RNA–Protein interactions for RNA: ENST00000582509.1

TRAPPC8-209, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-209ENST00000582509 ADD1P35611 737 aaKnown RBP10.32□□□□□ -0.76
TRAPPC8-209ENST00000582509 PTGIRP43119 386 aa10.32□□□□□ -0.76
TRAPPC8-209ENST00000582509 OXLD1Q5BKU9 147 aa10.32□□□□□ -0.76
TRAPPC8-209ENST00000582509 ZNF787Q6DD87 383 aa10.32□□□□□ -0.76
TRAPPC8-209ENST00000582509 PIK3CDO00329 1044 aa10.31□□□□□ -0.76
TRAPPC8-209ENST00000582509 SPINT1O43278 529 aa10.31□□□□□ -0.76
TRAPPC8-209ENST00000582509 SCTRP47872 440 aa10.31□□□□□ -0.76
TRAPPC8-209ENST00000582509 RELBQ01201 579 aa10.31□□□□□ -0.76
TRAPPC8-209ENST00000582509 C6orf118Q5T5N4 469 aa10.31□□□□□ -0.76
TRAPPC8-209ENST00000582509 PLEKHM2Q8IWE5 1019 aa10.31□□□□□ -0.76
TRAPPC8-209ENST00000582509 CDCA7Q9BWT1 371 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC8-209ENST00000582509 GNRH1P01148 92 aa10.3□□□□□ -0.76
TRAPPC8-209ENST00000582509 OSBPL3Q9H4L5 887 aa10.3□□□□□ -0.76
TRAPPC8-209ENST00000582509 NOD1Q9Y239 953 aa10.3□□□□□ -0.76
TRAPPC8-209ENST00000582509 USP17L5A8MUK1 530 aa10.29□□□□□ -0.76
TRAPPC8-209ENST00000582509 TSGA10IPQ3SY00 556 aa10.29□□□□□ -0.76
TRAPPC8-209ENST00000582509 AGBL1Q96MI9 1066 aa10.29□□□□□ -0.76
TRAPPC8-209ENST00000582509 UCN2Q96RP3 112 aa10.29□□□□□ -0.76
TRAPPC8-209ENST00000582509 ESCO1Q5FWF5 840 aa10.28□□□□□ -0.76
TRAPPC8-209ENST00000582509 TRIM50Q86XT4 487 aa10.28□□□□□ -0.76
TRAPPC8-209ENST00000582509 NCOA4Q13772 614 aa10.27□□□□□ -0.77
TRAPPC8-209ENST00000582509 TBC1D9Q6ZT07 1266 aa10.27□□□□□ -0.77
TRAPPC8-209ENST00000582509 PPP1R12CQ9BZL4 782 aa10.27□□□□□ -0.77
TRAPPC8-209ENST00000582509 USP17L3A6NCW0 530 aa10.26□□□□□ -0.77
TRAPPC8-209ENST00000582509 USP17L4A6NCW7 530 aa10.26□□□□□ -0.77
TRAPPC8-209ENST00000582509 TTLL8A6PVC2 850 aa10.26□□□□□ -0.77
TRAPPC8-209ENST00000582509 USP17L2Q6R6M4 530 aa10.26□□□□□ -0.77
TRAPPC8-209ENST00000582509 USP17L1Q7RTZ2 530 aa10.26□□□□□ -0.77
TRAPPC8-209ENST00000582509 NLRP3Q96P20 1036 aa10.26□□□□□ -0.77
TRAPPC8-209ENST00000582509 ZNF395Q9H8N7 513 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC8-209ENST00000582509 POLMQ9NP87 494 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC8-209ENST00000582509 SOS2Q07890 1332 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC8-209ENST00000582509 A0A1W2PRU2 124 aa10.25□□□□□ -0.77
TRAPPC8-209ENST00000582509 PALM3A6NDB9 673 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC8-209ENST00000582509 MAN1A2O60476 641 aa10.25□□□□□ -0.77
TRAPPC8-209ENST00000582509 GPC1P35052 558 aa10.25□□□□□ -0.77
TRAPPC8-209ENST00000582509 ATP1A2P50993 1020 aa10.25□□□□□ -0.77
TRAPPC8-209ENST00000582509 CLN3Q13286 438 aa10.25□□□□□ -0.77
TRAPPC8-209ENST00000582509 KDF1Q8NAX2 398 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC8-209ENST00000582509 TFIP11Q9UBB9 837 aaKnown RBP10.25□□□□□ -0.77
TRAPPC8-209ENST00000582509 INSM2Q96T92 566 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC8-209ENST00000582509 POTECB2RU33 542 aa10.23□□□□□ -0.77
TRAPPC8-209ENST00000582509 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.23□□□□□ -0.77
TRAPPC8-209ENST00000582509 CCDC97Q96F63 343 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC8-209ENST00000582509 ARHGEF10LQ9HCE6 1279 aa10.23□□□□□ -0.77
TRAPPC8-209ENST00000582509 SERPINA10Q9UK55 444 aa10.23□□□□□ -0.77
TRAPPC8-209ENST00000582509 MAFBQ9Y5Q3 323 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC8-209ENST00000582509 MEN1O00255 615 aa10.22□□□□□ -0.77
TRAPPC8-209ENST00000582509 SNRPBP14678 240 aaKnown RBP10.22□□□□□ -0.77
TRAPPC8-209ENST00000582509 RNF144AP50876 292 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC8-209ENST00000582509 DEPDC4Q8N2C3 294 aa10.22□□□□□ -0.77
TRAPPC8-209ENST00000582509 ESYT1Q9BSJ8 1104 aa10.22□□□□□ -0.77
TRAPPC8-209ENST00000582509 WASLO00401 505 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC8-209ENST00000582509 CTSOP43234 321 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC8-209ENST00000582509 GTF2IP78347 998 aa10.21□□□□□ -0.77
TRAPPC8-209ENST00000582509 GTF2E1P29083 439 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC8-209ENST00000582509 PSME1Q06323 249 aa10.2□□□□□ -0.78
TRAPPC8-209ENST00000582509 CNKSR1Q969H4 720 aa10.2□□□□□ -0.78
TRAPPC8-209ENST00000582509 XAGE2Q96GT9 111 aa10.2□□□□□ -0.78
TRAPPC8-209ENST00000582509 MKRN1Q9UHC7 482 aaKnown RBP10.2□□□□□ -0.78
TRAPPC8-209ENST00000582509 LMOD1P29536 600 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC8-209ENST00000582509 SLC27A3Q5K4L6 730 aa10.19□□□□□ -0.78
TRAPPC8-209ENST00000582509 RNF217Q8TC41 542 aa10.19□□□□□ -0.78
TRAPPC8-209ENST00000582509 RBM19Q9Y4C8 960 aaKnown RBP10.19□□□□□ -0.78
TRAPPC8-209ENST00000582509 PCDHGA11Q9Y5H2 935 aa10.19□□□□□ -0.78
TRAPPC8-209ENST00000582509 BACH1O14867 736 aa10.18□□□□□ -0.78
TRAPPC8-209ENST00000582509 LYSMD3Q7Z3D4 306 aa10.18□□□□□ -0.78
TRAPPC8-209ENST00000582509 LARGE2Q8N3Y3 721 aa10.18□□□□□ -0.78
TRAPPC8-209ENST00000582509 DNMT3LQ9UJW3 386 aa10.18□□□□□ -0.78
TRAPPC8-209ENST00000582509 INHAP05111 366 aa10.17□□□□□ -0.78
TRAPPC8-209ENST00000582509 GDF10P55107 478 aa10.17□□□□□ -0.78
TRAPPC8-209ENST00000582509 FOXD4L5Q5VV16 416 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC8-209ENST00000582509 VRTNQ9H8Y1 702 aa10.17□□□□□ -0.78
TRAPPC8-209ENST00000582509 ETNK1Q9HBU6 452 aa10.17□□□□□ -0.78
TRAPPC8-209ENST00000582509 RAB6BQ9NRW1 208 aa10.17□□□□□ -0.78
TRAPPC8-209ENST00000582509 DNAAF2Q9NVR5 837 aaKnown RBP10.17□□□□□ -0.78
TRAPPC8-209ENST00000582509 FIGNL2A6NMB9 653 aa10.16□□□□□ -0.78
TRAPPC8-209ENST00000582509 IL2RAP01589 272 aa10.16□□□□□ -0.78
TRAPPC8-209ENST00000582509 LARP1Q6PKG0 1096 aaKnown RBP10.16□□□□□ -0.78
TRAPPC8-209ENST00000582509 OGFOD1Q8N543 542 aa10.16□□□□□ -0.78
TRAPPC8-209ENST00000582509 SCNN1DP51172 638 aa10.15□□□□□ -0.78
TRAPPC8-209ENST00000582509 CENPCQ03188 943 aa10.15□□□□□ -0.78
TRAPPC8-209ENST00000582509 CFAP70Q5T0N1 1121 aa10.15□□□□□ -0.78
TRAPPC8-209ENST00000582509 NPAS3Q8IXF0 933 aa10.15□□□□□ -0.78
TRAPPC8-209ENST00000582509 GRIP2Q9C0E4 1043 aa10.15□□□□□ -0.78
TRAPPC8-209ENST00000582509 TIMELESSQ9UNS1 1208 aa10.15□□□□□ -0.78
TRAPPC8-209ENST00000582509 ARID3CA6NKF2 412 aa10.14□□□□□ -0.79
TRAPPC8-209ENST00000582509 RASA1P20936 1047 aa10.14□□□□□ -0.79
TRAPPC8-209ENST00000582509 WDR44Q5JSH3 913 aa10.14□□□□□ -0.79
TRAPPC8-209ENST00000582509 ZSCAN10Q96SZ4 725 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC8-209ENST00000582509 HRH3Q9Y5N1 445 aa10.14□□□□□ -0.79
TRAPPC8-209ENST00000582509 TLR1Q15399 786 aa10.13□□□□□ -0.79
TRAPPC8-209ENST00000582509 CCDC102BQ68D86 513 aa10.13□□□□□ -0.79
TRAPPC8-209ENST00000582509 SIX5Q8N196 739 aa10.13□□□□□ -0.79
TRAPPC8-209ENST00000582509 SLC4A9Q96Q91 983 aa10.13□□□□□ -0.79
TRAPPC8-209ENST00000582509 NXF1Q9UBU9 619 aaKnown RBP10.13□□□□□ -0.79
TRAPPC8-209ENST00000582509 FAM196BA6NMK8 535 aa10.12□□□□□ -0.79
TRAPPC8-209ENST00000582509 SOBPA7XYQ1 873 aa10.12□□□□□ -0.79
TRAPPC8-209ENST00000582509 TMEM229AB2RXF0 380 aa10.12□□□□□ -0.79
TRAPPC8-209ENST00000582509 SPATA31C2B4DYI2 1134 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms