RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 PNNQ9H307 717 aaKnown RBP23.53■■□□□ 1.36
RBFOX1-222ENST00000585867 A0A0G2JS52 829 aa23.52■■□□□ 1.36
RBFOX1-222ENST00000585867 ONECUT3O60422 494 aaPredicted RBP23.52■■□□□ 1.36
RBFOX1-222ENST00000585867 MYT1Q01538 1121 aa23.52■■□□□ 1.36
RBFOX1-222ENST00000585867 DISP2A7MBM2 1401 aa23.52■■□□□ 1.36
RBFOX1-222ENST00000585867 MEGF6O75095 1541 aa23.51■■□□□ 1.35
RBFOX1-222ENST00000585867 PRKAR2BP31323 418 aa23.51■■□□□ 1.35
RBFOX1-222ENST00000585867 RUNDC1Q96C34 613 aa23.51■■□□□ 1.35
RBFOX1-222ENST00000585867 WNK3Q9BYP7 1800 aa23.5■■□□□ 1.35
RBFOX1-222ENST00000585867 PDE3BQ13370 1112 aa23.49■■□□□ 1.35
RBFOX1-222ENST00000585867 SEPT12Q8IYM1 358 aa23.48■■□□□ 1.35
RBFOX1-222ENST00000585867 EXOC5O00471 708 aa23.48■■□□□ 1.35
RBFOX1-222ENST00000585867 CCDC146Q8IYE0 955 aa23.48■■□□□ 1.35
RBFOX1-222ENST00000585867 PARP4Q9UKK3 1724 aaKnown RBP23.47■■□□□ 1.35
RBFOX1-222ENST00000585867 DDB1Q16531 1140 aa23.47■■□□□ 1.35
RBFOX1-222ENST00000585867 OVOS2A0A0G2JMS6 1433 aa23.47■■□□□ 1.35
RBFOX1-222ENST00000585867 THSD7AQ9UPZ6 1657 aa23.47■■□□□ 1.35
RBFOX1-222ENST00000585867 PLEKHO1Q53GL0 409 aaPredicted RBP23.46■■□□□ 1.35
RBFOX1-222ENST00000585867 ZCRB1Q8TBF4 217 aaKnown RBP23.46■■□□□ 1.35
RBFOX1-222ENST00000585867 PLEKHF1Q96S99 279 aa23.46■■□□□ 1.35
RBFOX1-222ENST00000585867 NEFMP07197 916 aa23.45■■□□□ 1.34
RBFOX1-222ENST00000585867 PHACTR3Q96KR7 559 aa23.45■■□□□ 1.34
RBFOX1-222ENST00000585867 SPG7Q9UQ90 795 aa23.45■■□□□ 1.34
RBFOX1-222ENST00000585867 NCBP3Q53F19 620 aaKnown RBP23.44■■□□□ 1.34
RBFOX1-222ENST00000585867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.44■■□□□ 1.34
RBFOX1-222ENST00000585867 AMOTQ4VCS5 1084 aa23.44■■□□□ 1.34
RBFOX1-222ENST00000585867 PLEKHG2Q9H7P9 1386 aa23.43■■□□□ 1.34
RBFOX1-222ENST00000585867 APAF1O14727 1248 aa23.43■■□□□ 1.34
RBFOX1-222ENST00000585867 MAPK8IP3Q9UPT6 1336 aa23.42■■□□□ 1.34
RBFOX1-222ENST00000585867 MTHFSDQ2M296 383 aaKnown RBP23.42■■□□□ 1.34
RBFOX1-222ENST00000585867 LRRC37A3O60309 1634 aa23.42■■□□□ 1.34
RBFOX1-222ENST00000585867 DDX54Q8TDD1 881 aaKnown RBP23.41■■□□□ 1.34
RBFOX1-222ENST00000585867 RGS12O14924 1447 aa23.41■■□□□ 1.34
RBFOX1-222ENST00000585867 SALL2Q9Y467 1007 aaPredicted RBP23.4■■□□□ 1.34
RBFOX1-222ENST00000585867 TNS2Q63HR2 1409 aa23.4■■□□□ 1.34
RBFOX1-222ENST00000585867 PKD1L3Q7Z443 1732 aa23.4■■□□□ 1.34
RBFOX1-222ENST00000585867 ZNF530Q6P9A1 599 aaPredicted RBP23.39■■□□□ 1.33
RBFOX1-222ENST00000585867 PCDH11XQ9BZA7 1347 aa23.38■■□□□ 1.33
RBFOX1-222ENST00000585867 PCDH11YQ9BZA8 1340 aa23.38■■□□□ 1.33
RBFOX1-222ENST00000585867 GAS2L2Q8NHY3 880 aa23.38■■□□□ 1.33
RBFOX1-222ENST00000585867 SENP3-EIF4A1A0A087X0R7 540 aa23.37■■□□□ 1.33
RBFOX1-222ENST00000585867 CYP27B1O15528 508 aa23.37■■□□□ 1.33
RBFOX1-222ENST00000585867 KRT27Q7Z3Y8 459 aa23.37■■□□□ 1.33
RBFOX1-222ENST00000585867 IFNL2Q8IZJ0 200 aa23.37■■□□□ 1.33
RBFOX1-222ENST00000585867 BRWD3Q6RI45 1802 aa23.37■■□□□ 1.33
RBFOX1-222ENST00000585867 SHANK3Q9BYB0 1731 aa23.37■■□□□ 1.33
RBFOX1-222ENST00000585867 MARCH10Q8NA82 808 aaPredicted RBP23.36■■□□□ 1.33
RBFOX1-222ENST00000585867 ZNF521Q96K83 1311 aa23.36■■□□□ 1.33
RBFOX1-222ENST00000585867 PHKG2P15735 406 aa23.35■■□□□ 1.33
RBFOX1-222ENST00000585867 CCDC27Q2M243 656 aa23.35■■□□□ 1.33
RBFOX1-222ENST00000585867 C1orf141Q5JVX7 400 aa23.35■■□□□ 1.33
RBFOX1-222ENST00000585867 NFE2L2Q16236 605 aa23.34■■□□□ 1.33
RBFOX1-222ENST00000585867 AKAP4Q5JQC9 854 aa23.34■■□□□ 1.33
RBFOX1-222ENST00000585867 TMPOP42166 694 aaKnown RBP23.33■■□□□ 1.33
RBFOX1-222ENST00000585867 GOLGA2Q08379 1002 aa23.33■■□□□ 1.33
RBFOX1-222ENST00000585867 FAM182BQ5T319 152 aa23.33■■□□□ 1.33
RBFOX1-222ENST00000585867 NEUROD2Q15784 382 aa23.32■■□□□ 1.32
RBFOX1-222ENST00000585867 RRP7AQ9Y3A4 280 aaKnown RBP23.32■■□□□ 1.32
RBFOX1-222ENST00000585867 GNAT3A8MTJ3 354 aa23.31■■□□□ 1.32
RBFOX1-222ENST00000585867 RIPK4P57078 832 aa23.31■■□□□ 1.32
RBFOX1-222ENST00000585867 HSP90AB1P08238 724 aaKnown RBP23.3■■□□□ 1.32
RBFOX1-222ENST00000585867 NKX1-1Q15270 411 aaPredicted RBP23.3■■□□□ 1.32
RBFOX1-222ENST00000585867 MAP3K5Q99683 1374 aa23.29■■□□□ 1.32
RBFOX1-222ENST00000585867 MPRIPQ6WCQ1 1025 aa23.29■■□□□ 1.32
RBFOX1-222ENST00000585867 WDR63Q8IWG1 891 aa23.28■■□□□ 1.32
RBFOX1-222ENST00000585867 WWC1Q8IX03 1113 aa23.28■■□□□ 1.32
RBFOX1-222ENST00000585867 RTF1Q92541 710 aaKnown RBP23.27■■□□□ 1.32
RBFOX1-222ENST00000585867 DCAF5Q96JK2 942 aa23.27■■□□□ 1.32
RBFOX1-222ENST00000585867 DLG5Q8TDM6 1919 aa23.27■■□□□ 1.32
RBFOX1-222ENST00000585867 E9PSI1 815 aa23.27■■□□□ 1.32
RBFOX1-222ENST00000585867 LGR6Q9HBX8 967 aa23.27■■□□□ 1.32
RBFOX1-222ENST00000585867 HTATSF1O43719 755 aaKnown RBP23.26■■□□□ 1.31
RBFOX1-222ENST00000585867 FAM196AQ6ZSG2 479 aa23.26■■□□□ 1.31
RBFOX1-222ENST00000585867 RNMTO43148 476 aaKnown RBP23.25■■□□□ 1.31
RBFOX1-222ENST00000585867 SLFN5Q08AF3 891 aa23.24■■□□□ 1.31
RBFOX1-222ENST00000585867 LMOD3Q0VAK6 560 aa23.24■■□□□ 1.31
RBFOX1-222ENST00000585867 DCTN1Q14203 1278 aa23.24■■□□□ 1.31
RBFOX1-222ENST00000585867 IL17REQ8NFR9 667 aa23.24■■□□□ 1.31
RBFOX1-222ENST00000585867 CDCA7LQ96GN5 454 aa23.24■■□□□ 1.31
RBFOX1-222ENST00000585867 KDM6AO15550 1401 aaPredicted RBP23.24■■□□□ 1.31
RBFOX1-222ENST00000585867 MCM10Q7L590 875 aa23.23■■□□□ 1.31
RBFOX1-222ENST00000585867 ACSBG1Q96GR2 724 aa23.23■■□□□ 1.31
RBFOX1-222ENST00000585867 TRIM35Q9UPQ4 493 aa23.23■■□□□ 1.31
RBFOX1-222ENST00000585867 GTF3C3Q9Y5Q9 886 aa23.23■■□□□ 1.31
RBFOX1-222ENST00000585867 BCL9O00512 1426 aa23.22■■□□□ 1.31
RBFOX1-222ENST00000585867 ERVV-2B6SEH9 535 aa23.21■■□□□ 1.31
RBFOX1-222ENST00000585867 NEFLP07196 543 aa23.21■■□□□ 1.31
RBFOX1-222ENST00000585867 PRIM1P49642 420 aaKnown RBP23.21■■□□□ 1.31
RBFOX1-222ENST00000585867 SCN11AQ9UI33 1791 aa23.21■■□□□ 1.31
RBFOX1-222ENST00000585867 TRMT2AQ8IZ69 625 aaKnown RBP23.2■■□□□ 1.3
RBFOX1-222ENST00000585867 SYTL4Q96C24 671 aaPredicted RBP23.2■■□□□ 1.3
RBFOX1-222ENST00000585867 THUMPD2Q9BTF0 503 aaKnown RBP23.2■■□□□ 1.3
RBFOX1-222ENST00000585867 VIRMAQ69YN4 1812 aaKnown RBP23.2■■□□□ 1.3
RBFOX1-222ENST00000585867 IL16Q14005 1332 aa23.2■■□□□ 1.3
RBFOX1-222ENST00000585867 CABP4P57796 275 aa23.19■■□□□ 1.3
RBFOX1-222ENST00000585867 CALD1Q05682 793 aaKnown RBP23.19■■□□□ 1.3
RBFOX1-222ENST00000585867 DUSP27Q5VZP5 1158 aa23.19■■□□□ 1.3
RBFOX1-222ENST00000585867 DOT1LQ8TEK3 1739 aa23.19■■□□□ 1.3
RBFOX1-222ENST00000585867 KAT6BQ8WYB5 2073 aa23.19■■□□□ 1.3
RBFOX1-222ENST00000585867 ADAMTS7Q9UKP4 1686 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms