RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 PKD1L3Q7Z443 1732 aa18.78■□□□□ 0.6
SMARCD2-211ENST00000584483 GAS2L2Q8NHY3 880 aa18.78■□□□□ 0.6
SMARCD2-211ENST00000584483 TATP17735 454 aaPredicted RBP18.77■□□□□ 0.6
SMARCD2-211ENST00000584483 PLEKHO1Q53GL0 409 aaPredicted RBP18.77■□□□□ 0.6
SMARCD2-211ENST00000584483 MCM10Q7L590 875 aa18.77■□□□□ 0.6
SMARCD2-211ENST00000584483 C8orf37Q96NL8 207 aa18.77■□□□□ 0.6
SMARCD2-211ENST00000584483 BCL9LQ86UU0 1499 aa18.77■□□□□ 0.59
SMARCD2-211ENST00000584483 RAPGEF4Q8WZA2 1011 aa18.76■□□□□ 0.59
SMARCD2-211ENST00000584483 PARP4Q9UKK3 1724 aaKnown RBP18.76■□□□□ 0.59
SMARCD2-211ENST00000584483 OVOS2A0A0G2JMS6 1433 aa18.75■□□□□ 0.59
SMARCD2-211ENST00000584483 SHANK3Q9BYB0 1731 aa18.75■□□□□ 0.59
SMARCD2-211ENST00000584483 VIRMAQ69YN4 1812 aaKnown RBP18.75■□□□□ 0.59
SMARCD2-211ENST00000584483 E9PSI1 815 aa18.75■□□□□ 0.59
SMARCD2-211ENST00000584483 AMOTQ4VCS5 1084 aa18.75■□□□□ 0.59
SMARCD2-211ENST00000584483 ZNF530Q6P9A1 599 aaPredicted RBP18.75■□□□□ 0.59
SMARCD2-211ENST00000584483 FNBP4Q8N3X1 1017 aaPredicted RBP18.75■□□□□ 0.59
SMARCD2-211ENST00000584483 IL17REQ8NFR9 667 aa18.75■□□□□ 0.59
SMARCD2-211ENST00000584483 NGLY1Q96IV0 654 aa18.75■□□□□ 0.59
SMARCD2-211ENST00000584483 USP35Q9P2H5 1018 aa18.75■□□□□ 0.59
SMARCD2-211ENST00000584483 MAP3K5Q99683 1374 aa18.75■□□□□ 0.59
SMARCD2-211ENST00000584483 IL16Q14005 1332 aa18.74■□□□□ 0.59
SMARCD2-211ENST00000584483 DISP2A7MBM2 1401 aa18.74■□□□□ 0.59
SMARCD2-211ENST00000584483 WNK3Q9BYP7 1800 aa18.74■□□□□ 0.59
SMARCD2-211ENST00000584483 GNAT3A8MTJ3 354 aa18.74■□□□□ 0.59
SMARCD2-211ENST00000584483 ZNF853P0CG23 659 aa18.74■□□□□ 0.59
SMARCD2-211ENST00000584483 LRRC37A3O60309 1634 aa18.74■□□□□ 0.59
SMARCD2-211ENST00000584483 HTATSF1O43719 755 aaKnown RBP18.73■□□□□ 0.59
SMARCD2-211ENST00000584483 IL2RBP14784 551 aa18.73■□□□□ 0.59
SMARCD2-211ENST00000584483 LMOD3Q0VAK6 560 aa18.73■□□□□ 0.59
SMARCD2-211ENST00000584483 UNC5CLQ8IV45 518 aa18.73■□□□□ 0.59
SMARCD2-211ENST00000584483 LGR6Q9HBX8 967 aa18.73■□□□□ 0.59
SMARCD2-211ENST00000584483 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.73■□□□□ 0.59
SMARCD2-211ENST00000584483 SPATA31A1Q5TZJ5 1347 aa18.73■□□□□ 0.59
SMARCD2-211ENST00000584483 PLEKHG2Q9H7P9 1386 aa18.72■□□□□ 0.59
SMARCD2-211ENST00000584483 CYP27B1O15528 508 aa18.72■□□□□ 0.59
SMARCD2-211ENST00000584483 AKAP4Q5JQC9 854 aa18.72■□□□□ 0.59
SMARCD2-211ENST00000584483 ADAMTS7Q9UKP4 1686 aa18.72■□□□□ 0.59
SMARCD2-211ENST00000584483 SPATA31A5Q5VU36 1347 aa18.72■□□□□ 0.59
SMARCD2-211ENST00000584483 SPATA31A7Q8IWB4 1347 aa18.72■□□□□ 0.59
SMARCD2-211ENST00000584483 FBXO41Q8TF61 875 aa18.71■□□□□ 0.59
SMARCD2-211ENST00000584483 TSR2Q969E8 191 aaKnown RBP18.71■□□□□ 0.59
SMARCD2-211ENST00000584483 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.71■□□□□ 0.59
SMARCD2-211ENST00000584483 PHKG2P15735 406 aa18.7■□□□□ 0.58
SMARCD2-211ENST00000584483 SPG7Q9UQ90 795 aa18.7■□□□□ 0.58
SMARCD2-211ENST00000584483 FANCIQ9NVI1 1328 aa18.7■□□□□ 0.58
SMARCD2-211ENST00000584483 CEMIPQ8WUJ3 1361 aa18.69■□□□□ 0.58
SMARCD2-211ENST00000584483 MPRIPQ6WCQ1 1025 aa18.69■□□□□ 0.58
SMARCD2-211ENST00000584483 ZCRB1Q8TBF4 217 aaKnown RBP18.69■□□□□ 0.58
SMARCD2-211ENST00000584483 RTF1Q92541 710 aaKnown RBP18.69■□□□□ 0.58
SMARCD2-211ENST00000584483 SCN11AQ9UI33 1791 aa18.68■□□□□ 0.58
SMARCD2-211ENST00000584483 RNMTO43148 476 aaKnown RBP18.68■□□□□ 0.58
SMARCD2-211ENST00000584483 VPS72Q15906 364 aa18.68■□□□□ 0.58
SMARCD2-211ENST00000584483 IFT57Q9NWB7 429 aa18.68■□□□□ 0.58
SMARCD2-211ENST00000584483 LAS1LQ9Y4W2 734 aaKnown RBP18.68■□□□□ 0.58
SMARCD2-211ENST00000584483 KDM6AO15550 1401 aaPredicted RBP18.67■□□□□ 0.58
SMARCD2-211ENST00000584483 CHL1O00533 1208 aa18.67■□□□□ 0.58
SMARCD2-211ENST00000584483 MEX3CQ5U5Q3 659 aaKnown RBP18.67■□□□□ 0.58
SMARCD2-211ENST00000584483 CFAP44Q96MT7 982 aa18.67■□□□□ 0.58
SMARCD2-211ENST00000584483 MYH16Q9H6N6 1097 aa18.67■□□□□ 0.58
SMARCD2-211ENST00000584483 MBIPQ9NS73 344 aa18.67■□□□□ 0.58
SMARCD2-211ENST00000584483 MIS18AQ9NYP9 233 aa18.67■□□□□ 0.58
SMARCD2-211ENST00000584483 USP21Q9UK80 565 aa18.67■□□□□ 0.58
SMARCD2-211ENST00000584483 AFF2P51816 1311 aa18.67■□□□□ 0.58
SMARCD2-211ENST00000584483 SIPA1L3O60292 1781 aaPredicted RBP18.66■□□□□ 0.58
SMARCD2-211ENST00000584483 GNAI1P63096 354 aa18.66■□□□□ 0.58
SMARCD2-211ENST00000584483 CALD1Q05682 793 aaKnown RBP18.66■□□□□ 0.58
SMARCD2-211ENST00000584483 C1orf141Q5JVX7 400 aa18.66■□□□□ 0.58
SMARCD2-211ENST00000584483 IFNL2Q8IZJ0 200 aa18.66■□□□□ 0.58
SMARCD2-211ENST00000584483 EXOSC9Q06265 439 aaKnown RBP18.65■□□□□ 0.58
SMARCD2-211ENST00000584483 THRAP3Q9Y2W1 955 aaKnown RBP18.65■□□□□ 0.58
SMARCD2-211ENST00000584483 SUPT16HQ9Y5B9 1047 aaKnown RBP18.65■□□□□ 0.58
SMARCD2-211ENST00000584483 BARGINQ6ZT62 677 aa18.64■□□□□ 0.57
SMARCD2-211ENST00000584483 GLI3P10071 1580 aa18.64■□□□□ 0.57
SMARCD2-211ENST00000584483 CCDC9Q9Y3X0 531 aaKnown RBP18.63■□□□□ 0.57
SMARCD2-211ENST00000584483 NKX1-1Q15270 411 aaPredicted RBP18.62■□□□□ 0.57
SMARCD2-211ENST00000584483 TAF7Q15545 349 aaPredicted RBP18.62■□□□□ 0.57
SMARCD2-211ENST00000584483 DDX54Q8TDD1 881 aaKnown RBP18.62■□□□□ 0.57
SMARCD2-211ENST00000584483 RCAN3Q9UKA8 241 aa18.62■□□□□ 0.57
SMARCD2-211ENST00000584483 PCDH11XQ9BZA7 1347 aa18.62■□□□□ 0.57
SMARCD2-211ENST00000584483 PCDH11YQ9BZA8 1340 aa18.62■□□□□ 0.57
SMARCD2-211ENST00000584483 ATRNO75882 1429 aa18.62■□□□□ 0.57
SMARCD2-211ENST00000584483 TOGARAM1Q9Y4F4 1720 aa18.61■□□□□ 0.57
SMARCD2-211ENST00000584483 TSPYL6Q8N831 410 aa18.61■□□□□ 0.57
SMARCD2-211ENST00000584483 KDM3BQ7LBC6 1761 aa18.6■□□□□ 0.57
SMARCD2-211ENST00000584483 RNF123Q5XPI4 1314 aa18.6■□□□□ 0.57
SMARCD2-211ENST00000584483 FAM98CQ17RN3 349 aaKnown RBP18.6■□□□□ 0.57
SMARCD2-211ENST00000584483 KRT24Q2M2I5 525 aa18.6■□□□□ 0.57
SMARCD2-211ENST00000584483 C8orf58Q8NAV2 365 aa18.6■□□□□ 0.57
SMARCD2-211ENST00000584483 DCAF5Q96JK2 942 aa18.6■□□□□ 0.57
SMARCD2-211ENST00000584483 TNS2Q63HR2 1409 aa18.59■□□□□ 0.57
SMARCD2-211ENST00000584483 EXOC5O00471 708 aa18.59■□□□□ 0.57
SMARCD2-211ENST00000584483 CDCA7Q9BWT1 371 aaPredicted RBP18.59■□□□□ 0.57
SMARCD2-211ENST00000584483 MRC1P22897 1456 aa18.58■□□□□ 0.57
SMARCD2-211ENST00000584483 THSD7AQ9UPZ6 1657 aa18.58■□□□□ 0.57
SMARCD2-211ENST00000584483 KCNQ3O43525 872 aa18.58■□□□□ 0.56
SMARCD2-211ENST00000584483 GJD4Q96KN9 370 aaPredicted RBP18.58■□□□□ 0.56
SMARCD2-211ENST00000584483 TSPYL4Q9UJ04 414 aa18.58■□□□□ 0.56
SMARCD2-211ENST00000584483 TEFQ10587 303 aa18.57■□□□□ 0.56
SMARCD2-211ENST00000584483 SLC52A2Q9HAB3 445 aa18.57■□□□□ 0.56
SMARCD2-211ENST00000584483 ELL2O00472 640 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms