RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	TRIM37	O94972	964 aa		13.31	□□□□□ -0.28
NARF-222	ENST00000583908	DDX10	Q13206	875 aa	Known RBP	13.31	□□□□□ -0.28
NARF-222	ENST00000583908	MARCH10	Q8NA82	808 aa	Predicted RBP	13.31	□□□□□ -0.28
NARF-222	ENST00000583908	DDX54	Q8TDD1	881 aa	Known RBP	13.31	□□□□□ -0.28
NARF-222	ENST00000583908	NUDC	Q9Y266	331 aa		13.31	□□□□□ -0.28
NARF-222	ENST00000583908	RGPD2	P0DJD1	1756 aa		13.3	□□□□□ -0.28
NARF-222	ENST00000583908	RALBP1	Q15311	655 aa		13.3	□□□□□ -0.28
NARF-222	ENST00000583908	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.3	□□□□□ -0.28	7e-7	■■□□□ 12.2
NARF-222	ENST00000583908	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.29	□□□□□ -0.28
NARF-222	ENST00000583908	APBA3	O96018	575 aa		13.29	□□□□□ -0.28
NARF-222	ENST00000583908	AMOT	Q4VCS5	1084 aa		13.29	□□□□□ -0.28
NARF-222	ENST00000583908	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.29	□□□□□ -0.28
NARF-222	ENST00000583908	TNS1	Q9HBL0	1735 aa	Known RBP	13.29	□□□□□ -0.28
NARF-222	ENST00000583908	HSP90AB1	P08238	724 aa	Known RBP	13.28	□□□□□ -0.28
NARF-222	ENST00000583908	IL13	P35225	146 aa		13.28	□□□□□ -0.28
NARF-222	ENST00000583908	NHS	Q6T4R5	1651 aa		13.28	□□□□□ -0.28
NARF-222	ENST00000583908	PKD1L3	Q7Z443	1732 aa		13.27	□□□□□ -0.28
NARF-222	ENST00000583908	PPP2R1A	P30153	589 aa		13.27	□□□□□ -0.29
NARF-222	ENST00000583908	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.27	□□□□□ -0.29
NARF-222	ENST00000583908	SULT6B1	Q6IMI4	303 aa		13.27	□□□□□ -0.29
NARF-222	ENST00000583908	KDR	P35968	1356 aa		13.27	□□□□□ -0.29
NARF-222	ENST00000583908	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.26	□□□□□ -0.29
NARF-222	ENST00000583908	U2SURP	O15042	1029 aa	Known RBP	13.26	□□□□□ -0.29
NARF-222	ENST00000583908	HMGB2	P26583	209 aa	Known RBP	13.26	□□□□□ -0.29
NARF-222	ENST00000583908	C1orf141	Q5JVX7	400 aa		13.26	□□□□□ -0.29
NARF-222	ENST00000583908	RGPD4	Q7Z3J3	1758 aa		13.26	□□□□□ -0.29
NARF-222	ENST00000583908	NEFM	P07197	916 aa		13.25	□□□□□ -0.29
NARF-222	ENST00000583908	DEFB132	Q7Z7B7	95 aa		13.25	□□□□□ -0.29
NARF-222	ENST00000583908	IFNL2	Q8IZJ0	200 aa		13.25	□□□□□ -0.29
NARF-222	ENST00000583908	SYTL4	Q96C24	671 aa	Predicted RBP	13.25	□□□□□ -0.29
NARF-222	ENST00000583908	COL3A1	P02461	1466 aa	Predicted RBP	13.24	□□□□□ -0.29
NARF-222	ENST00000583908	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.24	□□□□□ -0.29
NARF-222	ENST00000583908	ACSBG1	Q96GR2	724 aa		13.24	□□□□□ -0.29
NARF-222	ENST00000583908	DOT1L	Q8TEK3	1739 aa		13.24	□□□□□ -0.29
NARF-222	ENST00000583908	SHANK3	Q9BYB0	1731 aa		13.24	□□□□□ -0.29
NARF-222	ENST00000583908	SBF2	Q86WG5	1849 aa		13.23	□□□□□ -0.29
NARF-222	ENST00000583908	PLSCR1	O15162	318 aa		13.23	□□□□□ -0.29
NARF-222	ENST00000583908	EN1	Q05925	392 aa	Predicted RBP	13.23	□□□□□ -0.29
NARF-222	ENST00000583908	NBPF14	Q5TI25	921 aa		13.22	□□□□□ -0.29
NARF-222	ENST00000583908	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.22	□□□□□ -0.29
NARF-222	ENST00000583908	PNN	Q9H307	717 aa	Known RBP	13.22	□□□□□ -0.29
NARF-222	ENST00000583908	HMOX1	P09601	288 aa		13.21	□□□□□ -0.29
NARF-222	ENST00000583908	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.21	□□□□□ -0.29
NARF-222	ENST00000583908	PHKG2	P15735	406 aa		13.21	□□□□□ -0.29
NARF-222	ENST00000583908	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
NARF-222	ENST00000583908	AEBP1	Q8IUX7	1158 aa		13.21	□□□□□ -0.29
NARF-222	ENST00000583908	CYP27B1	O15528	508 aa		13.2	□□□□□ -0.3
NARF-222	ENST00000583908	PRIM1	P49642	420 aa	Known RBP	13.2	□□□□□ -0.3
NARF-222	ENST00000583908	NKX1-1	Q15270	411 aa	Predicted RBP	13.2	□□□□□ -0.3
NARF-222	ENST00000583908	EZH2	Q15910	746 aa	Known RBP	13.2	□□□□□ -0.3
NARF-222	ENST00000583908	GAS2L2	Q8NHY3	880 aa		13.2	□□□□□ -0.3
NARF-222	ENST00000583908	DCAF5	Q96JK2	942 aa		13.2	□□□□□ -0.3
NARF-222	ENST00000583908	CAMKK2	Q96RR4	588 aa		13.2	□□□□□ -0.3
NARF-222	ENST00000583908	AKAP4	Q5JQC9	854 aa		13.19	□□□□□ -0.3
NARF-222	ENST00000583908	SLC27A3	Q5K4L6	730 aa		13.19	□□□□□ -0.3
NARF-222	ENST00000583908	SMARCC1	Q92922	1105 aa	Predicted RBP	13.19	□□□□□ -0.3
NARF-222	ENST00000583908	TMOD3	Q9NYL9	352 aa		13.19	□□□□□ -0.3
NARF-222	ENST00000583908	RREB1	Q92766	1687 aa		13.18	□□□□□ -0.3
NARF-222	ENST00000583908	BTAF1	O14981	1849 aa		13.18	□□□□□ -0.3
NARF-222	ENST00000583908	ANP32C	O43423	234 aa		13.18	□□□□□ -0.3
NARF-222	ENST00000583908	KCNQ2	O43526	872 aa		13.18	□□□□□ -0.3
NARF-222	ENST00000583908	ERVV-2	B6SEH9	535 aa		13.17	□□□□□ -0.3
NARF-222	ENST00000583908	FCHSD2	O94868	740 aa		13.17	□□□□□ -0.3
NARF-222	ENST00000583908	WDR43	Q15061	677 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
NARF-222	ENST00000583908	MPRIP	Q6WCQ1	1025 aa		13.17	□□□□□ -0.3
NARF-222	ENST00000583908	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.17	□□□□□ -0.3
NARF-222	ENST00000583908	MAPK8IP3	Q9UPT6	1336 aa		13.16	□□□□□ -0.3
NARF-222	ENST00000583908	KAT6B	Q8WYB5	2073 aa		13.16	□□□□□ -0.3
NARF-222	ENST00000583908	PRKAR2B	P31323	418 aa		13.16	□□□□□ -0.3
NARF-222	ENST00000583908	CABP4	P57796	275 aa		13.15	□□□□□ -0.3
NARF-222	ENST00000583908	TXNRD1	Q16881	649 aa		13.15	□□□□□ -0.3
NARF-222	ENST00000583908	STK32B	Q9NY57	414 aa		13.15	□□□□□ -0.3
NARF-222	ENST00000583908	NUP188	Q5SRE5	1749 aa		13.15	□□□□□ -0.3
NARF-222	ENST00000583908	PALLD	Q8WX93	1383 aa		13.15	□□□□□ -0.3
NARF-222	ENST00000583908	MAP3K5	Q99683	1374 aa		13.15	□□□□□ -0.3
NARF-222	ENST00000583908	RTF1	Q92541	710 aa	Known RBP	13.14	□□□□□ -0.31
NARF-222	ENST00000583908	RSPH6A	Q9H0K4	717 aa		13.14	□□□□□ -0.31
NARF-222	ENST00000583908	TOGARAM1	Q9Y4F4	1720 aa		13.13	□□□□□ -0.31
NARF-222	ENST00000583908	GNAT3	A8MTJ3	354 aa		13.13	□□□□□ -0.31
NARF-222	ENST00000583908	PTF1A	Q7RTS3	328 aa		13.13	□□□□□ -0.31
NARF-222	ENST00000583908	CCNL1	Q9UK58	526 aa	Predicted RBP	13.13	□□□□□ -0.31
NARF-222	ENST00000583908	MTHFSD	Q2M296	383 aa	Known RBP	13.12	□□□□□ -0.31
NARF-222	ENST00000583908	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.12	□□□□□ -0.31
NARF-222	ENST00000583908	KDM6A	O15550	1401 aa	Predicted RBP	13.12	□□□□□ -0.31
NARF-222	ENST00000583908	TEF	Q10587	303 aa		13.11	□□□□□ -0.31
NARF-222	ENST00000583908	PIGB	Q92521	554 aa		13.11	□□□□□ -0.31
NARF-222	ENST00000583908	ITGB4	P16144	1822 aa		13.11	□□□□□ -0.31
NARF-222	ENST00000583908	MRC1	P22897	1456 aa		13.1	□□□□□ -0.31
NARF-222	ENST00000583908	R3HDM1	Q15032	1099 aa	Known RBP	13.1	□□□□□ -0.31
NARF-222	ENST00000583908	LY75	O60449	1722 aa		13.1	□□□□□ -0.31
NARF-222	ENST00000583908	RNMT	O43148	476 aa	Known RBP	13.09	□□□□□ -0.31
NARF-222	ENST00000583908	HTATSF1	O43719	755 aa	Known RBP	13.09	□□□□□ -0.31
NARF-222	ENST00000583908	LMOD3	Q0VAK6	560 aa		13.09	□□□□□ -0.31
NARF-222	ENST00000583908	SLC52A2	Q9HAB3	445 aa		13.09	□□□□□ -0.31
NARF-222	ENST00000583908	SCN11A	Q9UI33	1791 aa		13.09	□□□□□ -0.31
NARF-222	ENST00000583908	PSD	A5PKW4	1024 aa	Predicted RBP	13.08	□□□□□ -0.32
NARF-222	ENST00000583908	TTC5	Q8N0Z6	440 aa		13.08	□□□□□ -0.32
NARF-222	ENST00000583908	PAPPA	Q13219	1627 aa		13.07	□□□□□ -0.32
NARF-222	ENST00000583908	LOC102724428	A0A0B4J2F2	783 aa		13.07	□□□□□ -0.32
NARF-222	ENST00000583908	SIK1	P57059	783 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms