RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 QRICH2Q9H0J4 1663 aa18.66■□□□□ 0.58
SMARCA4-211ENST00000586921 DCAF11Q8TEB1 546 aa18.65■□□□□ 0.58
SMARCA4-211ENST00000586921 NFAT5O94916 1531 aa18.64■□□□□ 0.58
SMARCA4-211ENST00000586921 PRIM1P49642 420 aaKnown RBP18.64■□□□□ 0.57
SMARCA4-211ENST00000586921 DDX54Q8TDD1 881 aaKnown RBP18.64■□□□□ 0.57
SMARCA4-211ENST00000586921 CABP2Q9NPB3 220 aa18.64■□□□□ 0.57
SMARCA4-211ENST00000586921 ERBB3P21860 1342 aa18.64■□□□□ 0.57
SMARCA4-211ENST00000586921 CABP1Q9NZU7 370 aa18.63■□□□□ 0.57
SMARCA4-211ENST00000586921 ANKRD36BQ8N2N9 1353 aa18.63■□□□□ 0.57
SMARCA4-211ENST00000586921 FLAD1Q8NFF5 587 aa18.62■□□□□ 0.57
SMARCA4-211ENST00000586921 DOT1LQ8TEK3 1739 aa18.61■□□□□ 0.57
SMARCA4-211ENST00000586921 NSD2O96028 1365 aa18.61■□□□□ 0.57
SMARCA4-211ENST00000586921 C5P01031 1676 aa18.59■□□□□ 0.57
SMARCA4-211ENST00000586921 USP47Q96K76 1375 aa18.58■□□□□ 0.57
SMARCA4-211ENST00000586921 STAC3Q96MF2 364 aa18.58■□□□□ 0.56
SMARCA4-211ENST00000586921 PLEKHG2Q9H7P9 1386 aa18.57■□□□□ 0.56
SMARCA4-211ENST00000586921 SMC1BQ8NDV3 1235 aa18.57■□□□□ 0.56
SMARCA4-211ENST00000586921 USP54Q70EL1 1684 aa18.57■□□□□ 0.56
SMARCA4-211ENST00000586921 TTC21BQ7Z4L5 1316 aa18.56■□□□□ 0.56
SMARCA4-211ENST00000586921 FAM161AQ3B820 660 aa18.56■□□□□ 0.56
SMARCA4-211ENST00000586921 ARHGAP27Q6ZUM4 889 aa18.56■□□□□ 0.56
SMARCA4-211ENST00000586921 KDM2BQ8NHM5 1336 aa18.55■□□□□ 0.56
SMARCA4-211ENST00000586921 ANKRD24Q8TF21 1146 aa18.55■□□□□ 0.56
SMARCA4-211ENST00000586921 BCS1LQ9Y276 419 aa18.55■□□□□ 0.56
SMARCA4-211ENST00000586921 HMGB2P26583 209 aaKnown RBP18.54■□□□□ 0.56
SMARCA4-211ENST00000586921 C10orf71Q711Q0 1435 aa18.54■□□□□ 0.56
SMARCA4-211ENST00000586921 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
SMARCA4-211ENST00000586921 TTC21AQ8NDW8 1320 aa18.53■□□□□ 0.56
SMARCA4-211ENST00000586921 PXDNLA1KZ92 1463 aa18.53■□□□□ 0.56
SMARCA4-211ENST00000586921 C9orf131Q5VYM1 1079 aa18.52■□□□□ 0.56
SMARCA4-211ENST00000586921 RRAGCQ9HB90 399 aa18.51■□□□□ 0.55
SMARCA4-211ENST00000586921 TNRC6CQ9HCJ0 1690 aaKnown RBP18.5■□□□□ 0.55
SMARCA4-211ENST00000586921 CENPJQ9HC77 1338 aaPredicted RBP18.5■□□□□ 0.55
SMARCA4-211ENST00000586921 LTN1O94822 1766 aa18.5■□□□□ 0.55
SMARCA4-211ENST00000586921 PKD1L3Q7Z443 1732 aa18.5■□□□□ 0.55
SMARCA4-211ENST00000586921 PHF14O94880 888 aa18.5■□□□□ 0.55
SMARCA4-211ENST00000586921 AK7Q96M32 723 aa18.5■□□□□ 0.55
SMARCA4-211ENST00000586921 ZNF692Q9BU19 519 aaPredicted RBP18.5■□□□□ 0.55
SMARCA4-211ENST00000586921 TAF1LQ8IZX4 1826 aa18.5■□□□□ 0.55
SMARCA4-211ENST00000586921 N4BP2Q86UW6 1770 aaPredicted RBP18.49■□□□□ 0.55
SMARCA4-211ENST00000586921 AMIGO3Q86WK7 504 aa18.48■□□□□ 0.55
SMARCA4-211ENST00000586921 C4BP0C0L5 1744 aa18.48■□□□□ 0.55
SMARCA4-211ENST00000586921 TOGARAM1Q9Y4F4 1720 aa18.48■□□□□ 0.55
SMARCA4-211ENST00000586921 NSD3Q9BZ95 1437 aa18.48■□□□□ 0.55
SMARCA4-211ENST00000586921 KIAA1551Q9HCM1 1747 aa18.47■□□□□ 0.55
SMARCA4-211ENST00000586921 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.47■□□□□ 0.55
SMARCA4-211ENST00000586921 KIF13BQ9NQT8 1826 aa18.46■□□□□ 0.55
SMARCA4-211ENST00000586921 A0A0G2JLW4 131 aa18.46■□□□□ 0.55
SMARCA4-211ENST00000586921 FCHSD2O94868 740 aa18.46■□□□□ 0.55
SMARCA4-211ENST00000586921 TGFB2P61812 414 aa18.46■□□□□ 0.55
SMARCA4-211ENST00000586921 UBR3Q6ZT12 1888 aa18.46■□□□□ 0.54
SMARCA4-211ENST00000586921 PALLDQ8WX93 1383 aa18.45■□□□□ 0.54
SMARCA4-211ENST00000586921 SMIM5Q71RC9 77 aa18.45■□□□□ 0.54
SMARCA4-211ENST00000586921 PRDM10Q9NQV6 1147 aa18.45■□□□□ 0.54
SMARCA4-211ENST00000586921 KIAA1210Q9ULL0 1709 aa18.44■□□□□ 0.54
SMARCA4-211ENST00000586921 ZCRB1Q8TBF4 217 aaKnown RBP18.44■□□□□ 0.54
SMARCA4-211ENST00000586921 RNF181Q9P0P0 153 aa18.44■□□□□ 0.54
SMARCA4-211ENST00000586921 FAM208AQ9UK61 1670 aaKnown RBP18.44■□□□□ 0.54
SMARCA4-211ENST00000586921 FOXN1O15353 648 aa18.43■□□□□ 0.54
SMARCA4-211ENST00000586921 MMP10P09238 476 aa18.43■□□□□ 0.54
SMARCA4-211ENST00000586921 KTN1Q86UP2 1357 aaKnown RBP18.42■□□□□ 0.54
SMARCA4-211ENST00000586921 SSFA2P28290 1259 aa18.41■□□□□ 0.54
SMARCA4-211ENST00000586921 DPEP1P16444 411 aa18.4■□□□□ 0.54
SMARCA4-211ENST00000586921 MLLT1Q03111 559 aaPredicted RBP18.4■□□□□ 0.54
SMARCA4-211ENST00000586921 NBPF1Q3BBV0 1214 aa18.4■□□□□ 0.54
SMARCA4-211ENST00000586921 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.4■□□□□ 0.54
SMARCA4-211ENST00000586921 LTV1Q96GA3 475 aaPredicted RBP18.4■□□□□ 0.54
SMARCA4-211ENST00000586921 EVC2Q86UK5 1308 aa18.4■□□□□ 0.54
SMARCA4-211ENST00000586921 USP31Q70CQ4 1352 aa18.4■□□□□ 0.54
SMARCA4-211ENST00000586921 BRCA1P38398 1863 aaKnown RBP18.39■□□□□ 0.54
SMARCA4-211ENST00000586921 ARFGEF1Q9Y6D6 1849 aa18.39■□□□□ 0.53
SMARCA4-211ENST00000586921 ABHD8Q96I13 439 aa18.38■□□□□ 0.53
SMARCA4-211ENST00000586921 MEGF6O75095 1541 aa18.38■□□□□ 0.53
SMARCA4-211ENST00000586921 CTCFP49711 727 aaPredicted RBP18.37■□□□□ 0.53
SMARCA4-211ENST00000586921 AIDAQ96BJ3 306 aa18.37■□□□□ 0.53
SMARCA4-211ENST00000586921 MKRN1Q9UHC7 482 aaKnown RBP18.37■□□□□ 0.53
SMARCA4-211ENST00000586921 VEGFAP15692 232 aaPredicted RBP18.36■□□□□ 0.53
SMARCA4-211ENST00000586921 NME9Q86XW9 330 aa18.36■□□□□ 0.53
SMARCA4-211ENST00000586921 MON2Q7Z3U7 1717 aa18.35■□□□□ 0.53
SMARCA4-211ENST00000586921 MPRIPQ6WCQ1 1025 aa18.35■□□□□ 0.53
SMARCA4-211ENST00000586921 IP6K1Q92551 441 aa18.34■□□□□ 0.53
SMARCA4-211ENST00000586921 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
SMARCA4-211ENST00000586921 DCAF5Q96JK2 942 aa18.34■□□□□ 0.53
SMARCA4-211ENST00000586921 CREBZFQ9NS37 354 aa18.34■□□□□ 0.53
SMARCA4-211ENST00000586921 CCDC87Q9NVE4 849 aa18.34■□□□□ 0.53
SMARCA4-211ENST00000586921 GNPATO15228 680 aa18.33■□□□□ 0.52
SMARCA4-211ENST00000586921 ZC3H4Q9UPT8 1303 aaKnown RBP18.32■□□□□ 0.52
SMARCA4-211ENST00000586921 PIM2Q9P1W9 311 aa18.32■□□□□ 0.52
SMARCA4-211ENST00000586921 SBF1O95248 1867 aa18.32■□□□□ 0.52
SMARCA4-211ENST00000586921 DALRD3Q5D0E6 543 aaKnown RBP18.31■□□□□ 0.52
SMARCA4-211ENST00000586921 LINC00116Q8NCU8 138 aa18.31■□□□□ 0.52
SMARCA4-211ENST00000586921 KCNA3P22001 575 aa18.3■□□□□ 0.52
SMARCA4-211ENST00000586921 LBX1P52954 281 aa18.3■□□□□ 0.52
SMARCA4-211ENST00000586921 CGNL1Q0VF96 1302 aa18.29■□□□□ 0.52
SMARCA4-211ENST00000586921 NLGN1Q8N2Q7 840 aa18.29■□□□□ 0.52
SMARCA4-211ENST00000586921 RGPD2P0DJD1 1756 aa18.29■□□□□ 0.52
SMARCA4-211ENST00000586921 C4AP0C0L4 1744 aa18.29■□□□□ 0.52
SMARCA4-211ENST00000586921 GLTPD2A6NH11 291 aa18.28■□□□□ 0.52
SMARCA4-211ENST00000586921 CCDC85CA6NKD9 419 aa18.28■□□□□ 0.52
SMARCA4-211ENST00000586921 RGS19P49795 217 aa18.28■□□□□ 0.52
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