RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 RAPGEF4Q8WZA2 1011 aa29.5■■■□□ 2.31
PPP4R1-228ENST00000584074 LRP5O75197 1615 aa29.49■■■□□ 2.31
PPP4R1-228ENST00000584074 KIF7Q2M1P5 1343 aa29.49■■■□□ 2.31
PPP4R1-228ENST00000584074 WASHC2AQ641Q2 1341 aa29.49■■■□□ 2.31
PPP4R1-228ENST00000584074 ANO8Q9HCE9 1232 aaPredicted RBP29.48■■■□□ 2.31
PPP4R1-228ENST00000584074 ANKRD26Q9UPS8 1709 aa29.47■■■□□ 2.31
PPP4R1-228ENST00000584074 TATP17735 454 aaPredicted RBP29.46■■■□□ 2.31
PPP4R1-228ENST00000584074 NSD2O96028 1365 aa29.44■■■□□ 2.3
PPP4R1-228ENST00000584074 SHANK3Q9BYB0 1731 aa29.43■■■□□ 2.3
PPP4R1-228ENST00000584074 PRIM1P49642 420 aaKnown RBP29.42■■■□□ 2.3
PPP4R1-228ENST00000584074 SYTL4Q96C24 671 aaPredicted RBP29.42■■■□□ 2.3
PPP4R1-228ENST00000584074 KNSTRNQ9Y448 316 aa29.42■■■□□ 2.3
PPP4R1-228ENST00000584074 MAP2P11137 1827 aaKnown RBP29.42■■■□□ 2.3
PPP4R1-228ENST00000584074 BTAF1O14981 1849 aa29.41■■■□□ 2.3
PPP4R1-228ENST00000584074 MORC1Q86VD1 984 aa29.4■■■□□ 2.3
PPP4R1-228ENST00000584074 EYA1Q99502 592 aa29.4■■■□□ 2.3
PPP4R1-228ENST00000584074 NCAPD2Q15021 1401 aa29.39■■■□□ 2.3
PPP4R1-228ENST00000584074 EIF4A2Q14240 407 aaKnown RBP29.38■■■□□ 2.29
PPP4R1-228ENST00000584074 PCDH11XQ9BZA7 1347 aa29.37■■■□□ 2.29
PPP4R1-228ENST00000584074 PCDH11YQ9BZA8 1340 aa29.37■■■□□ 2.29
PPP4R1-228ENST00000584074 STK32BQ9NY57 414 aa29.36■■■□□ 2.29
PPP4R1-228ENST00000584074 DOT1LQ8TEK3 1739 aa29.35■■■□□ 2.29
PPP4R1-228ENST00000584074 AMER1Q5JTC6 1135 aaPredicted RBP29.35■■■□□ 2.29
PPP4R1-228ENST00000584074 PDGFDQ9GZP0 370 aaPredicted RBP29.35■■■□□ 2.29
PPP4R1-228ENST00000584074 CYP27B1O15528 508 aa29.34■■■□□ 2.29
PPP4R1-228ENST00000584074 SLC15A2Q16348 729 aa29.34■■■□□ 2.29
PPP4R1-228ENST00000584074 LRRC4BQ9NT99 713 aa29.34■■■□□ 2.29
PPP4R1-228ENST00000584074 KAT6BQ8WYB5 2073 aa29.32■■■□□ 2.28
PPP4R1-228ENST00000584074 PER1O15534 1290 aaPredicted RBP29.3■■■□□ 2.28
PPP4R1-228ENST00000584074 SPON1Q9HCB6 807 aa29.3■■■□□ 2.28
PPP4R1-228ENST00000584074 SPG7Q9UQ90 795 aa29.29■■■□□ 2.28
PPP4R1-228ENST00000584074 KCNQ4P56696 695 aa29.28■■■□□ 2.28
PPP4R1-228ENST00000584074 PAPPAQ13219 1627 aa29.27■■■□□ 2.28
PPP4R1-228ENST00000584074 CASZ1Q86V15 1759 aa29.27■■■□□ 2.28
PPP4R1-228ENST00000584074 SLC27A3Q5K4L6 730 aa29.27■■■□□ 2.28
PPP4R1-228ENST00000584074 PKD1L3Q7Z443 1732 aa29.27■■■□□ 2.28
PPP4R1-228ENST00000584074 IGSF1Q8N6C5 1336 aa29.26■■■□□ 2.27
PPP4R1-228ENST00000584074 ZNF827Q17R98 1081 aa29.26■■■□□ 2.27
PPP4R1-228ENST00000584074 ZBTB7AO95365 584 aa29.25■■■□□ 2.27
PPP4R1-228ENST00000584074 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.25■■■□□ 2.271e-8■□□□□ 10.5
PPP4R1-228ENST00000584074 NKX1-1Q15270 411 aaPredicted RBP29.23■■■□□ 2.27
PPP4R1-228ENST00000584074 CC2D1BQ5T0F9 858 aaKnown RBP29.23■■■□□ 2.27
PPP4R1-228ENST00000584074 MPRIPQ6WCQ1 1025 aa29.23■■■□□ 2.27
PPP4R1-228ENST00000584074 AKT1S1Q96B36 256 aa29.21■■■□□ 2.27
PPP4R1-228ENST00000584074 PPP1R1BQ9UD71 204 aaPredicted RBP29.2■■■□□ 2.26
PPP4R1-228ENST00000584074 CCNL1Q9UK58 526 aaPredicted RBP29.2■■■□□ 2.26
PPP4R1-228ENST00000584074 ATF5Q9Y2D1 282 aaPredicted RBP29.2■■■□□ 2.26
PPP4R1-228ENST00000584074 PHKG2P15735 406 aa29.19■■■□□ 2.26
PPP4R1-228ENST00000584074 TOGARAM1Q9Y4F4 1720 aa29.19■■■□□ 2.26
PPP4R1-228ENST00000584074 LY75O60449 1722 aa29.18■■■□□ 2.26
PPP4R1-228ENST00000584074 MTHFSP49914 203 aa29.18■■■□□ 2.26
PPP4R1-228ENST00000584074 AEBP1Q8IUX7 1158 aa29.18■■■□□ 2.26
PPP4R1-228ENST00000584074 IFNL2Q8IZJ0 200 aa29.18■■■□□ 2.26
PPP4R1-228ENST00000584074 CNGB1Q14028 1251 aaPredicted RBP29.17■■■□□ 2.26
PPP4R1-228ENST00000584074 IL13P35225 146 aa29.16■■■□□ 2.26
PPP4R1-228ENST00000584074 PTGER2P43116 358 aa29.16■■■□□ 2.26
PPP4R1-228ENST00000584074 PIGBQ92521 554 aa29.16■■■□□ 2.26
PPP4R1-228ENST00000584074 PLEKHG2Q9H7P9 1386 aa29.15■■■□□ 2.26
PPP4R1-228ENST00000584074 PALLDQ8WX93 1383 aa29.14■■■□□ 2.26
PPP4R1-228ENST00000584074 MTFR1LQ9H019 292 aa29.14■■■□□ 2.26
PPP4R1-228ENST00000584074 SULT6B1Q6IMI4 303 aa29.13■■■□□ 2.25
PPP4R1-228ENST00000584074 TFCP2L1Q9NZI6 479 aa29.13■■■□□ 2.25
PPP4R1-228ENST00000584074 PLEKHO1Q53GL0 409 aaPredicted RBP29.12■■■□□ 2.25
PPP4R1-228ENST00000584074 NPC1L1Q9UHC9 1359 aa29.12■■■□□ 2.25
PPP4R1-228ENST00000584074 TMOD3Q9NYL9 352 aa29.11■■■□□ 2.25
PPP4R1-228ENST00000584074 PNPLA7Q6ZV29 1317 aa29.11■■■□□ 2.25
PPP4R1-228ENST00000584074 SMARCC1Q92922 1105 aaPredicted RBP29.1■■■□□ 2.25
PPP4R1-228ENST00000584074 ITGB4P16144 1822 aa29.1■■■□□ 2.25
PPP4R1-228ENST00000584074 ZNF530Q6P9A1 599 aaPredicted RBP29.09■■■□□ 2.25
PPP4R1-228ENST00000584074 KDRP35968 1356 aa29.09■■■□□ 2.25
PPP4R1-228ENST00000584074 AMOTQ4VCS5 1084 aa29.08■■■□□ 2.25
PPP4R1-228ENST00000584074 SGIP1Q9BQI5 828 aa29.08■■■□□ 2.25
PPP4R1-228ENST00000584074 ASAP1Q9ULH1 1129 aa29.06■■■□□ 2.24
PPP4R1-228ENST00000584074 DCAF5Q96JK2 942 aa29.05■■■□□ 2.24
PPP4R1-228ENST00000584074 HSP90AB1P08238 724 aaKnown RBP29.04■■■□□ 2.24
PPP4R1-228ENST00000584074 DIAPH1O60610 1272 aaKnown RBP29.03■■■□□ 2.24
PPP4R1-228ENST00000584074 SLC16A10Q8TF71 515 aa29.03■■■□□ 2.24
PPP4R1-228ENST00000584074 QSER1Q2KHR3 1735 aa29.03■■■□□ 2.24
PPP4R1-228ENST00000584074 ERVV-2B6SEH9 535 aa29.02■■■□□ 2.24
PPP4R1-228ENST00000584074 HMOX1P09601 288 aa29.02■■■□□ 2.24
PPP4R1-228ENST00000584074 KDM6AO15550 1401 aaPredicted RBP29.02■■■□□ 2.24
PPP4R1-228ENST00000584074 TUBGCP6Q96RT7 1819 aa29.01■■■□□ 2.24
PPP4R1-228ENST00000584074 LOC102724428A0A0B4J2F2 783 aa29.01■■■□□ 2.23
PPP4R1-228ENST00000584074 SIK1P57059 783 aa29.01■■■□□ 2.23
PPP4R1-228ENST00000584074 C1orf141Q5JVX7 400 aa29.01■■■□□ 2.23
PPP4R1-228ENST00000584074 ATG3Q9NT62 314 aa29.01■■■□□ 2.23
PPP4R1-228ENST00000584074 C5P01031 1676 aa29.01■■■□□ 2.23
PPP4R1-228ENST00000584074 COL23A1Q86Y22 540 aaPredicted RBP29■■■□□ 2.23
PPP4R1-228ENST00000584074 MSH5O43196 834 aa28.99■■■□□ 2.23
PPP4R1-228ENST00000584074 ARXQ96QS3 562 aa28.99■■■□□ 2.23
PPP4R1-228ENST00000584074 HMGB2P26583 209 aaKnown RBP28.98■■■□□ 2.23
PPP4R1-228ENST00000584074 FHDC1Q9C0D6 1143 aaPredicted RBP28.98■■■□□ 2.23
PPP4R1-228ENST00000584074 CABP4P57796 275 aa28.97■■■□□ 2.23
PPP4R1-228ENST00000584074 COL3A1P02461 1466 aaPredicted RBP28.97■■■□□ 2.23
PPP4R1-228ENST00000584074 TAF1LQ8IZX4 1826 aa28.95■■■□□ 2.23
PPP4R1-228ENST00000584074 ITPK1Q13572 414 aa28.95■■■□□ 2.22
PPP4R1-228ENST00000584074 LINC00116Q8NCU8 138 aa28.95■■■□□ 2.22
PPP4R1-228ENST00000584074 AK7Q96M32 723 aa28.95■■■□□ 2.22
PPP4R1-228ENST00000584074 C4BP0C0L5 1744 aa28.94■■■□□ 2.22
PPP4R1-228ENST00000584074 ATP6V1AP38606 617 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms