1-204ENST00000587147 GAS2L2Q8NHY3 880 aa22.56■■□□□ 1.2
VAT1-204ENST00000587147 SCN11AQ9UI33 1791 aa22.55■■□□□ 1.2
VAT1-204ENST00000587147 TXNRD1Q16881 649 aa22.55■■□□□ 1.2
VAT1-204ENST00000587147 PNNQ9H307 717 aaKnown RBP22.55■■□□□ 1.2
VAT1-204ENST00000587147 KDM6AO15550 1401 aaPredicted RBP22.55■■□□□ 1.2
VAT1-204ENST00000587147 NBPF14Q5TI25 921 aa22.54■■□□□ 1.2
VAT1-204ENST00000587147 SMARCC1Q92922 1105 aaPredicted RBP22.54■■□□□ 1.2
VAT1-204ENST00000587147 PRKAR2BP31323 418 aa22.53■■□□□ 1.2
VAT1-204ENST00000587147 PROM2Q8N271 834 aa22.53■■□□□ 1.2
VAT1-204ENST00000587147 TMOD3Q9NYL9 352 aa22.53■■□□□ 1.2
VAT1-204ENST00000587147 MTHFSDQ2M296 383 aaKnown RBP22.52■■□□□ 1.2
VAT1-204ENST00000587147 MPRIPQ6WCQ1 1025 aa22.52■■□□□ 1.2
VAT1-204ENST00000587147 MRC1P22897 1456 aa22.52■■□□□ 1.2
VAT1-204ENST00000587147 PAPPAQ13219 1627 aa22.51■■□□□ 1.19
VAT1-204ENST00000587147 PIGBQ92521 554 aa22.51■■□□□ 1.19
VAT1-204ENST00000587147 NEFMP07197 916 aa22.5■■□□□ 1.19
VAT1-204ENST00000587147 VIRMAQ69YN4 1812 aaKnown RBP22.5■■□□□ 1.19
VAT1-204ENST00000587147 MAP3K5Q99683 1374 aa22.5■■□□□ 1.19
VAT1-204ENST00000587147 ZNF831Q5JPB2 1677 aa22.49■■□□□ 1.19
VAT1-204ENST00000587147 PALLDQ8WX93 1383 aa22.49■■□□□ 1.19
VAT1-204ENST00000587147 GNAT3A8MTJ3 354 aa22.47■■□□□ 1.19
VAT1-204ENST00000587147 ANP32CO43423 234 aa22.47■■□□□ 1.19
VAT1-204ENST00000587147 CABP4P57796 275 aa22.46■■□□□ 1.19
VAT1-204ENST00000587147 PHACTR3Q96KR7 559 aa22.46■■□□□ 1.19
VAT1-204ENST00000587147 RNMTO43148 476 aaKnown RBP22.45■■□□□ 1.18
VAT1-204ENST00000587147 HTATSF1O43719 755 aaKnown RBP22.45■■□□□ 1.18
VAT1-204ENST00000587147 SLC52A2Q9HAB3 445 aa22.45■■□□□ 1.18
VAT1-204ENST00000587147 QSER1Q2KHR3 1735 aa22.44■■□□□ 1.18
VAT1-204ENST00000587147 PLEKHF1Q96S99 279 aa22.44■■□□□ 1.18
VAT1-204ENST00000587147 CCNL1Q9UK58 526 aaPredicted RBP22.44■■□□□ 1.18
VAT1-204ENST00000587147 CEMIPQ8WUJ3 1361 aa22.43■■□□□ 1.18
VAT1-204ENST00000587147 WDR43Q15061 677 aaKnown RBP eCLIP22.43■■□□□ 1.18
VAT1-204ENST00000587147 LRRC4BQ9NT99 713 aa22.43■■□□□ 1.18
VAT1-204ENST00000587147 STK32BQ9NY57 414 aa22.43■■□□□ 1.18
VAT1-204ENST00000587147 C5P01031 1676 aa22.42■■□□□ 1.18
VAT1-204ENST00000587147 CICQ96RK0 1608 aaPredicted RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms