RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 CRB1P82279 1406 aa12.08□□□□□ -0.48
CASC3-209ENST00000583902 IL16Q14005 1332 aa12.08□□□□□ -0.48
CASC3-209ENST00000583902 HMOX1P09601 288 aa12.07□□□□□ -0.48
CASC3-209ENST00000583902 HSPA1LP34931 641 aa12.07□□□□□ -0.48
CASC3-209ENST00000583902 RAPGEF4Q8WZA2 1011 aa12.07□□□□□ -0.48
CASC3-209ENST00000583902 LTV1Q96GA3 475 aaPredicted RBP12.07□□□□□ -0.48
CASC3-209ENST00000583902 NLRP2Q9NX02 1062 aa12.07□□□□□ -0.48
CASC3-209ENST00000583902 ZNF521Q96K83 1311 aa12.07□□□□□ -0.48
CASC3-209ENST00000583902 PLCH1Q4KWH8 1693 aa12.06□□□□□ -0.48
CASC3-209ENST00000583902 SLIT2O94813 1529 aa12.06□□□□□ -0.48
CASC3-209ENST00000583902 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.06□□□□□ -0.48
CASC3-209ENST00000583902 PARP4Q9UKK3 1724 aaKnown RBP12.06□□□□□ -0.48
CASC3-209ENST00000583902 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
CASC3-209ENST00000583902 CHRNA2Q15822 529 aa12.06□□□□□ -0.48
CASC3-209ENST00000583902 TOM1L2Q6ZVM7 507 aa12.06□□□□□ -0.48
CASC3-209ENST00000583902 CCDC146Q8IYE0 955 aa12.06□□□□□ -0.48
CASC3-209ENST00000583902 AKT1S1Q96B36 256 aa12.06□□□□□ -0.48
CASC3-209ENST00000583902 RGPD2P0DJD1 1756 aa12.05□□□□□ -0.48
CASC3-209ENST00000583902 E9PSI1 815 aa12.05□□□□□ -0.48
CASC3-209ENST00000583902 HSP90AB1P08238 724 aaKnown RBP12.05□□□□□ -0.48
CASC3-209ENST00000583902 TATP17735 454 aaPredicted RBP12.05□□□□□ -0.48
CASC3-209ENST00000583902 RIPK4P57078 832 aa12.05□□□□□ -0.48
CASC3-209ENST00000583902 WWC1Q8IX03 1113 aa12.05□□□□□ -0.48
CASC3-209ENST00000583902 FNBP4Q8N3X1 1017 aaPredicted RBP12.05□□□□□ -0.48
CASC3-209ENST00000583902 BABAM1Q9NWV8 329 aa12.05□□□□□ -0.48
CASC3-209ENST00000583902 BTG4Q9NY30 223 aa12.05□□□□□ -0.48
CASC3-209ENST00000583902 SPG7Q9UQ90 795 aa12.05□□□□□ -0.48
CASC3-209ENST00000583902 DLG5Q8TDM6 1919 aa12.05□□□□□ -0.48
CASC3-209ENST00000583902 NRAPQ86VF7 1730 aa12.05□□□□□ -0.48
CASC3-209ENST00000583902 OVOS2A0A0G2JMS6 1433 aa12.04□□□□□ -0.48
CASC3-209ENST00000583902 RTF1Q92541 710 aaKnown RBP12.04□□□□□ -0.48
CASC3-209ENST00000583902 CT47B1P0C2W7 299 aaPredicted RBP12.03□□□□□ -0.48
CASC3-209ENST00000583902 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
CASC3-209ENST00000583902 AEBP1Q8IUX7 1158 aa12.03□□□□□ -0.48
CASC3-209ENST00000583902 UNC5CLQ8IV45 518 aa12.03□□□□□ -0.48
CASC3-209ENST00000583902 PHACTR3Q96KR7 559 aa12.03□□□□□ -0.48
CASC3-209ENST00000583902 MYH16Q9H6N6 1097 aa12.03□□□□□ -0.48
CASC3-209ENST00000583902 PKD1L3Q7Z443 1732 aa12.03□□□□□ -0.48
CASC3-209ENST00000583902 NUTM2BA6NNL0 878 aaPredicted RBP12.02□□□□□ -0.49
CASC3-209ENST00000583902 GNAT3A8MTJ3 354 aa12.02□□□□□ -0.49
CASC3-209ENST00000583902 NUTM2EB1AL46 878 aaPredicted RBP12.02□□□□□ -0.49
CASC3-209ENST00000583902 PLEKHG5O94827 1062 aa12.02□□□□□ -0.49
CASC3-209ENST00000583902 IL2RBP14784 551 aa12.02□□□□□ -0.49
CASC3-209ENST00000583902 C1orf141Q5JVX7 400 aa12.02□□□□□ -0.49
CASC3-209ENST00000583902 BARGINQ6ZT62 677 aa12.02□□□□□ -0.49
CASC3-209ENST00000583902 NUTM2AQ8IVF1 878 aaPredicted RBP12.02□□□□□ -0.49
CASC3-209ENST00000583902 NGLY1Q96IV0 654 aa12.02□□□□□ -0.49
CASC3-209ENST00000583902 ADAMTS2O95450 1211 aa12.01□□□□□ -0.49
CASC3-209ENST00000583902 VPS72Q15906 364 aa12.01□□□□□ -0.49
CASC3-209ENST00000583902 CHMP4AQ9BY43 222 aa12.01□□□□□ -0.49
CASC3-209ENST00000583902 MAP3K5Q99683 1374 aa12.01□□□□□ -0.49
CASC3-209ENST00000583902 GNAI1P63096 354 aa12□□□□□ -0.49
CASC3-209ENST00000583902 SLFN5Q08AF3 891 aa12□□□□□ -0.49
CASC3-209ENST00000583902 MTHFSDQ2M296 383 aaKnown RBP12□□□□□ -0.49
CASC3-209ENST00000583902 MEX3CQ5U5Q3 659 aaKnown RBP12□□□□□ -0.49
CASC3-209ENST00000583902 LARP1Q6PKG0 1096 aaKnown RBP12□□□□□ -0.49
CASC3-209ENST00000583902 TRMT2AQ8IZ69 625 aaKnown RBP12□□□□□ -0.49
CASC3-209ENST00000583902 IFNL2Q8IZJ0 200 aa12□□□□□ -0.49
CASC3-209ENST00000583902 IFT57Q9NWB7 429 aa12□□□□□ -0.49
CASC3-209ENST00000583902 TRIM35Q9UPQ4 493 aa12□□□□□ -0.49
CASC3-209ENST00000583902 PCDH11XQ9BZA7 1347 aa12□□□□□ -0.49
CASC3-209ENST00000583902 PCDH11YQ9BZA8 1340 aa12□□□□□ -0.49
CASC3-209ENST00000583902 WNK3Q9BYP7 1800 aa12□□□□□ -0.49
CASC3-209ENST00000583902 NEUROD2Q15784 382 aa11.99□□□□□ -0.49
CASC3-209ENST00000583902 ZNF428Q96B54 188 aa11.99□□□□□ -0.49
CASC3-209ENST00000583902 CFAP44Q96MT7 982 aa11.99□□□□□ -0.49
CASC3-209ENST00000583902 STRN4Q9NRL3 753 aa11.99□□□□□ -0.49
CASC3-209ENST00000583902 SOS1Q07889 1333 aaPredicted RBP11.99□□□□□ -0.49
CASC3-209ENST00000583902 SPATA31A1Q5TZJ5 1347 aa11.99□□□□□ -0.49
CASC3-209ENST00000583902 SPATA31A5Q5VU36 1347 aa11.99□□□□□ -0.49
CASC3-209ENST00000583902 SPATA31A7Q8IWB4 1347 aa11.99□□□□□ -0.49
CASC3-209ENST00000583902 ADAMTS7Q9UKP4 1686 aa11.98□□□□□ -0.49
CASC3-209ENST00000583902 BCL9LQ86UU0 1499 aa11.98□□□□□ -0.49
CASC3-209ENST00000583902 SPDYE2BA6NHP3 402 aa11.98□□□□□ -0.49
CASC3-209ENST00000583902 SPDYE6P0CI01 402 aa11.98□□□□□ -0.49
CASC3-209ENST00000583902 SPDYE2Q495Y8 402 aa11.98□□□□□ -0.49
CASC3-209ENST00000583902 ZNF530Q6P9A1 599 aaPredicted RBP11.98□□□□□ -0.49
CASC3-209ENST00000583902 ZCRB1Q8TBF4 217 aaKnown RBP11.98□□□□□ -0.49
CASC3-209ENST00000583902 LRP6O75581 1613 aa11.97□□□□□ -0.49
CASC3-209ENST00000583902 DISP2A7MBM2 1401 aa11.97□□□□□ -0.49
CASC3-209ENST00000583902 CEMIPQ8WUJ3 1361 aa11.97□□□□□ -0.49
CASC3-209ENST00000583902 NKX1-1Q15270 411 aaPredicted RBP11.97□□□□□ -0.49
CASC3-209ENST00000583902 USHBP1Q8N6Y0 703 aa11.97□□□□□ -0.49
CASC3-209ENST00000583902 DCAF5Q96JK2 942 aa11.97□□□□□ -0.49
CASC3-209ENST00000583902 C8orf37Q96NL8 207 aa11.97□□□□□ -0.49
CASC3-209ENST00000583902 USP21Q9UK80 565 aa11.97□□□□□ -0.49
CASC3-209ENST00000583902 TRPC5Q9UL62 973 aaPredicted RBP11.97□□□□□ -0.49
CASC3-209ENST00000583902 RRP7AQ9Y3A4 280 aaKnown RBP11.97□□□□□ -0.49
CASC3-209ENST00000583902 MEGF6O75095 1541 aa11.96□□□□□ -0.49
CASC3-209ENST00000583902 VIRMAQ69YN4 1812 aaKnown RBP11.96□□□□□ -0.49
CASC3-209ENST00000583902 ZNF853P0CG23 659 aa11.96□□□□□ -0.49
CASC3-209ENST00000583902 ZNF772Q68DY9 489 aaPredicted RBP11.96□□□□□ -0.49
CASC3-209ENST00000583902 SCN11AQ9UI33 1791 aa11.96□□□□□ -0.49
CASC3-209ENST00000583902 LRRC37A3O60309 1634 aa11.96□□□□□ -0.5
CASC3-209ENST00000583902 EXOC5O00471 708 aa11.95□□□□□ -0.5
CASC3-209ENST00000583902 DUSP27Q5VZP5 1158 aa11.95□□□□□ -0.5
CASC3-209ENST00000583902 SALL2Q9Y467 1007 aaPredicted RBP11.95□□□□□ -0.5
CASC3-209ENST00000583902 ERVV-2B6SEH9 535 aa11.94□□□□□ -0.5
CASC3-209ENST00000583902 CHL1O00533 1208 aa11.94□□□□□ -0.5
CASC3-209ENST00000583902 PHKG2P15735 406 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms