RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 PALM3A6NDB9 673 aaPredicted RBP7.85□□□□□ -1.15
SKA2-210ENST00000584089 ARID3CA6NKF2 412 aa7.85□□□□□ -1.15
SKA2-210ENST00000584089 EML3Q32P44 896 aa7.85□□□□□ -1.15
SKA2-210ENST00000584089 OSBPL3Q9H4L5 887 aa7.85□□□□□ -1.15
SKA2-210ENST00000584089 BMP1P13497 986 aa7.84□□□□□ -1.15
SKA2-210ENST00000584089 CYP2U1Q7Z449 544 aa7.84□□□□□ -1.15
SKA2-210ENST00000584089 LINC00528Q8N1L1 170 aa7.84□□□□□ -1.15
SKA2-210ENST00000584089 AGBL1Q96MI9 1066 aa7.84□□□□□ -1.15
SKA2-210ENST00000584089 MAFBQ9Y5Q3 323 aaPredicted RBP7.84□□□□□ -1.15
SKA2-210ENST00000584089 USP17L3A6NCW0 530 aa7.83□□□□□ -1.16
SKA2-210ENST00000584089 USP17L4A6NCW7 530 aa7.83□□□□□ -1.16
SKA2-210ENST00000584089 ATP5J2-PTCD1G3V325 749 aa7.83□□□□□ -1.16
SKA2-210ENST00000584089 PTGIRP43119 386 aa7.83□□□□□ -1.16
SKA2-210ENST00000584089 NCOA4Q13772 614 aa7.83□□□□□ -1.16
SKA2-210ENST00000584089 USP17L2Q6R6M4 530 aa7.83□□□□□ -1.16
SKA2-210ENST00000584089 USP17L1Q7RTZ2 530 aa7.83□□□□□ -1.16
SKA2-210ENST00000584089 KDF1Q8NAX2 398 aaPredicted RBP7.83□□□□□ -1.16
SKA2-210ENST00000584089 SENP2Q9HC62 589 aa7.83□□□□□ -1.16
SKA2-210ENST00000584089 SERPINA10Q9UK55 444 aa7.83□□□□□ -1.16
SKA2-210ENST00000584089 NOD1Q9Y239 953 aa7.83□□□□□ -1.16
SKA2-210ENST00000584089 SPINT1O43278 529 aa7.82□□□□□ -1.16
SKA2-210ENST00000584089 BMP2P12643 396 aa7.82□□□□□ -1.16
SKA2-210ENST00000584089 RELBQ01201 579 aa7.82□□□□□ -1.16
SKA2-210ENST00000584089 DEPDC4Q8N2C3 294 aa7.82□□□□□ -1.16
SKA2-210ENST00000584089 CCDC97Q96F63 343 aaPredicted RBP7.82□□□□□ -1.16
SKA2-210ENST00000584089 GNRH1P01148 92 aa7.81□□□□□ -1.16
SKA2-210ENST00000584089 C6orf118Q5T5N4 469 aa7.81□□□□□ -1.16
SKA2-210ENST00000584089 TRIM50Q86XT4 487 aa7.81□□□□□ -1.16
SKA2-210ENST00000584089 KIFC2Q96AC6 838 aa7.81□□□□□ -1.16
SKA2-210ENST00000584089 ZFP42Q96MM3 310 aa7.81□□□□□ -1.16
SKA2-210ENST00000584089 PURBQ96QR8 312 aaKnown RBP7.81□□□□□ -1.16
SKA2-210ENST00000584089 LMOD1P29536 600 aaPredicted RBP7.8□□□□□ -1.16
SKA2-210ENST00000584089 CFAP70Q5T0N1 1121 aa7.8□□□□□ -1.16
SKA2-210ENST00000584089 C1orf115Q9H7X2 142 aa7.8□□□□□ -1.16
SKA2-210ENST00000584089 GMPR2Q9P2T1 348 aaKnown RBP7.8□□□□□ -1.16
SKA2-210ENST00000584089 PCDHGA11Q9Y5H2 935 aa7.8□□□□□ -1.16
SKA2-210ENST00000584089 TRIM47Q96LD4 638 aa7.79□□□□□ -1.16
SKA2-210ENST00000584089 ZNF395Q9H8N7 513 aaPredicted RBP7.79□□□□□ -1.16
SKA2-210ENST00000584089 MKRN1Q9UHC7 482 aaKnown RBP7.79□□□□□ -1.16
SKA2-210ENST00000584089 A0A1W2PRU2 124 aa7.78□□□□□ -1.16
SKA2-210ENST00000584089 SUPT5HO00267 1087 aaKnown RBP7.78□□□□□ -1.16
SKA2-210ENST00000584089 ATP1A2P50993 1020 aa7.78□□□□□ -1.16
SKA2-210ENST00000584089 GTF2IP78347 998 aa7.78□□□□□ -1.16
SKA2-210ENST00000584089 CLN3Q13286 438 aa7.78□□□□□ -1.16
SKA2-210ENST00000584089 CCDC82Q8N4S0 544 aa7.78□□□□□ -1.16
SKA2-210ENST00000584089 INSM2Q96T92 566 aaPredicted RBP7.78□□□□□ -1.16
SKA2-210ENST00000584089 SOS2Q07890 1332 aaPredicted RBP7.78□□□□□ -1.16
SKA2-210ENST00000584089 ESCO1Q5FWF5 840 aa7.77□□□□□ -1.17
SKA2-210ENST00000584089 ARHGEF10LQ9HCE6 1279 aa7.77□□□□□ -1.17
SKA2-210ENST00000584089 TTLL8A6PVC2 850 aa7.76□□□□□ -1.17
SKA2-210ENST00000584089 POTECB2RU33 542 aa7.76□□□□□ -1.17
SKA2-210ENST00000584089 C11orf95C9JLR9 678 aaPredicted RBP7.76□□□□□ -1.17
SKA2-210ENST00000584089 MEN1O00255 615 aa7.76□□□□□ -1.17
SKA2-210ENST00000584089 GPC1P35052 558 aa7.76□□□□□ -1.17
SKA2-210ENST00000584089 CTSOP43234 321 aaPredicted RBP7.76□□□□□ -1.17
SKA2-210ENST00000584089 KANK4Q5T7N3 995 aaPredicted RBP7.76□□□□□ -1.17
SKA2-210ENST00000584089 XAGE2Q96GT9 111 aa7.76□□□□□ -1.17
SKA2-210ENST00000584089 NLRP3Q96P20 1036 aa7.76□□□□□ -1.17
SKA2-210ENST00000584089 ESYT1Q9BSJ8 1104 aa7.76□□□□□ -1.17
SKA2-210ENST00000584089 VRTNQ9H8Y1 702 aa7.76□□□□□ -1.17
SKA2-210ENST00000584089 WASLO00401 505 aaPredicted RBP7.75□□□□□ -1.17
SKA2-210ENST00000584089 RNF144AP50876 292 aaPredicted RBP7.75□□□□□ -1.17
SKA2-210ENST00000584089 SCNN1DP51172 638 aa7.75□□□□□ -1.17
SKA2-210ENST00000584089 GDF10P55107 478 aa7.75□□□□□ -1.17
SKA2-210ENST00000584089 ZNF787Q6DD87 383 aa7.75□□□□□ -1.17
SKA2-210ENST00000584089 LARGE2Q8N3Y3 721 aa7.75□□□□□ -1.17
SKA2-210ENST00000584089 OGFOD1Q8N543 542 aa7.75□□□□□ -1.17
SKA2-210ENST00000584089 CNKSR1Q969H4 720 aa7.75□□□□□ -1.17
SKA2-210ENST00000584089 ETNK1Q9HBU6 452 aa7.75□□□□□ -1.17
SKA2-210ENST00000584089 POLMQ9NP87 494 aaPredicted RBP7.75□□□□□ -1.17
SKA2-210ENST00000584089 RAB6BQ9NRW1 208 aa7.75□□□□□ -1.17
SKA2-210ENST00000584089 DNAAF2Q9NVR5 837 aaKnown RBP7.75□□□□□ -1.17
SKA2-210ENST00000584089 ZBTB7BO15156 539 aaPredicted RBP7.74□□□□□ -1.17
SKA2-210ENST00000584089 IL2RAP01589 272 aa7.74□□□□□ -1.17
SKA2-210ENST00000584089 INHAP05111 366 aa7.74□□□□□ -1.17
SKA2-210ENST00000584089 SNRPBP14678 240 aaKnown RBP7.74□□□□□ -1.17
SKA2-210ENST00000584089 RASA1P20936 1047 aa7.74□□□□□ -1.17
SKA2-210ENST00000584089 RFX1P22670 979 aa7.74□□□□□ -1.17
SKA2-210ENST00000584089 CLDN10P78369 228 aa7.74□□□□□ -1.17
SKA2-210ENST00000584089 PSME1Q06323 249 aa7.74□□□□□ -1.17
SKA2-210ENST00000584089 HRH3Q9Y5N1 445 aa7.74□□□□□ -1.17
SKA2-210ENST00000584089 TMEM229AB2RXF0 380 aa7.73□□□□□ -1.17
SKA2-210ENST00000584089 MAN1A2O60476 641 aa7.73□□□□□ -1.17
SKA2-210ENST00000584089 FOXD4L5Q5VV16 416 aaPredicted RBP7.73□□□□□ -1.17
SKA2-210ENST00000584089 LARP1Q6PKG0 1096 aaKnown RBP7.73□□□□□ -1.17
SKA2-210ENST00000584089 FAM196BA6NMK8 535 aa7.72□□□□□ -1.17
SKA2-210ENST00000584089 STAU1O95793 577 aaKnown RBP7.72□□□□□ -1.17
SKA2-210ENST00000584089 SRPK2P78362 688 aaKnown RBP7.72□□□□□ -1.17
SKA2-210ENST00000584089 CENPCQ03188 943 aa7.72□□□□□ -1.17
SKA2-210ENST00000584089 CCDC102BQ68D86 513 aa7.72□□□□□ -1.17
SKA2-210ENST00000584089 SIX5Q8N196 739 aa7.72□□□□□ -1.17
SKA2-210ENST00000584089 TPCN2Q8NHX9 752 aa7.72□□□□□ -1.17
SKA2-210ENST00000584089 RNF217Q8TC41 542 aa7.72□□□□□ -1.17
SKA2-210ENST00000584089 SLC4A9Q96Q91 983 aa7.72□□□□□ -1.17
SKA2-210ENST00000584089 DNMT3LQ9UJW3 386 aa7.72□□□□□ -1.17
SKA2-210ENST00000584089 KIAA1024Q9UPX6 916 aa7.72□□□□□ -1.17
SKA2-210ENST00000584089 FIGNL2A6NMB9 653 aa7.71□□□□□ -1.18
SKA2-210ENST00000584089 BACH1O14867 736 aa7.71□□□□□ -1.18
SKA2-210ENST00000584089 PTK7Q13308 1070 aa7.71□□□□□ -1.18
SKA2-210ENST00000584089 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms